Gene annotation
Transcriptome id Sobic.007G127550.1
Synonym -
Functional annotation -
UniProt A0A1Z5R9J2
Pfam PF03171
Panther DB PTHR10209 PTHR10209:SF163
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT4G25310 : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
RAP-DB (Rice) LOC_Os08g32170.1 : oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a031038
Brachypodium KQJ98283 , KQJ98279
Barley HORVU0Hr1G017000.6 , HORVU0Hr1G017000.7 , HORVU0Hr1G017000.4 , HORVU0Hr1G017000.5 , HORVU0Hr1G017000.2 , HORVU0Hr1G017000.3 , HORVU0Hr1G017000.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G023300 stripe rust resistance protein Yr10, putative, expressed -
2 Sobic.007G127500 - -
3 Sobic.010G089600 Up-regulation in phyB-1 mutant(PubMedID : 26893475)@trehalose phosphatase, putative, expressed K01087: trehalose 6-phosphate phosphatase
4 Sobic.004G184101 - -
5 Sobic.001G213666 - -
6 Sobic.002G381400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@uncharacterized glycosyl hydrolase Rv2006/MT2062, putative, expressed K01087: trehalose 6-phosphate phosphatase
7 Sobic.004G035400 PFT1, putative, expressed K04733: interleukin-1 receptor-associated kinase 4
8 Sobic.010G189432 - -
9 Sobic.006G256000 - -
10 Sobic.003G187700 polygalacturonase, putative, expressed -
11 Sobic.004G253200 amino acid transporter, putative, expressed K14207: SLC38A2, solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2
12 Sobic.010G250300 ANTH/ENTH domain containing protein, putative, expressed -
13 Sobic.001G140000 early-responsive to dehydration protein-related, putative, expressed -
14 Sobic.002G096300 kinase, pfkB family, putative, expressed -
15 Sobic.001G342101 - -
16 Sobic.010G242700 expressed protein -
17 Sobic.008G055600 OsFBX430 - F-box domain containing protein, expressed -
18 Sobic.002G186200 ASC1, putative, expressed K04710: CERS1_2_3_4, ceramide synthetase
19 Sobic.001G419000 DnaK family protein, putative, expressed K03283: heat shock 70kDa protein 1/2/6/8
20 Sobic.004G120500 aldose 1-epimerase, putative, expressed K01785: galM, aldose 1-epimerase


Gene co-expression network
sample Sobic007G127550 Sobic007G127550 Sobic008G023300 Sobic008G023300 Sobic007G127550--Sobic008G023300 Sobic007G127500 Sobic007G127500 Sobic007G127550--Sobic007G127500 Sobic010G089600 Sobic010G089600 Sobic007G127550--Sobic010G089600 Sobic004G184101 Sobic004G184101 Sobic007G127550--Sobic004G184101 Sobic001G213666 Sobic001G213666 Sobic007G127550--Sobic001G213666 Sobic002G381400 Sobic002G381400 Sobic007G127550--Sobic002G381400 Sobic004G035400 Sobic004G035400 Sobic007G127550--Sobic004G035400 Sobic010G189432 Sobic010G189432 Sobic007G127550--Sobic010G189432 Sobic006G256000 Sobic006G256000 Sobic007G127550--Sobic006G256000 Sobic008G023300--Sobic007G127500 Sobic008G023300--Sobic007G127550 Sobic008G023300--Sobic010G089600 Sobic008G023300--Sobic004G184101 Sobic008G023300--Sobic002G381400 Sobic008G023300--Sobic001G213666 Sobic008G023300--Sobic004G035400 Sobic010G250300 Sobic010G250300 Sobic008G023300--Sobic010G250300 Sobic003G187700 Sobic003G187700 Sobic008G023300--Sobic003G187700 Sobic007G127500--Sobic008G023300 Sobic007G127500--Sobic010G089600 Sobic007G127500--Sobic007G127550 Sobic007G127500--Sobic010G250300 Sobic007G127500--Sobic003G187700 Sobic007G127500--Sobic001G213666 Sobic007G127500--Sobic006G256000 Sobic001G342101 Sobic001G342101 Sobic007G127500--Sobic001G342101 Sobic007G127500--Sobic010G189432 Sobic010G089600--Sobic008G023300 Sobic010G089600--Sobic004G035400 Sobic010G089600--Sobic007G127500 Sobic010G089600--Sobic003G187700 Sobic010G089600--Sobic010G189432 Sobic010G089600--Sobic001G213666 Sobic004G253200 Sobic004G253200 Sobic010G089600--Sobic004G253200 Sobic010G089600--Sobic007G127550 Sobic010G089600--Sobic004G184101 Sobic004G184101--Sobic007G127550 Sobic004G184101--Sobic008G023300 Sobic004G184101--Sobic010G089600 Sobic004G184101--Sobic003G187700 Sobic004G184101--Sobic010G189432 Sobic004G184101--Sobic002G381400 Sobic002G096300 Sobic002G096300 Sobic004G184101--Sobic002G096300 Sobic004G184101--Sobic001G213666 Sobic004G184101--Sobic007G127500 Sobic001G213666--Sobic003G187700 Sobic001G213666--Sobic004G253200 Sobic001G213666--Sobic010G189432 Sobic008G055600 Sobic008G055600 Sobic001G213666--Sobic008G055600 Sobic001G213666--Sobic001G342101 Sobic001G213666--Sobic006G256000 Sobic004G120500 Sobic004G120500 Sobic001G213666--Sobic004G120500 Sobic009G119600 Sobic009G119600 Sobic001G213666--Sobic009G119600 Sobic001G400000 Sobic001G400000 Sobic001G213666--Sobic001G400000 Sobic002G381400--Sobic008G023300 Sobic002G381400--Sobic004G035400 Sobic002G381400--Sobic010G089600 Sobic002G381400--Sobic004G184101 Sobic002G381400--Sobic007G127550 Sobic001G140000 Sobic001G140000 Sobic002G381400--Sobic001G140000 Sobic002G381400--Sobic010G189432 Sobic002G381400--Sobic001G213666 Sobic004G261800 Sobic004G261800 Sobic002G381400--Sobic004G261800 Sobic004G035400--Sobic010G089600 Sobic004G035400--Sobic002G381400 Sobic004G241300 Sobic004G241300 Sobic004G035400--Sobic004G241300 Sobic004G035400--Sobic008G023300 Sobic002G201700 Sobic002G201700 Sobic004G035400--Sobic002G201700 Sobic010G253200 Sobic010G253200 Sobic004G035400--Sobic010G253200 Sobic004G035400--Sobic004G261800 Sobic002G186200 Sobic002G186200 Sobic004G035400--Sobic002G186200 Sobic004G035400--Sobic001G213666 Sobic010G189432--Sobic004G253200 Sobic010G189432--Sobic008G055600 Sobic010G189432--Sobic003G187700 Sobic010G189432--Sobic009G119600 Sobic010G189432--Sobic001G213666 Sobic010G189432--Sobic001G342101 Sobic010G189432--Sobic004G120500 Sobic010G189432--Sobic001G400000 Sobic009G087100 Sobic009G087100 Sobic010G189432--Sobic009G087100 Sobic006G256000--Sobic001G213666 Sobic006G256000--Sobic001G342101 Sobic006G256000--Sobic010G189432 Sobic006G256000--Sobic003G187700 Sobic006G256000--Sobic008G055600 Sobic006G256000--Sobic004G253200 Sobic001G350100 Sobic001G350100 Sobic006G256000--Sobic001G350100 Sobic006G256000--Sobic007G127500 Sobic006G256000--Sobic001G400000
Octagon: transcription factors


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