Gene annotation
Transcriptome id Sobic.006G259401.1
Synonym -
Functional annotation -
UniProt A0A1Z5RGA0
Pfam PF12695
Panther DB PTHR10655 PTHR10655:SF30
NCBI CDD KOG2112; Lysophospholipase
KEGG Orthology K06130; lysophospholipase II
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G22300 : carboxylesterases
RAP-DB (Rice) LOC_Os04g57370.1 : acyl-protein thioesterase, putative, expressed
MaizeGDB (Corn) Zm00025a009376 , Zm00025a009377 , Zm00025a032225
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G045600 aminotransferase, classes I and II, domain containing protein, expressed -
2 Sobic.008G151500 EXS family protein, putative, expressed -
3 Sobic.003G236800 -(PubMedID : 26976818)@bile acid sodium symporter family protein, putative, expressed K03453: bile acid:Na+ symporter, BASS family
4 Sobic.002G101300 erythronate-4-phosphate dehydrogenase domain containing protein, expressed -
5 Sobic.007G120800 puromycin-sensitive aminopeptidase, putative, expressed K08776: puromycin-sensitive aminopeptidase
6 Sobic.001G140000 early-responsive to dehydration protein-related, putative, expressed -
7 Sobic.002G283100 josephin, putative, expressed -
8 Sobic.001G392200 CAS1 domain-containing protein 1 precursor, putative, expressed -
9 Sobic.007G179900 6-phosphogluconolactonase, putative, expressed K01057: PGLS, pgl, 6-phosphogluconolactonase
10 Sobic.007G065500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phosphate/phosphate translocator, putative, expressed K15283: solute carrier family 35, member E1
11 Sobic.004G000100 uridine/cytidine kinase-like 1, putative, expressed K00876: udk, uridine kinase
12 Sobic.008G084600 adenylate kinase, putative, expressed K00939: adk, adenylate kinase
13 Sobic.002G070300 expressed protein -
14 Sobic.001G458800 mitochondrial-processing peptidase subunit, mitochondrial precursor, putative, expressed K17732: PMPCB, mitochondrial-processing peptidase subunit beta
15 Sobic.001G443200 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3
16 Sobic.001G000400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@pleiotropic drug resistance protein, putative, expressed -
17 Sobic.001G011000 elongation factor Tu, putative, expressed K02358: tuf, elongation factor Tu
18 Sobic.003G034900 mitochondrial-processing peptidase subunit alpha, mitochondrial precursor, putative, expressed K01412: PMPCA, mitochondrial-processing peptidase subunit alpha
19 Sobic.K043400 dnaJ homolog subfamily C member, putative, expressed K09523: DnaJ homolog subfamily C member 3
20 Sobic.002G222200 OsPDIL2-3 protein disulfide isomerase PDIL2-3, expressed K09584: PDIA6, protein disulfide-isomerase A6


Gene co-expression network
sample Sobic006G259401 Sobic006G259401 Sobic003G045600 Sobic003G045600 Sobic006G259401--Sobic003G045600 Sobic008G151500 Sobic008G151500 Sobic006G259401--Sobic008G151500 Sobic003G236800 Sobic003G236800 Sobic006G259401--Sobic003G236800 Sobic002G101300 Sobic002G101300 Sobic006G259401--Sobic002G101300 Sobic007G120800 Sobic007G120800 Sobic006G259401--Sobic007G120800 Sobic001G140000 Sobic001G140000 Sobic006G259401--Sobic001G140000 Sobic002G283100 Sobic002G283100 Sobic006G259401--Sobic002G283100 Sobic001G392200 Sobic001G392200 Sobic006G259401--Sobic001G392200 Sobic007G179900 Sobic007G179900 Sobic006G259401--Sobic007G179900 Sobic003G045600--Sobic006G259401 Sobic003G045600--Sobic003G236800 Sobic003G045600--Sobic002G101300 Sobic004G079700 Sobic004G079700 Sobic003G045600--Sobic004G079700 Sobic002G153100 Sobic002G153100 Sobic003G045600--Sobic002G153100 Sobic003G045600--Sobic001G140000 Sobic007G119800 Sobic007G119800 Sobic003G045600--Sobic007G119800 Sobic002G274600 Sobic002G274600 Sobic003G045600--Sobic002G274600 Sobic003G045600--Sobic008G151500 Sobic001G443200 Sobic001G443200 Sobic008G151500--Sobic001G443200 Sobic001G220900 Sobic001G220900 Sobic008G151500--Sobic001G220900 SobicK043400 SobicK043400 Sobic008G151500--SobicK043400 Sobic008G151500--Sobic006G259401 Sobic004G000100 Sobic004G000100 Sobic008G151500--Sobic004G000100 Sobic001G458800 Sobic001G458800 Sobic008G151500--Sobic001G458800 Sobic003G034900 Sobic003G034900 Sobic008G151500--Sobic003G034900 Sobic002G070300 Sobic002G070300 Sobic008G151500--Sobic002G070300 Sobic002G295700 Sobic002G295700 Sobic008G151500--Sobic002G295700 Sobic003G236800--Sobic006G259401 Sobic003G236800--Sobic003G045600 Sobic002G117600 Sobic002G117600 Sobic003G236800--Sobic002G117600 Sobic002G408800 Sobic002G408800 Sobic003G236800--Sobic002G408800 Sobic003G236800--Sobic007G120800 Sobic003G236800--Sobic007G119800 Sobic003G236800--Sobic008G151500 Sobic003G236800--Sobic007G179900 Sobic001G380600 Sobic001G380600 Sobic003G236800--Sobic001G380600 Sobic010G101600 Sobic010G101600 Sobic002G101300--Sobic010G101600 Sobic010G018500 Sobic010G018500 Sobic002G101300--Sobic010G018500 Sobic002G368600 Sobic002G368600 Sobic002G101300--Sobic002G368600 Sobic003G261100 Sobic003G261100 Sobic002G101300--Sobic003G261100 Sobic002G101300--Sobic003G045600 Sobic002G101300--Sobic006G259401 Sobic002G271300 Sobic002G271300 Sobic002G101300--Sobic002G271300 Sobic004G257000 Sobic004G257000 Sobic002G101300--Sobic004G257000 Sobic002G101300--Sobic001G392200 Sobic007G120800--Sobic002G408800 Sobic002G029300 Sobic002G029300 Sobic007G120800--Sobic002G029300 Sobic002G194800 Sobic002G194800 Sobic007G120800--Sobic002G194800 Sobic006G056200 Sobic006G056200 Sobic007G120800--Sobic006G056200 Sobic008G156300 Sobic008G156300 Sobic007G120800--Sobic008G156300 Sobic007G173700 Sobic007G173700 Sobic007G120800--Sobic007G173700 Sobic001G161700 Sobic001G161700 Sobic007G120800--Sobic001G161700 Sobic007G120800--Sobic006G259401 Sobic007G065500 Sobic007G065500 Sobic007G120800--Sobic007G065500 Sobic002G381400 Sobic002G381400 Sobic001G140000--Sobic002G381400 Sobic010G089600 Sobic010G089600 Sobic001G140000--Sobic010G089600 Sobic004G184101 Sobic004G184101 Sobic001G140000--Sobic004G184101 Sobic004G035400 Sobic004G035400 Sobic001G140000--Sobic004G035400 Sobic001G419000 Sobic001G419000 Sobic001G140000--Sobic001G419000 Sobic008G023300 Sobic008G023300 Sobic001G140000--Sobic008G023300 Sobic007G127550 Sobic007G127550 Sobic001G140000--Sobic007G127550 Sobic002G096300 Sobic002G096300 Sobic001G140000--Sobic002G096300 Sobic010G193600 Sobic010G193600 Sobic001G140000--Sobic010G193600 Sobic002G283100--Sobic006G259401 Sobic010G122100 Sobic010G122100 Sobic002G283100--Sobic010G122100 Sobic002G283100--Sobic003G236800 Sobic001G239900 Sobic001G239900 Sobic002G283100--Sobic001G239900 Sobic002G201700 Sobic002G201700 Sobic002G283100--Sobic002G201700 Sobic002G283100--Sobic008G151500 Sobic009G083800 Sobic009G083800 Sobic002G283100--Sobic009G083800 Sobic001G000400 Sobic001G000400 Sobic002G283100--Sobic001G000400 Sobic004G107000 Sobic004G107000 Sobic002G283100--Sobic004G107000 Sobic001G392200--Sobic002G070300 Sobic009G041800 Sobic009G041800 Sobic001G392200--Sobic009G041800 Sobic002G232400 Sobic002G232400 Sobic001G392200--Sobic002G232400 Sobic001G011000 Sobic001G011000 Sobic001G392200--Sobic001G011000 Sobic002G153000 Sobic002G153000 Sobic001G392200--Sobic002G153000 Sobic001G392200--Sobic010G101600 Sobic001G392200--Sobic002G101300 Sobic004G218600 Sobic004G218600 Sobic001G392200--Sobic004G218600 Sobic002G186900 Sobic002G186900 Sobic001G392200--Sobic002G186900 Sobic007G179900--SobicK043400 Sobic007G179900--Sobic008G151500 Sobic007G179900--Sobic006G259401 Sobic007G179900--Sobic003G236800 Sobic008G102600 Sobic008G102600 Sobic007G179900--Sobic008G102600 Sobic007G179900--Sobic001G443200 Sobic007G179900--Sobic002G295700 Sobic007G179900--Sobic001G458800 Sobic003G196200 Sobic003G196200 Sobic007G179900--Sobic003G196200
Octagon: transcription factors


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