Gene annotation
Transcriptome id Sobic.001G213666.1
Synonym -
Functional annotation -
UniProt A0A1Z5S708
Pfam -
Panther DB PTHR12606 PTHR12606:SF14
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os10g24954.1 : ulp1 protease family, C-terminal catalytic domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G187700 polygalacturonase, putative, expressed -
2 Sobic.004G253200 amino acid transporter, putative, expressed K14207: SLC38A2, solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2
3 Sobic.010G189432 - -
4 Sobic.008G055600 OsFBX430 - F-box domain containing protein, expressed -
5 Sobic.001G342101 - -
6 Sobic.006G256000 - -
7 Sobic.004G120500 aldose 1-epimerase, putative, expressed K01785: galM, aldose 1-epimerase
8 Sobic.009G119600 powdery mildew resistant protein 5, putative, expressed -
9 Sobic.001G400000 NAD dependent epimerase/dehydratase family protein, putative, expressed K12448: UXE, UDP-arabinose 4-epimerase
10 Sobic.001G279000 OsFBX382 - F-box domain containing protein, expressed -
11 Sobic.005G144000 glycosyltransferase, putative, expressed -
12 Sobic.010G089600 Up-regulation in phyB-1 mutant(PubMedID : 26893475)@trehalose phosphatase, putative, expressed K01087: trehalose 6-phosphate phosphatase
13 Sobic.004G113600 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
14 Sobic.004G007400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCT/B-box zinc finger protein, putative, expressed -
15 Sobic.009G087100 cyclin-A1, putative, expressed K06627: cyclin-A
16 Sobic.010G242700 expressed protein -
17 Sobic.009G189700 - -
18 Sobic.005G049200 exo70 exocyst complex subunit, putative, expressed -
19 Sobic.003G065100 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR1 - Auxin-responsive SAUR gene family member, expressed -
20 Sobic.003G441000 rhoGAP domain containing protein, expressed -


Gene co-expression network
sample Sobic001G213666 Sobic001G213666 Sobic003G187700 Sobic003G187700 Sobic001G213666--Sobic003G187700 Sobic004G253200 Sobic004G253200 Sobic001G213666--Sobic004G253200 Sobic010G189432 Sobic010G189432 Sobic001G213666--Sobic010G189432 Sobic008G055600 Sobic008G055600 Sobic001G213666--Sobic008G055600 Sobic001G342101 Sobic001G342101 Sobic001G213666--Sobic001G342101 Sobic006G256000 Sobic006G256000 Sobic001G213666--Sobic006G256000 Sobic004G120500 Sobic004G120500 Sobic001G213666--Sobic004G120500 Sobic009G119600 Sobic009G119600 Sobic001G213666--Sobic009G119600 Sobic001G400000 Sobic001G400000 Sobic001G213666--Sobic001G400000 Sobic003G187700--Sobic004G253200 Sobic003G187700--Sobic008G055600 Sobic003G187700--Sobic010G189432 Sobic003G187700--Sobic001G342101 Sobic003G187700--Sobic009G119600 Sobic003G187700--Sobic001G213666 Sobic005G144000 Sobic005G144000 Sobic003G187700--Sobic005G144000 Sobic003G187700--Sobic004G120500 Sobic001G279000 Sobic001G279000 Sobic003G187700--Sobic001G279000 Sobic004G253200--Sobic008G055600 Sobic004G253200--Sobic003G187700 Sobic004G253200--Sobic009G119600 Sobic004G253200--Sobic010G189432 Sobic004G253200--Sobic004G120500 Sobic004G253200--Sobic001G342101 Sobic004G253200--Sobic005G144000 Sobic004G253200--Sobic001G213666 Sobic004G253200--Sobic001G279000 Sobic010G189432--Sobic004G253200 Sobic010G189432--Sobic008G055600 Sobic010G189432--Sobic003G187700 Sobic010G189432--Sobic009G119600 Sobic010G189432--Sobic001G213666 Sobic010G189432--Sobic001G342101 Sobic010G189432--Sobic004G120500 Sobic010G189432--Sobic001G400000 Sobic009G087100 Sobic009G087100 Sobic010G189432--Sobic009G087100 Sobic008G055600--Sobic004G253200 Sobic008G055600--Sobic001G279000 Sobic008G055600--Sobic005G144000 Sobic008G055600--Sobic009G119600 Sobic008G055600--Sobic001G342101 Sobic008G055600--Sobic003G187700 Sobic003G244400 Sobic003G244400 Sobic008G055600--Sobic003G244400 Sobic004G358000 Sobic004G358000 Sobic008G055600--Sobic004G358000 Sobic003G441000 Sobic003G441000 Sobic008G055600--Sobic003G441000 Sobic001G342101--Sobic008G055600 Sobic001G342101--Sobic005G144000 Sobic001G342101--Sobic003G187700 Sobic001G342101--Sobic004G253200 Sobic001G342101--Sobic003G441000 Sobic001G342101--Sobic001G279000 Sobic001G342101--Sobic010G189432 Sobic005G050400 Sobic005G050400 Sobic001G342101--Sobic005G050400 Sobic001G342101--Sobic001G400000 Sobic006G256000--Sobic001G213666 Sobic006G256000--Sobic001G342101 Sobic006G256000--Sobic010G189432 Sobic006G256000--Sobic003G187700 Sobic006G256000--Sobic008G055600 Sobic006G256000--Sobic004G253200 Sobic001G350100 Sobic001G350100 Sobic006G256000--Sobic001G350100 Sobic007G127500 Sobic007G127500 Sobic006G256000--Sobic007G127500 Sobic006G256000--Sobic001G400000 Sobic004G120500--Sobic004G253200 Sobic009G189700 Sobic009G189700 Sobic004G120500--Sobic009G189700 Sobic004G120500--Sobic008G055600 Sobic004G120500--Sobic005G144000 Sobic004G120500--Sobic001G350100 Sobic004G120500--Sobic003G187700 Sobic002G170100 Sobic002G170100 Sobic004G120500--Sobic002G170100 Sobic001G503600 Sobic001G503600 Sobic004G120500--Sobic001G503600 Sobic004G120500--Sobic009G119600 Sobic009G119600--Sobic004G253200 Sobic009G119600--Sobic008G055600 Sobic009G119600--Sobic010G189432 Sobic009G119600--Sobic003G187700 Sobic003G013900 Sobic003G013900 Sobic009G119600--Sobic003G013900 Sobic009G119600--Sobic001G279000 Sobic009G119600--Sobic005G144000 Sobic009G119600--Sobic002G170100 Sobic009G119600--Sobic003G244400 Sobic004G113600 Sobic004G113600 Sobic001G400000--Sobic004G113600 Sobic001G112600 Sobic001G112600 Sobic001G400000--Sobic001G112600 Sobic001G384200 Sobic001G384200 Sobic001G400000--Sobic001G384200 Sobic001G400000--Sobic005G050400 Sobic001G400000--Sobic003G244400 Sobic006G265800 Sobic006G265800 Sobic001G400000--Sobic006G265800 Sobic004G007400 Sobic004G007400 Sobic001G400000--Sobic004G007400 Sobic001G400000--Sobic008G055600 Sobic008G156600 Sobic008G156600 Sobic001G400000--Sobic008G156600
Octagon: transcription factors


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