Gene annotation
Transcriptome id Sobic.003G236800.1
Synonym BASS, Sb03g029420
Functional annotation - (PubMedID : 26976818)
bile acid sodium symporter family protein, putative, expressed
UniProt C5XF55
Pfam PF13593
Panther DB PTHR10361 PTHR10361:SF35
NCBI CDD KOG2718; Na+-bile acid cotransporter
KEGG Orthology K03453; bile acid:Na+ symporter, BASS family
Gene Ontology GO:0016020; membrane


Orthologs (automatic annotation)
TAIR AT2G26900 : Sodium Bile acid symporter family
RAP-DB (Rice) LOC_Os01g45750.1 : bile acid sodium symporter family protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQK08958
Barley -
Wheat TraesCS3B02G262000 , TraesCS3B02G262000 , TraesCS3A02G232700 , TraesCS3A02G232700
Populus -


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cDNA sequences
Sobic.003G236800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G259401 - K06130: lysophospholipase II
2 Sobic.003G045600 aminotransferase, classes I and II, domain containing protein, expressed -
3 Sobic.002G117600 myosin, putative, expressed K10357: myosin V
4 Sobic.002G408800 protein kinase family protein, putative, expressed K08819: cyclin-dependent kinase 12/13
5 Sobic.007G120800 puromycin-sensitive aminopeptidase, putative, expressed K08776: puromycin-sensitive aminopeptidase
6 Sobic.007G119800 ABC transporter, ATP-binding protein, putative, expressed -
7 Sobic.008G151500 EXS family protein, putative, expressed -
8 Sobic.007G179900 6-phosphogluconolactonase, putative, expressed K01057: PGLS, pgl, 6-phosphogluconolactonase
9 Sobic.001G380600 insulin-degrading enzyme, putative, expressed K01411: nardilysin
10 Sobic.009G083800 MYB family transcription factor, putative, expressed -
11 Sobic.K043400 dnaJ homolog subfamily C member, putative, expressed K09523: DnaJ homolog subfamily C member 3
12 Sobic.002G283100 josephin, putative, expressed -
13 Sobic.004G212100 PPR repeat domain containing protein, putative, expressed -
14 Sobic.001G161700 vesicle-fusing ATPase, putative, expressed K06027: NSF, vesicle-fusing ATPase
15 Sobic.001G486900 exostosin family protein, putative, expressed -
16 Sobic.007G208000 geranylgeranyl transferase type-2 subunit beta, putative, expressed K05956: geranylgeranyl transferase type-2 subunit beta
17 Sobic.001G445500 coatomer subunit gamma-1, putative, expressed K17267: coatomer subunit gamma
18 Sobic.002G055200 GTP binding protein, putative, expressed -
19 Sobic.002G070300 expressed protein -
20 Sobic.001G205100 expressed protein -


Gene co-expression network
sample Sobic003G236800 Sobic003G236800 Sobic006G259401 Sobic006G259401 Sobic003G236800--Sobic006G259401 Sobic003G045600 Sobic003G045600 Sobic003G236800--Sobic003G045600 Sobic002G117600 Sobic002G117600 Sobic003G236800--Sobic002G117600 Sobic002G408800 Sobic002G408800 Sobic003G236800--Sobic002G408800 Sobic007G120800 Sobic007G120800 Sobic003G236800--Sobic007G120800 Sobic007G119800 Sobic007G119800 Sobic003G236800--Sobic007G119800 Sobic008G151500 Sobic008G151500 Sobic003G236800--Sobic008G151500 Sobic007G179900 Sobic007G179900 Sobic003G236800--Sobic007G179900 Sobic001G380600 Sobic001G380600 Sobic003G236800--Sobic001G380600 Sobic006G259401--Sobic003G045600 Sobic006G259401--Sobic008G151500 Sobic006G259401--Sobic003G236800 Sobic002G101300 Sobic002G101300 Sobic006G259401--Sobic002G101300 Sobic006G259401--Sobic007G120800 Sobic001G140000 Sobic001G140000 Sobic006G259401--Sobic001G140000 Sobic002G283100 Sobic002G283100 Sobic006G259401--Sobic002G283100 Sobic001G392200 Sobic001G392200 Sobic006G259401--Sobic001G392200 Sobic006G259401--Sobic007G179900 Sobic003G045600--Sobic006G259401 Sobic003G045600--Sobic003G236800 Sobic003G045600--Sobic002G101300 Sobic004G079700 Sobic004G079700 Sobic003G045600--Sobic004G079700 Sobic002G153100 Sobic002G153100 Sobic003G045600--Sobic002G153100 Sobic003G045600--Sobic001G140000 Sobic003G045600--Sobic007G119800 Sobic002G274600 Sobic002G274600 Sobic003G045600--Sobic002G274600 Sobic003G045600--Sobic008G151500 Sobic008G097900 Sobic008G097900 Sobic002G117600--Sobic008G097900 Sobic003G190200 Sobic003G190200 Sobic002G117600--Sobic003G190200 SobicK043400 SobicK043400 Sobic002G117600--SobicK043400 Sobic004G077300 Sobic004G077300 Sobic002G117600--Sobic004G077300 Sobic001G501900 Sobic001G501900 Sobic002G117600--Sobic001G501900 Sobic001G378800 Sobic001G378800 Sobic002G117600--Sobic001G378800 Sobic010G171000 Sobic010G171000 Sobic002G117600--Sobic010G171000 Sobic007G172700 Sobic007G172700 Sobic002G117600--Sobic007G172700 Sobic001G411900 Sobic001G411900 Sobic002G117600--Sobic001G411900 Sobic002G408800--Sobic007G120800 Sobic003G029600 Sobic003G029600 Sobic002G408800--Sobic003G029600 Sobic002G029300 Sobic002G029300 Sobic002G408800--Sobic002G029300 Sobic009G049400 Sobic009G049400 Sobic002G408800--Sobic009G049400 Sobic005G074100 Sobic005G074100 Sobic002G408800--Sobic005G074100 Sobic001G322000 Sobic001G322000 Sobic002G408800--Sobic001G322000 Sobic006G056200 Sobic006G056200 Sobic002G408800--Sobic006G056200 Sobic009G231700 Sobic009G231700 Sobic002G408800--Sobic009G231700 Sobic010G216000 Sobic010G216000 Sobic002G408800--Sobic010G216000 Sobic007G120800--Sobic002G408800 Sobic007G120800--Sobic002G029300 Sobic002G194800 Sobic002G194800 Sobic007G120800--Sobic002G194800 Sobic007G120800--Sobic006G056200 Sobic008G156300 Sobic008G156300 Sobic007G120800--Sobic008G156300 Sobic007G173700 Sobic007G173700 Sobic007G120800--Sobic007G173700 Sobic001G161700 Sobic001G161700 Sobic007G120800--Sobic001G161700 Sobic007G120800--Sobic006G259401 Sobic007G065500 Sobic007G065500 Sobic007G120800--Sobic007G065500 Sobic003G017601 Sobic003G017601 Sobic007G119800--Sobic003G017601 Sobic001G218500 Sobic001G218500 Sobic007G119800--Sobic001G218500 Sobic004G161900 Sobic004G161900 Sobic007G119800--Sobic004G161900 Sobic007G120000 Sobic007G120000 Sobic007G119800--Sobic007G120000 Sobic005G075600 Sobic005G075600 Sobic007G119800--Sobic005G075600 Sobic003G020500 Sobic003G020500 Sobic007G119800--Sobic003G020500 Sobic007G193200 Sobic007G193200 Sobic007G119800--Sobic007G193200 Sobic010G045400 Sobic010G045400 Sobic007G119800--Sobic010G045400 Sobic001G454900 Sobic001G454900 Sobic007G119800--Sobic001G454900 Sobic001G443200 Sobic001G443200 Sobic008G151500--Sobic001G443200 Sobic001G220900 Sobic001G220900 Sobic008G151500--Sobic001G220900 Sobic008G151500--SobicK043400 Sobic008G151500--Sobic006G259401 Sobic004G000100 Sobic004G000100 Sobic008G151500--Sobic004G000100 Sobic001G458800 Sobic001G458800 Sobic008G151500--Sobic001G458800 Sobic003G034900 Sobic003G034900 Sobic008G151500--Sobic003G034900 Sobic002G070300 Sobic002G070300 Sobic008G151500--Sobic002G070300 Sobic002G295700 Sobic002G295700 Sobic008G151500--Sobic002G295700 Sobic007G179900--SobicK043400 Sobic007G179900--Sobic008G151500 Sobic007G179900--Sobic006G259401 Sobic007G179900--Sobic003G236800 Sobic008G102600 Sobic008G102600 Sobic007G179900--Sobic008G102600 Sobic007G179900--Sobic001G443200 Sobic007G179900--Sobic002G295700 Sobic007G179900--Sobic001G458800 Sobic003G196200 Sobic003G196200 Sobic007G179900--Sobic003G196200 Sobic002G071100 Sobic002G071100 Sobic001G380600--Sobic002G071100 Sobic004G174700 Sobic004G174700 Sobic001G380600--Sobic004G174700 Sobic001G011000 Sobic001G011000 Sobic001G380600--Sobic001G011000 Sobic001G455000 Sobic001G455000 Sobic001G380600--Sobic001G455000 Sobic010G192600 Sobic010G192600 Sobic001G380600--Sobic010G192600 Sobic002G070600 Sobic002G070600 Sobic001G380600--Sobic002G070600 Sobic003G397900 Sobic003G397900 Sobic001G380600--Sobic003G397900 Sobic001G380600--Sobic002G117600 Sobic007G118500 Sobic007G118500 Sobic001G380600--Sobic007G118500
Octagon: transcription factors


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