Gene annotation
Transcriptome id Sobic.002G055200.1
Synonym Sb02g004623
Functional annotation GTP binding protein, putative, expressed
UniProt C5XB34
Pfam PF02841 PF02263
Panther DB PTHR10751 PTHR10751:SF38
NCBI CDD KOG2037; Guanylate-binding protein
KEGG Orthology -
Gene Ontology GO:0005525; GTP binding GO:0003924GTPase activity


Orthologs (automatic annotation)
TAIR AT2G38840 : Guanylate-binding family protein
RAP-DB (Rice) LOC_Os07g08400.1 : GTP binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a045185 , Zm00025a016572 , Zm00025a008565
Brachypodium PNT76902 , PNT76903 , PNT76906 , PNT76907 , PNT76904 , PNT76905 , KQK20582 , KQK20583
Barley HORVU5Hr1G109660.28 , HORVU5Hr1G109660.22 , HORVU5Hr1G109660.23 , HORVU5Hr1G109660.20 , HORVU5Hr1G109660.21 , HORVU5Hr1G109660.26 , HORVU5Hr1G109660.27 , HORVU5Hr1G109660.24 , HORVU5Hr1G109660.25 , HORVU6Hr1G014870.1 , HORVU6Hr1G014870.2 , HORVU5Hr1G109660.13 , HORVU5Hr1G109660.12 , HORVU5Hr1G109660.11 , HORVU5Hr1G109660.10 , HORVU5Hr1G109660.17 , HORVU5Hr1G109660.16 , HORVU5Hr1G109660.15 , HORVU5Hr1G109660.14 , HORVU5Hr1G109660.19 , HORVU5Hr1G109660.18 , HORVU5Hr1G109660.3 , HORVU5Hr1G109660.2 , HORVU5Hr1G109660.1 , HORVU5Hr1G109660.7 , HORVU5Hr1G109660.6 , HORVU5Hr1G109660.5 , HORVU5Hr1G109660.4 , HORVU5Hr1G109660.9 , HORVU5Hr1G109660.8
Wheat TraesCS5B02G466100 , TraesCS5A02G457000 , TraesCS5A02G457100 , TraesCS5D02G467800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.K043400 dnaJ homolog subfamily C member, putative, expressed K09523: DnaJ homolog subfamily C member 3
2 Sobic.001G188900 expressed protein -
3 Sobic.001G047600 2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed K00627: DLAT, aceF, pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase)
4 Sobic.009G083800 MYB family transcription factor, putative, expressed -
5 Sobic.002G117600 myosin, putative, expressed K10357: myosin V
6 Sobic.003G236800 -(PubMedID : 26976818)@bile acid sodium symporter family protein, putative, expressed K03453: bile acid:Na+ symporter, BASS family
7 Sobic.007G127500 - -
8 Sobic.004G130400 OsPOP5 - Putative Prolyl Oligopeptidase homologue, expressed K01278: DPP4, dipeptidyl-peptidase 4
9 Sobic.003G034900 mitochondrial-processing peptidase subunit alpha, mitochondrial precursor, putative, expressed K01412: PMPCA, mitochondrial-processing peptidase subunit alpha
10 Sobic.004G093600 2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed K00627: DLAT, aceF, pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase)
11 Sobic.001G465900 adenylyl-sulfate kinase, putative, expressed K00860: adenylylsulfate kinase
12 Sobic.001G140000 early-responsive to dehydration protein-related, putative, expressed -
13 Sobic.008G023300 stripe rust resistance protein Yr10, putative, expressed -
14 Sobic.008G097900 protein kinase domain containing protein, expressed -
15 Sobic.001G458800 mitochondrial-processing peptidase subunit, mitochondrial precursor, putative, expressed K17732: PMPCB, mitochondrial-processing peptidase subunit beta
16 Sobic.003G129900 dehydrogenase, putative, expressed K00030: isocitrate dehydrogenase (NAD+)
17 Sobic.007G127550 - -
18 Sobic.001G378800 fumarate hydratase, mitochondrial precursor, putative, expressed K01679: E4.2.1.2B, fumC, fumarate hydratase, class II
19 Sobic.003G156400 OsPDIL2-2 protein disulfide isomerase PDIL2-2, expressed K09584: PDIA6, protein disulfide-isomerase A6
20 Sobic.002G070300 expressed protein -


Gene co-expression network
sample Sobic002G055200 Sobic002G055200 SobicK043400 SobicK043400 Sobic002G055200--SobicK043400 Sobic001G188900 Sobic001G188900 Sobic002G055200--Sobic001G188900 Sobic001G047600 Sobic001G047600 Sobic002G055200--Sobic001G047600 Sobic009G083800 Sobic009G083800 Sobic002G055200--Sobic009G083800 Sobic002G117600 Sobic002G117600 Sobic002G055200--Sobic002G117600 Sobic003G236800 Sobic003G236800 Sobic002G055200--Sobic003G236800 Sobic007G127500 Sobic007G127500 Sobic002G055200--Sobic007G127500 Sobic004G130400 Sobic004G130400 Sobic002G055200--Sobic004G130400 Sobic003G034900 Sobic003G034900 Sobic002G055200--Sobic003G034900 Sobic001G378800 Sobic001G378800 SobicK043400--Sobic001G378800 SobicK043400--Sobic001G047600 Sobic009G054600 Sobic009G054600 SobicK043400--Sobic009G054600 Sobic002G295700 Sobic002G295700 SobicK043400--Sobic002G295700 SobicK043400--Sobic002G117600 Sobic006G012700 Sobic006G012700 SobicK043400--Sobic006G012700 Sobic010G065200 Sobic010G065200 SobicK043400--Sobic010G065200 Sobic004G093600 Sobic004G093600 SobicK043400--Sobic004G093600 Sobic004G096700 Sobic004G096700 SobicK043400--Sobic004G096700 Sobic003G156400 Sobic003G156400 Sobic001G188900--Sobic003G156400 Sobic001G188900--Sobic004G130400 Sobic003G338500 Sobic003G338500 Sobic001G188900--Sobic003G338500 Sobic007G075500 Sobic007G075500 Sobic001G188900--Sobic007G075500 Sobic001G205100 Sobic001G205100 Sobic001G188900--Sobic001G205100 Sobic003G212100 Sobic003G212100 Sobic001G188900--Sobic003G212100 Sobic002G405400 Sobic002G405400 Sobic001G188900--Sobic002G405400 Sobic009G224000 Sobic009G224000 Sobic001G188900--Sobic009G224000 Sobic009G235600 Sobic009G235600 Sobic001G188900--Sobic009G235600 Sobic001G047600--Sobic004G093600 Sobic001G047600--Sobic001G378800 Sobic003G058500 Sobic003G058500 Sobic001G047600--Sobic003G058500 Sobic001G047600--Sobic003G034900 Sobic001G047600--Sobic006G012700 Sobic001G047600--SobicK043400 Sobic001G047600--Sobic003G156400 Sobic001G465400 Sobic001G465400 Sobic001G047600--Sobic001G465400 Sobic007G118500 Sobic007G118500 Sobic001G047600--Sobic007G118500 Sobic002G070300 Sobic002G070300 Sobic009G083800--Sobic002G070300 Sobic008G132200 Sobic008G132200 Sobic009G083800--Sobic008G132200 Sobic007G048700 Sobic007G048700 Sobic009G083800--Sobic007G048700 Sobic003G169900 Sobic003G169900 Sobic009G083800--Sobic003G169900 Sobic009G083800--Sobic003G236800 Sobic001G458800 Sobic001G458800 Sobic009G083800--Sobic001G458800 Sobic001G392200 Sobic001G392200 Sobic009G083800--Sobic001G392200 Sobic009G083800--Sobic002G055200 Sobic003G196200 Sobic003G196200 Sobic009G083800--Sobic003G196200 Sobic008G097900 Sobic008G097900 Sobic002G117600--Sobic008G097900 Sobic003G190200 Sobic003G190200 Sobic002G117600--Sobic003G190200 Sobic002G117600--SobicK043400 Sobic004G077300 Sobic004G077300 Sobic002G117600--Sobic004G077300 Sobic001G501900 Sobic001G501900 Sobic002G117600--Sobic001G501900 Sobic002G117600--Sobic001G378800 Sobic010G171000 Sobic010G171000 Sobic002G117600--Sobic010G171000 Sobic007G172700 Sobic007G172700 Sobic002G117600--Sobic007G172700 Sobic001G411900 Sobic001G411900 Sobic002G117600--Sobic001G411900 Sobic006G259401 Sobic006G259401 Sobic003G236800--Sobic006G259401 Sobic003G045600 Sobic003G045600 Sobic003G236800--Sobic003G045600 Sobic003G236800--Sobic002G117600 Sobic002G408800 Sobic002G408800 Sobic003G236800--Sobic002G408800 Sobic007G120800 Sobic007G120800 Sobic003G236800--Sobic007G120800 Sobic007G119800 Sobic007G119800 Sobic003G236800--Sobic007G119800 Sobic008G151500 Sobic008G151500 Sobic003G236800--Sobic008G151500 Sobic007G179900 Sobic007G179900 Sobic003G236800--Sobic007G179900 Sobic001G380600 Sobic001G380600 Sobic003G236800--Sobic001G380600 Sobic008G023300 Sobic008G023300 Sobic007G127500--Sobic008G023300 Sobic010G089600 Sobic010G089600 Sobic007G127500--Sobic010G089600 Sobic007G127550 Sobic007G127550 Sobic007G127500--Sobic007G127550 Sobic010G250300 Sobic010G250300 Sobic007G127500--Sobic010G250300 Sobic003G187700 Sobic003G187700 Sobic007G127500--Sobic003G187700 Sobic001G213666 Sobic001G213666 Sobic007G127500--Sobic001G213666 Sobic006G256000 Sobic006G256000 Sobic007G127500--Sobic006G256000 Sobic001G342101 Sobic001G342101 Sobic007G127500--Sobic001G342101 Sobic010G189432 Sobic010G189432 Sobic007G127500--Sobic010G189432 Sobic004G130400--Sobic001G205100 Sobic009G162100 Sobic009G162100 Sobic004G130400--Sobic009G162100 Sobic005G177700 Sobic005G177700 Sobic004G130400--Sobic005G177700 Sobic004G130400--Sobic009G224000 Sobic004G130400--Sobic001G047600 Sobic003G394200 Sobic003G394200 Sobic004G130400--Sobic003G394200 Sobic004G130400--Sobic001G411900 Sobic004G130400--Sobic008G097900 Sobic004G078700 Sobic004G078700 Sobic004G130400--Sobic004G078700 Sobic003G034900--Sobic001G458800 Sobic003G034900--Sobic001G465400 Sobic003G034900--Sobic004G093600 Sobic001G115700 Sobic001G115700 Sobic003G034900--Sobic001G115700 Sobic003G034900--Sobic001G047600 Sobic007G171500 Sobic007G171500 Sobic003G034900--Sobic007G171500 Sobic009G224400 Sobic009G224400 Sobic003G034900--Sobic009G224400 Sobic004G347600 Sobic004G347600 Sobic003G034900--Sobic004G347600 Sobic001G457000 Sobic001G457000 Sobic003G034900--Sobic001G457000
Octagon: transcription factors


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