Gene annotation
Transcriptome id Sobic.007G179900.2
Synonym EMB2024, PGL3, Sb07g025080
Functional annotation 6-phosphogluconolactonase, putative, expressed
UniProt A0A1Z5RAF3
Pfam PF01182
Panther DB PTHR11054 PTHR11054:SF3
NCBI CDD KOG3147; 6-phosphogluconolactonase - like protein
KEGG Orthology K01057; PGLS, pgl, 6-phosphogluconolactonase
Gene Ontology GO:0005975; carbohydrate metabolic process


Orthologs (automatic annotation)
TAIR AT5G24400 : NagB/RpiA/CoA transferase-like superfamily protein
RAP-DB (Rice) LOC_Os08g43370.1 : 6-phosphogluconolactonase, putative, expressed
MaizeGDB (Corn) Zm00025a005713
Brachypodium KQJ99267
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.007G179900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.K043400 dnaJ homolog subfamily C member, putative, expressed K09523: DnaJ homolog subfamily C member 3
2 Sobic.008G151500 EXS family protein, putative, expressed -
3 Sobic.006G259401 - K06130: lysophospholipase II
4 Sobic.003G236800 -(PubMedID : 26976818)@bile acid sodium symporter family protein, putative, expressed K03453: bile acid:Na+ symporter, BASS family
5 Sobic.008G102600 expressed protein -
6 Sobic.001G443200 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3
7 Sobic.002G295700 transporter family protein, putative, expressed -
8 Sobic.001G458800 mitochondrial-processing peptidase subunit, mitochondrial precursor, putative, expressed K17732: PMPCB, mitochondrial-processing peptidase subunit beta
9 Sobic.003G196200 elongation factor TS family protein, expressed -
10 Sobic.009G224400 ATP synthase, putative, expressed K02133: ATPeF1B, ATP5B, F-type H+-transporting ATPase subunit beta
11 Sobic.008G018300 expressed protein K17402: small subunit ribosomal protein S23
12 Sobic.003G291900 expressed protein -
13 Sobic.010G258000 peptidyl-prolyl cis-trans isomerase, putative, expressed K01802: peptidylprolyl isomerase
14 Sobic.001G077900 SSA2 - 2S albumin seed storage family protein precursor, putative, expressed -
15 Sobic.009G054600 -(PubMedID : 26976818)@dihydrolipoyl dehydrogenase, mitochondrial precursor, putative, expressed K00382: DLD, lpd, dihydrolipoamide dehydrogenase
16 Sobic.009G112900 expressed protein K18170: LYRM7, complex III assembly factor LYRM7
17 Sobic.001G011000 elongation factor Tu, putative, expressed K02358: tuf, elongation factor Tu
18 Sobic.001G060300 expressed protein -
19 Sobic.002G262200 expressed protein -
20 Sobic.003G205400 ribosomal protein L25, putative, expressed K02897: RP-L25, large subunit ribosomal protein L25


Gene co-expression network
sample Sobic007G179900 Sobic007G179900 SobicK043400 SobicK043400 Sobic007G179900--SobicK043400 Sobic008G151500 Sobic008G151500 Sobic007G179900--Sobic008G151500 Sobic006G259401 Sobic006G259401 Sobic007G179900--Sobic006G259401 Sobic003G236800 Sobic003G236800 Sobic007G179900--Sobic003G236800 Sobic008G102600 Sobic008G102600 Sobic007G179900--Sobic008G102600 Sobic001G443200 Sobic001G443200 Sobic007G179900--Sobic001G443200 Sobic002G295700 Sobic002G295700 Sobic007G179900--Sobic002G295700 Sobic001G458800 Sobic001G458800 Sobic007G179900--Sobic001G458800 Sobic003G196200 Sobic003G196200 Sobic007G179900--Sobic003G196200 Sobic001G378800 Sobic001G378800 SobicK043400--Sobic001G378800 Sobic001G047600 Sobic001G047600 SobicK043400--Sobic001G047600 Sobic009G054600 Sobic009G054600 SobicK043400--Sobic009G054600 SobicK043400--Sobic002G295700 Sobic002G117600 Sobic002G117600 SobicK043400--Sobic002G117600 Sobic006G012700 Sobic006G012700 SobicK043400--Sobic006G012700 Sobic010G065200 Sobic010G065200 SobicK043400--Sobic010G065200 Sobic004G093600 Sobic004G093600 SobicK043400--Sobic004G093600 Sobic004G096700 Sobic004G096700 SobicK043400--Sobic004G096700 Sobic008G151500--Sobic001G443200 Sobic001G220900 Sobic001G220900 Sobic008G151500--Sobic001G220900 Sobic008G151500--SobicK043400 Sobic008G151500--Sobic006G259401 Sobic004G000100 Sobic004G000100 Sobic008G151500--Sobic004G000100 Sobic008G151500--Sobic001G458800 Sobic003G034900 Sobic003G034900 Sobic008G151500--Sobic003G034900 Sobic002G070300 Sobic002G070300 Sobic008G151500--Sobic002G070300 Sobic008G151500--Sobic002G295700 Sobic003G045600 Sobic003G045600 Sobic006G259401--Sobic003G045600 Sobic006G259401--Sobic008G151500 Sobic006G259401--Sobic003G236800 Sobic002G101300 Sobic002G101300 Sobic006G259401--Sobic002G101300 Sobic007G120800 Sobic007G120800 Sobic006G259401--Sobic007G120800 Sobic001G140000 Sobic001G140000 Sobic006G259401--Sobic001G140000 Sobic002G283100 Sobic002G283100 Sobic006G259401--Sobic002G283100 Sobic001G392200 Sobic001G392200 Sobic006G259401--Sobic001G392200 Sobic006G259401--Sobic007G179900 Sobic003G236800--Sobic006G259401 Sobic003G236800--Sobic003G045600 Sobic003G236800--Sobic002G117600 Sobic002G408800 Sobic002G408800 Sobic003G236800--Sobic002G408800 Sobic003G236800--Sobic007G120800 Sobic007G119800 Sobic007G119800 Sobic003G236800--Sobic007G119800 Sobic003G236800--Sobic008G151500 Sobic003G236800--Sobic007G179900 Sobic001G380600 Sobic001G380600 Sobic003G236800--Sobic001G380600 Sobic008G102600--Sobic001G443200 Sobic009G112900 Sobic009G112900 Sobic008G102600--Sobic009G112900 Sobic008G102600--Sobic003G196200 Sobic008G102600--Sobic004G000100 Sobic004G045300 Sobic004G045300 Sobic008G102600--Sobic004G045300 Sobic008G110500 Sobic008G110500 Sobic008G102600--Sobic008G110500 Sobic001G387800 Sobic001G387800 Sobic008G102600--Sobic001G387800 Sobic001G112400 Sobic001G112400 Sobic008G102600--Sobic001G112400 Sobic004G039400 Sobic004G039400 Sobic008G102600--Sobic004G039400 Sobic001G443200--Sobic008G102600 Sobic001G443200--Sobic004G000100 Sobic001G443200--Sobic004G039400 Sobic001G443200--Sobic001G112400 Sobic004G344800 Sobic004G344800 Sobic001G443200--Sobic004G344800 Sobic002G141700 Sobic002G141700 Sobic001G443200--Sobic002G141700 Sobic010G040900 Sobic010G040900 Sobic001G443200--Sobic010G040900 Sobic001G073600 Sobic001G073600 Sobic001G443200--Sobic001G073600 Sobic002G262200 Sobic002G262200 Sobic001G443200--Sobic002G262200 Sobic002G295700--SobicK043400 Sobic002G431000 Sobic002G431000 Sobic002G295700--Sobic002G431000 Sobic002G295700--Sobic004G096700 Sobic010G171000 Sobic010G171000 Sobic002G295700--Sobic010G171000 Sobic002G295700--Sobic008G151500 Sobic009G025200 Sobic009G025200 Sobic002G295700--Sobic009G025200 Sobic001G378200 Sobic001G378200 Sobic002G295700--Sobic001G378200 Sobic002G295700--Sobic004G000100 Sobic002G295700--Sobic001G443200 Sobic001G458800--Sobic003G034900 Sobic009G224400 Sobic009G224400 Sobic001G458800--Sobic009G224400 Sobic006G058900 Sobic006G058900 Sobic001G458800--Sobic006G058900 Sobic001G115700 Sobic001G115700 Sobic001G458800--Sobic001G115700 Sobic007G171500 Sobic007G171500 Sobic001G458800--Sobic007G171500 Sobic001G458800--Sobic001G073600 Sobic002G186300 Sobic002G186300 Sobic001G458800--Sobic002G186300 Sobic002G395000 Sobic002G395000 Sobic001G458800--Sobic002G395000 Sobic001G031900 Sobic001G031900 Sobic001G458800--Sobic001G031900 Sobic003G196200--Sobic001G387800 Sobic003G196200--Sobic008G102600 Sobic001G077900 Sobic001G077900 Sobic003G196200--Sobic001G077900 Sobic003G196200--Sobic004G045300 Sobic001G161700 Sobic001G161700 Sobic003G196200--Sobic001G161700 Sobic001G178500 Sobic001G178500 Sobic003G196200--Sobic001G178500 Sobic003G196200--Sobic008G110500 Sobic003G196200--Sobic004G000100 Sobic001G473800 Sobic001G473800 Sobic003G196200--Sobic001G473800
Octagon: transcription factors


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