Gene annotation
Transcriptome id Sobic.002G177800.2
Synonym Sb02g022650
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt C5XAK7
Pfam PF13855 PF07714 PF12819
Panther DB PTHR27003 PTHR27003:SF45
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006468protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G29990 : Leucine-rich repeat transmembrane protein kinase protein
RAP-DB (Rice) LOC_Os09g19140.1 : senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a046621 , Zm00025a046625
Brachypodium PNT64438
Barley HORVU5Hr1G041660.4 , HORVU5Hr1G041660.5 , HORVU5Hr1G041660.6 , HORVU5Hr1G041660.7 , HORVU5Hr1G041660.1 , HORVU5Hr1G041660.2 , HORVU5Hr1G041660.3 , HORVU5Hr1G041660.8 , HORVU5Hr1G041660.9 , HORVU5Hr1G041660.12 , HORVU5Hr1G041660.10 , HORVU5Hr1G041660.11
Wheat TraesCS5D02G193500 , TraesCS5D02G193800 , TraesCS5A02G197200 , TraesCS5A02G197300 , TraesCS6D02G345600 , TraesCS5B02G186400 , TraesCS5D02G193700 , TraesCS5B02G186300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G178000 senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed -
2 Sobic.009G084400 transporter family protein, putative, expressed -
3 Sobic.002G274600 glycosyl transferase family 8 protein, expressed -
4 Sobic.008G037900 transcription factor, putative, expressed K14431: transcription factor TGA
5 Sobic.001G454900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MATE efflux protein, putative, expressed -
6 Sobic.002G197000 cytochrome P450 72A1, putative, expressed K10717: cytokinin trans-hydroxylase
7 Sobic.006G085700 OsPDIL1-2 protein disulfide isomerase PDIL1-2, expressed K09580: PDIA1, protein disulfide-isomerase A1
8 Sobic.001G327200 expressed protein -
9 Sobic.005G119900 reticuline oxidase-like protein precursor, putative, expressed -
10 Sobic.003G357700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Laccase LAC7 (At)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
11 Sobic.003G441700 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
12 Sobic.009G055300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.001G539200 expressed protein -
14 Sobic.006G230200 TKL_IRAK_DUF26-ld.1 - DUF26 kinases have homology to DUF26 containing loci, expressed -
15 Sobic.010G045400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@AMP-binding enzyme, putative, expressed K01897: ACSL, long-chain acyl-CoA synthetase
16 Sobic.008G105800 cytochrome P450, putative, expressed -
17 Sobic.001G348400 expressed protein -
18 Sobic.005G216400 plant protein of unknown function domain containing protein, expressed -
19 Sobic.001G231800 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
20 Sobic.002G063700 NB-ARC domain containing protein, expressed -


Gene co-expression network
sample Sobic002G177800 Sobic002G177800 Sobic002G178000 Sobic002G178000 Sobic002G177800--Sobic002G178000 Sobic009G084400 Sobic009G084400 Sobic002G177800--Sobic009G084400 Sobic002G274600 Sobic002G274600 Sobic002G177800--Sobic002G274600 Sobic008G037900 Sobic008G037900 Sobic002G177800--Sobic008G037900 Sobic001G454900 Sobic001G454900 Sobic002G177800--Sobic001G454900 Sobic002G197000 Sobic002G197000 Sobic002G177800--Sobic002G197000 Sobic006G085700 Sobic006G085700 Sobic002G177800--Sobic006G085700 Sobic001G327200 Sobic001G327200 Sobic002G177800--Sobic001G327200 Sobic005G119900 Sobic005G119900 Sobic002G177800--Sobic005G119900 Sobic002G178101 Sobic002G178101 Sobic002G178000--Sobic002G178101 Sobic005G220300 Sobic005G220300 Sobic002G178000--Sobic005G220300 Sobic005G216400 Sobic005G216400 Sobic002G178000--Sobic005G216400 Sobic005G162400 Sobic005G162400 Sobic002G178000--Sobic005G162400 Sobic006G121000 Sobic006G121000 Sobic002G178000--Sobic006G121000 Sobic003G443700 Sobic003G443700 Sobic002G178000--Sobic003G443700 Sobic005G060200 Sobic005G060200 Sobic002G178000--Sobic005G060200 Sobic003G357700 Sobic003G357700 Sobic002G178000--Sobic003G357700 Sobic002G178200 Sobic002G178200 Sobic002G178000--Sobic002G178200 Sobic009G084400--Sobic002G197000 Sobic002G029500 Sobic002G029500 Sobic009G084400--Sobic002G029500 Sobic010G213600 Sobic010G213600 Sobic009G084400--Sobic010G213600 Sobic009G084400--Sobic002G274600 Sobic002G391300 Sobic002G391300 Sobic009G084400--Sobic002G391300 Sobic005G134200 Sobic005G134200 Sobic009G084400--Sobic005G134200 Sobic005G226400 Sobic005G226400 Sobic009G084400--Sobic005G226400 Sobic006G092100 Sobic006G092100 Sobic009G084400--Sobic006G092100 Sobic006G171100 Sobic006G171100 Sobic009G084400--Sobic006G171100 Sobic002G274600--Sobic009G084400 Sobic002G274600--Sobic002G197000 Sobic004G079900 Sobic004G079900 Sobic002G274600--Sobic004G079900 Sobic010G010000 Sobic010G010000 Sobic002G274600--Sobic010G010000 Sobic004G014600 Sobic004G014600 Sobic002G274600--Sobic004G014600 Sobic001G218400 Sobic001G218400 Sobic002G274600--Sobic001G218400 Sobic002G029600 Sobic002G029600 Sobic002G274600--Sobic002G029600 Sobic002G274600--Sobic006G171100 Sobic005G106300 Sobic005G106300 Sobic002G274600--Sobic005G106300 Sobic010G097200 Sobic010G097200 Sobic008G037900--Sobic010G097200 Sobic007G220400 Sobic007G220400 Sobic008G037900--Sobic007G220400 Sobic006G205700 Sobic006G205700 Sobic008G037900--Sobic006G205700 Sobic002G111900 Sobic002G111900 Sobic008G037900--Sobic002G111900 Sobic010G241900 Sobic010G241900 Sobic008G037900--Sobic010G241900 Sobic009G065700 Sobic009G065700 Sobic008G037900--Sobic009G065700 Sobic003G441800 Sobic003G441800 Sobic008G037900--Sobic003G441800 Sobic003G167300 Sobic003G167300 Sobic008G037900--Sobic003G167300 Sobic002G391400 Sobic002G391400 Sobic008G037900--Sobic002G391400 Sobic006G097900 Sobic006G097900 Sobic001G454900--Sobic006G097900 Sobic010G268700 Sobic010G268700 Sobic001G454900--Sobic010G268700 Sobic010G152500 Sobic010G152500 Sobic001G454900--Sobic010G152500 Sobic007G111800 Sobic007G111800 Sobic001G454900--Sobic007G111800 Sobic001G454900--Sobic006G085700 Sobic004G009200 Sobic004G009200 Sobic001G454900--Sobic004G009200 Sobic007G193200 Sobic007G193200 Sobic001G454900--Sobic007G193200 Sobic003G382200 Sobic003G382200 Sobic001G454900--Sobic003G382200 Sobic002G391900 Sobic002G391900 Sobic001G454900--Sobic002G391900 Sobic002G197000--Sobic009G084400 Sobic002G197000--Sobic002G029500 Sobic002G197000--Sobic002G274600 Sobic006G230100 Sobic006G230100 Sobic002G197000--Sobic006G230100 Sobic007G064900 Sobic007G064900 Sobic002G197000--Sobic007G064900 Sobic002G197000--Sobic006G092100 Sobic004G299500 Sobic004G299500 Sobic002G197000--Sobic004G299500 Sobic002G197000--Sobic005G226400 Sobic006G059800 Sobic006G059800 Sobic002G197000--Sobic006G059800 Sobic003G282300 Sobic003G282300 Sobic006G085700--Sobic003G282300 Sobic006G031100 Sobic006G031100 Sobic006G085700--Sobic006G031100 Sobic007G090600 Sobic007G090600 Sobic006G085700--Sobic007G090600 Sobic002G146000 Sobic002G146000 Sobic006G085700--Sobic002G146000 Sobic006G085700--Sobic004G014600 Sobic003G140200 Sobic003G140200 Sobic006G085700--Sobic003G140200 Sobic006G085700--Sobic003G441800 Sobic005G182800 Sobic005G182800 Sobic006G085700--Sobic005G182800 Sobic006G085700--Sobic010G152500 Sobic001G327200--Sobic009G084400 Sobic001G327200--Sobic002G197000 Sobic001G327200--Sobic006G171100 Sobic001G327200--Sobic002G274600 Sobic001G153100 Sobic001G153100 Sobic001G327200--Sobic001G153100 Sobic008G105800 Sobic008G105800 Sobic001G327200--Sobic008G105800 Sobic005G069166 Sobic005G069166 Sobic001G327200--Sobic005G069166 Sobic001G327200--Sobic006G230100 Sobic005G069332 Sobic005G069332 Sobic001G327200--Sobic005G069332 Sobic003G441700 Sobic003G441700 Sobic005G119900--Sobic003G441700 Sobic001G301000 Sobic001G301000 Sobic005G119900--Sobic001G301000 Sobic001G181600 Sobic001G181600 Sobic005G119900--Sobic001G181600 Sobic004G121600 Sobic004G121600 Sobic005G119900--Sobic004G121600 Sobic005G119900--Sobic003G441800 Sobic003G053200 Sobic003G053200 Sobic005G119900--Sobic003G053200 Sobic003G154500 Sobic003G154500 Sobic005G119900--Sobic003G154500 Sobic009G055300 Sobic009G055300 Sobic005G119900--Sobic009G055300 Sobic001G231800 Sobic001G231800 Sobic005G119900--Sobic001G231800
Octagon: transcription factors


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