Gene annotation
Transcriptome id Sobic.002G381400.1
Synonym Sb02g039790
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
uncharacterized glycosyl hydrolase Rv2006/MT2062, putative, expressed
UniProt C5X2J1 , Q1W5S4
Pfam PF02358
Panther DB PTHR10788 PTHR10788:SF37
NCBI CDD -
KEGG Orthology K01087; trehalose 6-phosphate phosphatase
Gene Ontology GO:0005992; trehalose biosynthetic process GO:0003824catalytic activity


Orthologs (automatic annotation)
TAIR AT5G10100 : Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
RAP-DB (Rice) LOC_Os07g43160.1 : uncharacterized glycosyl hydrolase Rv2006/MT2062, putative, expressed
MaizeGDB (Corn) Zm00025a006067 , Zm00025a015246 , Zm00025a049495 , Zm00025a033170 , Zm00025a048809 , Zm00025a048808
Brachypodium KQK18917 , KQJ90023 , KQK21468
Barley HORVU2Hr1G029290.16 , HORVU2Hr1G029290.17 , HORVU2Hr1G029290.14 , HORVU2Hr1G029290.15 , HORVU2Hr1G029290.12 , HORVU2Hr1G029290.13 , HORVU2Hr1G029290.10 , HORVU2Hr1G029290.11 , HORVU2Hr1G029290.18 , HORVU2Hr1G029290.19 , HORVU6Hr1G074960.8 , HORVU6Hr1G074960.9 , HORVU6Hr1G074960.4 , HORVU6Hr1G074960.5 , HORVU6Hr1G074960.6 , HORVU6Hr1G074960.7 , HORVU6Hr1G074960.2 , HORVU6Hr1G074960.3 , HORVU7Hr1G037140.4 , HORVU7Hr1G037140.5 , HORVU7Hr1G037140.2 , HORVU7Hr1G037140.3 , HORVU7Hr1G037140.1 , HORVU6Hr1G074960.20 , HORVU2Hr1G029290.4 , HORVU2Hr1G029290.5 , HORVU2Hr1G029290.6 , HORVU2Hr1G029290.7 , HORVU2Hr1G029290.1 , HORVU2Hr1G029290.2 , HORVU2Hr1G029290.3 , HORVU2Hr1G029290.8 , HORVU2Hr1G029290.9 , HORVU2Hr1G029290.20 , HORVU6Hr1G074960.18 , HORVU6Hr1G074960.19 , HORVU6Hr1G074960.16 , HORVU6Hr1G074960.17 , HORVU6Hr1G074960.14 , HORVU6Hr1G074960.12 , HORVU6Hr1G074960.13 , HORVU6Hr1G074960.10 , HORVU6Hr1G074960.11
Wheat TraesCS2A02G161100 , TraesCS5B02G193100 , TraesCS2D02G168300 , TraesCS2D02G168300 , TraesCS5B02G193100 , TraesCS2B02G187000 , TraesCS2D02G168200 , TraesCS2B02G187200 , TraesCS2D02G168100 , TraesCS5B02G193100 , TraesCS2B02G187100 , TraesCS6B02G330900 , TraesCS6B02G330900 , TraesCS6B02G330900 , TraesCS7D02G182600 , TraesCS6A02G301800 , TraesCS6D02G281100 , TraesCS2A02G161200 , TraesCS2A02G161000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G023300 stripe rust resistance protein Yr10, putative, expressed -
2 Sobic.004G035400 PFT1, putative, expressed K04733: interleukin-1 receptor-associated kinase 4
3 Sobic.010G089600 Up-regulation in phyB-1 mutant(PubMedID : 26893475)@trehalose phosphatase, putative, expressed K01087: trehalose 6-phosphate phosphatase
4 Sobic.004G184101 - -
5 Sobic.007G127550 - -
6 Sobic.001G140000 early-responsive to dehydration protein-related, putative, expressed -
7 Sobic.010G189432 - -
8 Sobic.001G213666 - -
9 Sobic.004G261800 sugar-responsive gene(PubMedID : 25496467)@pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha, putative, expressed K00895: pfp, diphosphate-dependent phosphofructokinase
10 Sobic.002G186200 ASC1, putative, expressed K04710: CERS1_2_3_4, ceramide synthetase
11 Sobic.007G127500 - -
12 Sobic.004G253200 amino acid transporter, putative, expressed K14207: SLC38A2, solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2
13 Sobic.001G419000 DnaK family protein, putative, expressed K03283: heat shock 70kDa protein 1/2/6/8
14 Sobic.003G187700 polygalacturonase, putative, expressed -
15 Sobic.002G096300 kinase, pfkB family, putative, expressed -
16 Sobic.006G256000 - -
17 Sobic.001G543400 phosphoglycerate mutase, putative, expressed -
18 Sobic.002G420100 glycosyl transferase, family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
19 Sobic.002G281600 protein of unknown function domain containing protein, expressed -
20 Sobic.002G153000 oxidoreductase domain protein, putative, expressed -


Gene co-expression network
sample Sobic002G381400 Sobic002G381400 Sobic008G023300 Sobic008G023300 Sobic002G381400--Sobic008G023300 Sobic004G035400 Sobic004G035400 Sobic002G381400--Sobic004G035400 Sobic010G089600 Sobic010G089600 Sobic002G381400--Sobic010G089600 Sobic004G184101 Sobic004G184101 Sobic002G381400--Sobic004G184101 Sobic007G127550 Sobic007G127550 Sobic002G381400--Sobic007G127550 Sobic001G140000 Sobic001G140000 Sobic002G381400--Sobic001G140000 Sobic010G189432 Sobic010G189432 Sobic002G381400--Sobic010G189432 Sobic001G213666 Sobic001G213666 Sobic002G381400--Sobic001G213666 Sobic004G261800 Sobic004G261800 Sobic002G381400--Sobic004G261800 Sobic007G127500 Sobic007G127500 Sobic008G023300--Sobic007G127500 Sobic008G023300--Sobic007G127550 Sobic008G023300--Sobic010G089600 Sobic008G023300--Sobic004G184101 Sobic008G023300--Sobic002G381400 Sobic008G023300--Sobic001G213666 Sobic008G023300--Sobic004G035400 Sobic010G250300 Sobic010G250300 Sobic008G023300--Sobic010G250300 Sobic003G187700 Sobic003G187700 Sobic008G023300--Sobic003G187700 Sobic004G035400--Sobic010G089600 Sobic004G035400--Sobic002G381400 Sobic004G241300 Sobic004G241300 Sobic004G035400--Sobic004G241300 Sobic004G035400--Sobic008G023300 Sobic002G201700 Sobic002G201700 Sobic004G035400--Sobic002G201700 Sobic010G253200 Sobic010G253200 Sobic004G035400--Sobic010G253200 Sobic004G035400--Sobic004G261800 Sobic002G186200 Sobic002G186200 Sobic004G035400--Sobic002G186200 Sobic004G035400--Sobic001G213666 Sobic010G089600--Sobic008G023300 Sobic010G089600--Sobic004G035400 Sobic010G089600--Sobic007G127500 Sobic010G089600--Sobic003G187700 Sobic010G089600--Sobic010G189432 Sobic010G089600--Sobic001G213666 Sobic004G253200 Sobic004G253200 Sobic010G089600--Sobic004G253200 Sobic010G089600--Sobic007G127550 Sobic010G089600--Sobic004G184101 Sobic004G184101--Sobic007G127550 Sobic004G184101--Sobic008G023300 Sobic004G184101--Sobic010G089600 Sobic004G184101--Sobic003G187700 Sobic004G184101--Sobic010G189432 Sobic004G184101--Sobic002G381400 Sobic002G096300 Sobic002G096300 Sobic004G184101--Sobic002G096300 Sobic004G184101--Sobic001G213666 Sobic004G184101--Sobic007G127500 Sobic007G127550--Sobic008G023300 Sobic007G127550--Sobic007G127500 Sobic007G127550--Sobic010G089600 Sobic007G127550--Sobic004G184101 Sobic007G127550--Sobic001G213666 Sobic007G127550--Sobic002G381400 Sobic007G127550--Sobic004G035400 Sobic007G127550--Sobic010G189432 Sobic006G256000 Sobic006G256000 Sobic007G127550--Sobic006G256000 Sobic001G140000--Sobic002G381400 Sobic001G140000--Sobic010G089600 Sobic001G140000--Sobic004G184101 Sobic001G140000--Sobic004G035400 Sobic001G419000 Sobic001G419000 Sobic001G140000--Sobic001G419000 Sobic001G140000--Sobic008G023300 Sobic001G140000--Sobic007G127550 Sobic001G140000--Sobic002G096300 Sobic010G193600 Sobic010G193600 Sobic001G140000--Sobic010G193600 Sobic010G189432--Sobic004G253200 Sobic008G055600 Sobic008G055600 Sobic010G189432--Sobic008G055600 Sobic010G189432--Sobic003G187700 Sobic009G119600 Sobic009G119600 Sobic010G189432--Sobic009G119600 Sobic010G189432--Sobic001G213666 Sobic001G342101 Sobic001G342101 Sobic010G189432--Sobic001G342101 Sobic004G120500 Sobic004G120500 Sobic010G189432--Sobic004G120500 Sobic001G400000 Sobic001G400000 Sobic010G189432--Sobic001G400000 Sobic009G087100 Sobic009G087100 Sobic010G189432--Sobic009G087100 Sobic001G213666--Sobic003G187700 Sobic001G213666--Sobic004G253200 Sobic001G213666--Sobic010G189432 Sobic001G213666--Sobic008G055600 Sobic001G213666--Sobic001G342101 Sobic001G213666--Sobic006G256000 Sobic001G213666--Sobic004G120500 Sobic001G213666--Sobic009G119600 Sobic001G213666--Sobic001G400000 Sobic003G013700 Sobic003G013700 Sobic004G261800--Sobic003G013700 Sobic004G261800--Sobic002G186200 Sobic007G014700 Sobic007G014700 Sobic004G261800--Sobic007G014700 Sobic004G261800--Sobic010G253200 Sobic002G420100 Sobic002G420100 Sobic004G261800--Sobic002G420100 Sobic004G261800--Sobic002G201700 Sobic001G303900 Sobic001G303900 Sobic004G261800--Sobic001G303900 Sobic003G423700 Sobic003G423700 Sobic004G261800--Sobic003G423700 Sobic008G156600 Sobic008G156600 Sobic004G261800--Sobic008G156600
Octagon: transcription factors


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