Gene annotation
Transcriptome id Sobic.001G140000.1
Synonym RXW8, Sb01g012190
Functional annotation early-responsive to dehydration protein-related, putative, expressed
UniProt A0A1B6QIW6
Pfam PF13967 PF02714
Panther DB PTHR13018 PTHR13018:SF44
NCBI CDD KOG1134; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology GO:0016020; membrane


Orthologs (automatic annotation)
TAIR AT1G58520 : lipases;hydrolases, acting on ester bonds
RAP-DB (Rice) LOC_Os12g43720.1 : early-responsive to dehydration protein-related, putative, expressed
MaizeGDB (Corn) Zm00025a007490 , Zm00025a025088
Brachypodium PNT74328 , PNT74329 , PNT74327 , KQJ85654 , KQK13814 , KQK13815 , KQK13812 , KQK13813 , KQK13811
Barley HORVU4Hr1G003420.5 , HORVU4Hr1G003420.4 , HORVU4Hr1G003420.7 , HORVU4Hr1G003420.6 , HORVU4Hr1G003420.1 , HORVU4Hr1G003420.3 , HORVU4Hr1G003420.2 , HORVU4Hr1G003420.9 , HORVU4Hr1G003420.8 , HORVU4Hr1G003420.11 , HORVU5Hr1G001660.1 , HORVU5Hr1G001660.2 , HORVU5Hr1G001660.4 , HORVU5Hr1G001660.5 , HORVU5Hr1G001660.3 , HORVU4Hr1G003420.33 , HORVU4Hr1G003420.32 , HORVU4Hr1G003420.31 , HORVU4Hr1G003420.30 , HORVU4Hr1G003420.28 , HORVU4Hr1G003420.29 , HORVU4Hr1G003420.24 , HORVU4Hr1G003420.25 , HORVU4Hr1G003420.26 , HORVU4Hr1G003420.27 , HORVU4Hr1G003420.20 , HORVU4Hr1G003420.21 , HORVU4Hr1G003420.22 , HORVU4Hr1G003420.23 , HORVU5Hr1G001670.2 , HORVU5Hr1G001670.1 , HORVU4Hr1G003420.10 , HORVU4Hr1G003420.13 , HORVU4Hr1G003420.12 , HORVU4Hr1G003420.15 , HORVU4Hr1G003420.14 , HORVU4Hr1G003420.17 , HORVU4Hr1G003420.16 , HORVU4Hr1G003420.19 , HORVU4Hr1G003420.18
Wheat TraesCS4B02G023400 , TraesCS5B02G010700 , TraesCS5B02G010700 , TraesCS5B02G010800 , TraesCS5B02G010800 , TraesCS4D02G020100 , TraesCS4D02G020100 , TraesCS4D02G020100 , TraesCS4D02G020100 , TraesCS4D02G020100 , TraesCS5D02G018100 , TraesCS5D02G018100 , TraesCS5D02G018100 , TraesCS5D02G018100 , TraesCS5D02G018100 , TraesCS5D02G018100 , TraesCS5D02G018100 , TraesCS4A02G291700 , TraesCS4A02G291700 , TraesCS4A02G291700 , TraesCS4A02G291700 , TraesCS5A02G012600 , TraesCS5A02G012600 , TraesCS4B02G022300 , TraesCS4B02G022300 , TraesCS5A02G012500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G381400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@uncharacterized glycosyl hydrolase Rv2006/MT2062, putative, expressed K01087: trehalose 6-phosphate phosphatase
2 Sobic.010G089600 Up-regulation in phyB-1 mutant(PubMedID : 26893475)@trehalose phosphatase, putative, expressed K01087: trehalose 6-phosphate phosphatase
3 Sobic.004G184101 - -
4 Sobic.004G035400 PFT1, putative, expressed K04733: interleukin-1 receptor-associated kinase 4
5 Sobic.001G419000 DnaK family protein, putative, expressed K03283: heat shock 70kDa protein 1/2/6/8
6 Sobic.008G023300 stripe rust resistance protein Yr10, putative, expressed -
7 Sobic.007G127550 - -
8 Sobic.002G096300 kinase, pfkB family, putative, expressed -
9 Sobic.010G193600 phosphoribosyl transferase, putative, expressed K00948: PRPS, ribose-phosphate pyrophosphokinase
10 Sobic.002G070300 expressed protein -
11 Sobic.006G259401 - K06130: lysophospholipase II
12 Sobic.001G162400 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
13 Sobic.001G529200 no apical meristem protein, putative, expressed -
14 Sobic.002G281600 protein of unknown function domain containing protein, expressed -
15 Sobic.001G213666 - -
16 Sobic.001G543400 phosphoglycerate mutase, putative, expressed -
17 Sobic.003G159700 ATKINESIN-13A/KINESIN-13A, putative, expressed K10393: KIF2_24, kinesin family member 2/24
18 Sobic.006G256000 - -
19 Sobic.001G011000 elongation factor Tu, putative, expressed K02358: tuf, elongation factor Tu
20 Sobic.007G127500 - -


Gene co-expression network
sample Sobic001G140000 Sobic001G140000 Sobic002G381400 Sobic002G381400 Sobic001G140000--Sobic002G381400 Sobic010G089600 Sobic010G089600 Sobic001G140000--Sobic010G089600 Sobic004G184101 Sobic004G184101 Sobic001G140000--Sobic004G184101 Sobic004G035400 Sobic004G035400 Sobic001G140000--Sobic004G035400 Sobic001G419000 Sobic001G419000 Sobic001G140000--Sobic001G419000 Sobic008G023300 Sobic008G023300 Sobic001G140000--Sobic008G023300 Sobic007G127550 Sobic007G127550 Sobic001G140000--Sobic007G127550 Sobic002G096300 Sobic002G096300 Sobic001G140000--Sobic002G096300 Sobic010G193600 Sobic010G193600 Sobic001G140000--Sobic010G193600 Sobic002G381400--Sobic008G023300 Sobic002G381400--Sobic004G035400 Sobic002G381400--Sobic010G089600 Sobic002G381400--Sobic004G184101 Sobic002G381400--Sobic007G127550 Sobic002G381400--Sobic001G140000 Sobic010G189432 Sobic010G189432 Sobic002G381400--Sobic010G189432 Sobic001G213666 Sobic001G213666 Sobic002G381400--Sobic001G213666 Sobic004G261800 Sobic004G261800 Sobic002G381400--Sobic004G261800 Sobic010G089600--Sobic008G023300 Sobic010G089600--Sobic004G035400 Sobic007G127500 Sobic007G127500 Sobic010G089600--Sobic007G127500 Sobic003G187700 Sobic003G187700 Sobic010G089600--Sobic003G187700 Sobic010G089600--Sobic010G189432 Sobic010G089600--Sobic001G213666 Sobic004G253200 Sobic004G253200 Sobic010G089600--Sobic004G253200 Sobic010G089600--Sobic007G127550 Sobic010G089600--Sobic004G184101 Sobic004G184101--Sobic007G127550 Sobic004G184101--Sobic008G023300 Sobic004G184101--Sobic010G089600 Sobic004G184101--Sobic003G187700 Sobic004G184101--Sobic010G189432 Sobic004G184101--Sobic002G381400 Sobic004G184101--Sobic002G096300 Sobic004G184101--Sobic001G213666 Sobic004G184101--Sobic007G127500 Sobic004G035400--Sobic010G089600 Sobic004G035400--Sobic002G381400 Sobic004G241300 Sobic004G241300 Sobic004G035400--Sobic004G241300 Sobic004G035400--Sobic008G023300 Sobic002G201700 Sobic002G201700 Sobic004G035400--Sobic002G201700 Sobic010G253200 Sobic010G253200 Sobic004G035400--Sobic010G253200 Sobic004G035400--Sobic004G261800 Sobic002G186200 Sobic002G186200 Sobic004G035400--Sobic002G186200 Sobic004G035400--Sobic001G213666 Sobic001G419000--Sobic001G140000 Sobic001G419000--Sobic002G381400 Sobic001G419000--Sobic008G023300 Sobic001G419000--Sobic010G089600 Sobic002G274600 Sobic002G274600 Sobic001G419000--Sobic002G274600 Sobic001G419000--Sobic004G184101 Sobic002G197000 Sobic002G197000 Sobic001G419000--Sobic002G197000 Sobic009G084400 Sobic009G084400 Sobic001G419000--Sobic009G084400 Sobic001G419000--Sobic007G127550 Sobic008G023300--Sobic007G127500 Sobic008G023300--Sobic007G127550 Sobic008G023300--Sobic010G089600 Sobic008G023300--Sobic004G184101 Sobic008G023300--Sobic002G381400 Sobic008G023300--Sobic001G213666 Sobic008G023300--Sobic004G035400 Sobic010G250300 Sobic010G250300 Sobic008G023300--Sobic010G250300 Sobic008G023300--Sobic003G187700 Sobic007G127550--Sobic008G023300 Sobic007G127550--Sobic007G127500 Sobic007G127550--Sobic010G089600 Sobic007G127550--Sobic004G184101 Sobic007G127550--Sobic001G213666 Sobic007G127550--Sobic002G381400 Sobic007G127550--Sobic004G035400 Sobic007G127550--Sobic010G189432 Sobic006G256000 Sobic006G256000 Sobic007G127550--Sobic006G256000 Sobic002G096300--Sobic010G189432 Sobic002G096300--Sobic010G089600 Sobic009G119600 Sobic009G119600 Sobic002G096300--Sobic009G119600 Sobic002G096300--Sobic004G253200 Sobic002G096300--Sobic003G187700 Sobic001G342101 Sobic001G342101 Sobic002G096300--Sobic001G342101 Sobic008G055600 Sobic008G055600 Sobic002G096300--Sobic008G055600 Sobic002G096300--Sobic004G184101 Sobic002G096300--Sobic001G213666 Sobic006G232800 Sobic006G232800 Sobic010G193600--Sobic006G232800 Sobic007G172700 Sobic007G172700 Sobic010G193600--Sobic007G172700 Sobic001G356200 Sobic001G356200 Sobic010G193600--Sobic001G356200 Sobic003G348100 Sobic003G348100 Sobic010G193600--Sobic003G348100 Sobic001G378800 Sobic001G378800 Sobic010G193600--Sobic001G378800 Sobic008G152700 Sobic008G152700 Sobic010G193600--Sobic008G152700 Sobic008G171400 Sobic008G171400 Sobic010G193600--Sobic008G171400 Sobic004G350700 Sobic004G350700 Sobic010G193600--Sobic004G350700 Sobic008G072500 Sobic008G072500 Sobic010G193600--Sobic008G072500
Octagon: transcription factors


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