Gene annotation
Transcriptome id Sobic.002G295700.2,Sobic.002G295700.1
Synonym Sb02g032700
Functional annotation transporter family protein, putative, expressed
UniProt C5X8D3
Pfam PF00083 PF07690
Panther DB PTHR24064 PTHR24064:SF273
NCBI CDD KOG0253; Synaptic vesicle transporter SV2 (major facilitator superfamily)
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT3G13050 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os09g38690.1 : transporter family protein, putative, expressed
MaizeGDB (Corn) Zm00025a014558
Brachypodium PNT65137 , KQJ91466 , KQJ91467 , KQJ91465 , KQJ91468
Barley HORVU5Hr1G089260.10 , HORVU5Hr1G089260.11 , HORVU5Hr1G089260.4 , HORVU5Hr1G089260.5 , HORVU5Hr1G089260.6 , HORVU5Hr1G089260.7 , HORVU5Hr1G089260.1 , HORVU5Hr1G089260.2 , HORVU5Hr1G089260.3 , HORVU5Hr1G089260.8 , HORVU5Hr1G089260.9
Wheat TraesCS5A02G363300 , TraesCS5A02G363300 , TraesCS5B02G365400 , TraesCS5B02G365400 , TraesCS5D02G372500 , TraesCS5D02G372500
Populus -


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cDNA sequences
Sobic.002G295700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.K043400 dnaJ homolog subfamily C member, putative, expressed K09523: DnaJ homolog subfamily C member 3
2 Sobic.002G431000 transporter, putative, expressed -
3 Sobic.004G096700 xaa-Pro dipeptidase, putative, expressed K14213: Xaa-Pro dipeptidase
4 Sobic.010G171000 phospholipid-transporting ATPase 4, putative, expressed K01530: phospholipid-translocating ATPase
5 Sobic.008G151500 EXS family protein, putative, expressed -
6 Sobic.009G025200 HECT-domain domain containing protein, expressed K10590: E3 ubiquitin-protein ligase TRIP12
7 Sobic.001G378200 tetratricopeptide repeat domain containing protein, expressed -
8 Sobic.004G000100 uridine/cytidine kinase-like 1, putative, expressed K00876: udk, uridine kinase
9 Sobic.001G443200 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3
10 Sobic.006G203300 GPR89A, putative, expressed -
11 Sobic.004G112900 expressed protein -
12 Sobic.001G445500 coatomer subunit gamma-1, putative, expressed K17267: coatomer subunit gamma
13 Sobic.004G236200 SEC6, putative, expressed K06110: EXOC3, exocyst complex component 3
14 Sobic.006G222500 expressed protein -
15 Sobic.010G184300 glycosyltransferase family protein, putative, expressed K00771: protein xylosyltransferase
16 Sobic.001G399700 exonuclease, putative, expressed -
17 Sobic.006G012700 expressed protein -
18 Sobic.002G301100 PQ loop repeat domain containing protein, expressed K09660: mannose-P-dolichol utilization defect 1
19 Sobic.007G173700 WD domain, G-beta repeat domain containing protein, expressed -
20 Sobic.002G265300 acyl-coenzyme A thioesterase 10, mitochondrial precursor, putative, expressed K17361: acyl-coenzyme A thioesterase 9


Gene co-expression network
sample Sobic002G295700 Sobic002G295700 SobicK043400 SobicK043400 Sobic002G295700--SobicK043400 Sobic002G431000 Sobic002G431000 Sobic002G295700--Sobic002G431000 Sobic004G096700 Sobic004G096700 Sobic002G295700--Sobic004G096700 Sobic010G171000 Sobic010G171000 Sobic002G295700--Sobic010G171000 Sobic008G151500 Sobic008G151500 Sobic002G295700--Sobic008G151500 Sobic009G025200 Sobic009G025200 Sobic002G295700--Sobic009G025200 Sobic001G378200 Sobic001G378200 Sobic002G295700--Sobic001G378200 Sobic004G000100 Sobic004G000100 Sobic002G295700--Sobic004G000100 Sobic001G443200 Sobic001G443200 Sobic002G295700--Sobic001G443200 Sobic001G378800 Sobic001G378800 SobicK043400--Sobic001G378800 Sobic001G047600 Sobic001G047600 SobicK043400--Sobic001G047600 Sobic009G054600 Sobic009G054600 SobicK043400--Sobic009G054600 SobicK043400--Sobic002G295700 Sobic002G117600 Sobic002G117600 SobicK043400--Sobic002G117600 Sobic006G012700 Sobic006G012700 SobicK043400--Sobic006G012700 Sobic010G065200 Sobic010G065200 SobicK043400--Sobic010G065200 Sobic004G093600 Sobic004G093600 SobicK043400--Sobic004G093600 SobicK043400--Sobic004G096700 Sobic010G184300 Sobic010G184300 Sobic002G431000--Sobic010G184300 Sobic002G431000--Sobic002G295700 Sobic003G377000 Sobic003G377000 Sobic002G431000--Sobic003G377000 Sobic001G457700 Sobic001G457700 Sobic002G431000--Sobic001G457700 Sobic004G236200 Sobic004G236200 Sobic002G431000--Sobic004G236200 Sobic005G177700 Sobic005G177700 Sobic002G431000--Sobic005G177700 Sobic004G112900 Sobic004G112900 Sobic002G431000--Sobic004G112900 Sobic007G056100 Sobic007G056100 Sobic002G431000--Sobic007G056100 Sobic010G064600 Sobic010G064600 Sobic002G431000--Sobic010G064600 Sobic004G096700--Sobic002G295700 Sobic001G399700 Sobic001G399700 Sobic004G096700--Sobic001G399700 Sobic004G096700--SobicK043400 Sobic002G301100 Sobic002G301100 Sobic004G096700--Sobic002G301100 Sobic004G096700--Sobic009G054600 Sobic010G133400 Sobic010G133400 Sobic004G096700--Sobic010G133400 Sobic001G501900 Sobic001G501900 Sobic004G096700--Sobic001G501900 Sobic004G254800 Sobic004G254800 Sobic004G096700--Sobic004G254800 Sobic004G096700--Sobic010G171000 Sobic001G445500 Sobic001G445500 Sobic010G171000--Sobic001G445500 Sobic010G171000--Sobic010G065200 Sobic008G019532 Sobic008G019532 Sobic010G171000--Sobic008G019532 Sobic001G455000 Sobic001G455000 Sobic010G171000--Sobic001G455000 Sobic001G374000 Sobic001G374000 Sobic010G171000--Sobic001G374000 Sobic010G171000--Sobic002G117600 Sobic010G160300 Sobic010G160300 Sobic010G171000--Sobic010G160300 Sobic001G114200 Sobic001G114200 Sobic010G171000--Sobic001G114200 Sobic003G346400 Sobic003G346400 Sobic010G171000--Sobic003G346400 Sobic008G151500--Sobic001G443200 Sobic001G220900 Sobic001G220900 Sobic008G151500--Sobic001G220900 Sobic008G151500--SobicK043400 Sobic006G259401 Sobic006G259401 Sobic008G151500--Sobic006G259401 Sobic008G151500--Sobic004G000100 Sobic001G458800 Sobic001G458800 Sobic008G151500--Sobic001G458800 Sobic003G034900 Sobic003G034900 Sobic008G151500--Sobic003G034900 Sobic002G070300 Sobic002G070300 Sobic008G151500--Sobic002G070300 Sobic008G151500--Sobic002G295700 Sobic009G025200--Sobic010G171000 Sobic009G025200--Sobic002G295700 Sobic002G007800 Sobic002G007800 Sobic009G025200--Sobic002G007800 Sobic002G304700 Sobic002G304700 Sobic009G025200--Sobic002G304700 Sobic002G265300 Sobic002G265300 Sobic009G025200--Sobic002G265300 Sobic002G095100 Sobic002G095100 Sobic009G025200--Sobic002G095100 Sobic001G449000 Sobic001G449000 Sobic009G025200--Sobic001G449000 Sobic009G025200--Sobic010G160300 Sobic009G025200--Sobic002G431000 Sobic001G465400 Sobic001G465400 Sobic001G378200--Sobic001G465400 Sobic001G112400 Sobic001G112400 Sobic001G378200--Sobic001G112400 Sobic001G378200--Sobic006G012700 Sobic004G078700 Sobic004G078700 Sobic001G378200--Sobic004G078700 Sobic004G039400 Sobic004G039400 Sobic001G378200--Sobic004G039400 Sobic001G378200--Sobic001G443200 Sobic001G008100 Sobic001G008100 Sobic001G378200--Sobic001G008100 Sobic002G262200 Sobic002G262200 Sobic001G378200--Sobic002G262200 Sobic005G207400 Sobic005G207400 Sobic001G378200--Sobic005G207400 Sobic007G173700 Sobic007G173700 Sobic004G000100--Sobic007G173700 Sobic004G000100--Sobic001G443200 Sobic004G000100--Sobic001G465400 Sobic001G161700 Sobic001G161700 Sobic004G000100--Sobic001G161700 Sobic008G102600 Sobic008G102600 Sobic004G000100--Sobic008G102600 Sobic004G347600 Sobic004G347600 Sobic004G000100--Sobic004G347600 Sobic001G077900 Sobic001G077900 Sobic004G000100--Sobic001G077900 Sobic001G023100 Sobic001G023100 Sobic004G000100--Sobic001G023100 Sobic002G029300 Sobic002G029300 Sobic004G000100--Sobic002G029300 Sobic001G443200--Sobic008G102600 Sobic001G443200--Sobic004G000100 Sobic001G443200--Sobic004G039400 Sobic001G443200--Sobic001G112400 Sobic004G344800 Sobic004G344800 Sobic001G443200--Sobic004G344800 Sobic002G141700 Sobic002G141700 Sobic001G443200--Sobic002G141700 Sobic010G040900 Sobic010G040900 Sobic001G443200--Sobic010G040900 Sobic001G073600 Sobic001G073600 Sobic001G443200--Sobic001G073600 Sobic001G443200--Sobic002G262200
Octagon: transcription factors


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