Gene annotation
Transcriptome id Sobic.010G242700.2
Synonym
Functional annotation expressed protein
UniProt A0A1W0VUK0
Pfam PF02845
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os06g49200.1 : expressed protein
MaizeGDB (Corn) Zm00025a041763
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G342101 - -
2 Sobic.008G055600 OsFBX430 - F-box domain containing protein, expressed -
3 Sobic.003G187700 polygalacturonase, putative, expressed -
4 Sobic.001G183633 - -
5 Sobic.008G122800 Recombinant SbCYP728B35 catalyzed the conversion of 5DS (5-deoxystrigol) to sorgomol in vitro.(PubMedID : 34970291)@cytochrome P450, putative, expressed -
6 Sobic.005G144000 glycosyltransferase, putative, expressed -
7 Sobic.004G253200 amino acid transporter, putative, expressed K14207: SLC38A2, solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2
8 Sobic.003G065100 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR1 - Auxin-responsive SAUR gene family member, expressed -
9 Sobic.004G180100 - -
10 Sobic.002G170100 NAD dependent epimerase/dehydratase family protein, putative, expressed K01784: galE, UDP-glucose 4-epimerase
11 Sobic.001G234500 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
12 Sobic.001G279000 OsFBX382 - F-box domain containing protein, expressed -
13 Sobic.001G213666 - -
14 Sobic.001G230801 - -
15 Sobic.003G013900 - -
16 Sobic.003G441000 rhoGAP domain containing protein, expressed -
17 Sobic.004G120500 aldose 1-epimerase, putative, expressed K01785: galM, aldose 1-epimerase
18 Sobic.004G358000 CAMK_CAMK_like.16 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
19 Sobic.001G350100 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@RING-H2 finger protein ATL5H precursor, putative, expressed K10664: E3 ubiquitin-protein ligase ATL6/9/15/31/42/55
20 Sobic.009G119600 powdery mildew resistant protein 5, putative, expressed -


Gene co-expression network
sample Sobic010G242700 Sobic010G242700 Sobic001G342101 Sobic001G342101 Sobic010G242700--Sobic001G342101 Sobic008G055600 Sobic008G055600 Sobic010G242700--Sobic008G055600 Sobic003G187700 Sobic003G187700 Sobic010G242700--Sobic003G187700 Sobic001G183633 Sobic001G183633 Sobic010G242700--Sobic001G183633 Sobic008G122800 Sobic008G122800 Sobic010G242700--Sobic008G122800 Sobic005G144000 Sobic005G144000 Sobic010G242700--Sobic005G144000 Sobic004G253200 Sobic004G253200 Sobic010G242700--Sobic004G253200 Sobic003G065100 Sobic003G065100 Sobic010G242700--Sobic003G065100 Sobic004G180100 Sobic004G180100 Sobic010G242700--Sobic004G180100 Sobic001G342101--Sobic008G055600 Sobic001G342101--Sobic005G144000 Sobic001G342101--Sobic003G187700 Sobic001G342101--Sobic004G253200 Sobic003G441000 Sobic003G441000 Sobic001G342101--Sobic003G441000 Sobic001G279000 Sobic001G279000 Sobic001G342101--Sobic001G279000 Sobic010G189432 Sobic010G189432 Sobic001G342101--Sobic010G189432 Sobic005G050400 Sobic005G050400 Sobic001G342101--Sobic005G050400 Sobic001G400000 Sobic001G400000 Sobic001G342101--Sobic001G400000 Sobic008G055600--Sobic004G253200 Sobic008G055600--Sobic001G279000 Sobic008G055600--Sobic005G144000 Sobic009G119600 Sobic009G119600 Sobic008G055600--Sobic009G119600 Sobic008G055600--Sobic001G342101 Sobic008G055600--Sobic003G187700 Sobic003G244400 Sobic003G244400 Sobic008G055600--Sobic003G244400 Sobic004G358000 Sobic004G358000 Sobic008G055600--Sobic004G358000 Sobic008G055600--Sobic003G441000 Sobic003G187700--Sobic004G253200 Sobic003G187700--Sobic008G055600 Sobic003G187700--Sobic010G189432 Sobic003G187700--Sobic001G342101 Sobic003G187700--Sobic009G119600 Sobic001G213666 Sobic001G213666 Sobic003G187700--Sobic001G213666 Sobic003G187700--Sobic005G144000 Sobic004G120500 Sobic004G120500 Sobic003G187700--Sobic004G120500 Sobic003G187700--Sobic001G279000 Sobic001G234500 Sobic001G234500 Sobic001G183633--Sobic001G234500 Sobic009G086600 Sobic009G086600 Sobic001G183633--Sobic009G086600 Sobic002G150932 Sobic002G150932 Sobic001G183633--Sobic002G150932 Sobic010G145000 Sobic010G145000 Sobic001G183633--Sobic010G145000 Sobic003G218100 Sobic003G218100 Sobic001G183633--Sobic003G218100 Sobic005G170400 Sobic005G170400 Sobic001G183633--Sobic005G170400 Sobic010G098932 Sobic010G098932 Sobic001G183633--Sobic010G098932 Sobic004G120600 Sobic004G120600 Sobic001G183633--Sobic004G120600 Sobic003G304600 Sobic003G304600 Sobic001G183633--Sobic003G304600 Sobic008G122800--Sobic004G180100 Sobic008G122800--Sobic005G144000 Sobic002G170100 Sobic002G170100 Sobic008G122800--Sobic002G170100 Sobic008G122800--Sobic001G279000 Sobic008G122800--Sobic001G234500 Sobic008G122800--Sobic001G183633 Sobic003G013900 Sobic003G013900 Sobic008G122800--Sobic003G013900 Sobic008G122800--Sobic003G441000 Sobic008G122800--Sobic009G086600 Sobic005G144000--Sobic003G441000 Sobic005G144000--Sobic002G170100 Sobic005G144000--Sobic008G122800 Sobic005G144000--Sobic001G279000 Sobic009G242200 Sobic009G242200 Sobic005G144000--Sobic009G242200 Sobic001G503600 Sobic001G503600 Sobic005G144000--Sobic001G503600 Sobic005G144000--Sobic004G180100 Sobic008G071300 Sobic008G071300 Sobic005G144000--Sobic008G071300 Sobic002G404600 Sobic002G404600 Sobic005G144000--Sobic002G404600 Sobic004G253200--Sobic008G055600 Sobic004G253200--Sobic003G187700 Sobic004G253200--Sobic009G119600 Sobic004G253200--Sobic010G189432 Sobic004G253200--Sobic004G120500 Sobic004G253200--Sobic001G342101 Sobic004G253200--Sobic005G144000 Sobic004G253200--Sobic001G213666 Sobic004G253200--Sobic001G279000 Sobic003G065100--Sobic001G279000 Sobic002G190750 Sobic002G190750 Sobic003G065100--Sobic002G190750 Sobic001G370400 Sobic001G370400 Sobic003G065100--Sobic001G370400 Sobic003G065100--Sobic003G013900 Sobic003G065100--Sobic008G122800 Sobic003G133600 Sobic003G133600 Sobic003G065100--Sobic003G133600 Sobic007G091400 Sobic007G091400 Sobic003G065100--Sobic007G091400 Sobic003G065100--Sobic001G234500 Sobic006G236400 Sobic006G236400 Sobic003G065100--Sobic006G236400 Sobic004G180100--Sobic001G234500 Sobic004G180100--Sobic009G086600 Sobic004G042501 Sobic004G042501 Sobic004G180100--Sobic004G042501 Sobic004G180100--Sobic010G145000 Sobic004G180100--Sobic005G170400 Sobic004G180100--Sobic001G183633 Sobic004G180100--Sobic008G122800 Sobic008G176500 Sobic008G176500 Sobic004G180100--Sobic008G176500 Sobic010G034400 Sobic010G034400 Sobic004G180100--Sobic010G034400
Octagon: transcription factors


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