Gene annotation
Transcriptome id Sobic.010G184300.1
Synonym Sb10g023480
Functional annotation glycosyltransferase family protein, putative, expressed
UniProt C5Z5M0
Pfam PF02485
Panther DB PTHR19297 PTHR19297:SF98
NCBI CDD KOG0799; Branching enzyme
KEGG Orthology K00771; protein xylosyltransferase
Gene Ontology GO:0016020; membrane GO:0008375acetylglucosaminyltransferase activity


Orthologs (automatic annotation)
TAIR AT5G39990 : Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
RAP-DB (Rice) LOC_Os06g40060.1 : glycosyltransferase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a042236 , Zm00025a051187
Brachypodium KQJ85585 , KQK17772 , KQK03198
Barley HORVU4Hr1G005140.4 , HORVU4Hr1G005140.1 , HORVU4Hr1G005140.2 , HORVU4Hr1G005140.3 , HORVU3Hr1G026890.4 , HORVU3Hr1G026890.5 , HORVU3Hr1G026890.1 , HORVU3Hr1G026890.3 , HORVU7Hr1G121520.4 , HORVU7Hr1G121520.5 , HORVU7Hr1G121520.2 , HORVU7Hr1G121520.3 , HORVU5Hr1G000700.5 , HORVU5Hr1G000700.6 , HORVU7Hr1G083990.6 , HORVU7Hr1G083990.4 , HORVU7Hr1G083990.5 , HORVU7Hr1G083990.2 , HORVU7Hr1G083990.3 , HORVU7Hr1G083990.1
Wheat TraesCS7B02G475200 , TraesCS7B02G418200 , TraesCS5A02G003200 , TraesCS5A02G003200 , TraesCS4D02G029400 , TraesCS1D02G137800 , TraesCS3B02G158500 , TraesCS3A02G313400 , TraesCS7B02G252700 , TraesCS7A02G551700 , TraesCS5B02G003400 , TraesCS3D02G140900 , TraesCS7D02G348700 , TraesCS5D02G003900 , TraesCS1A02G136900 , TraesCS7A02G374700 , TraesCS7A02G551800 , TraesCS1B02G155300 , TraesCS4B02G031700 , TraesCS4A02G281300
Populus -


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cDNA sequences
Sobic.010G184300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G431000 transporter, putative, expressed -
2 Sobic.004G228800 LMBR1 integral membrane protein, putative, expressed -
3 Sobic.005G177700 transmembrane protein 49, putative, expressed -
4 Sobic.010G064600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@LIM domain-containing protein, putative, expressed -
5 Sobic.004G236200 SEC6, putative, expressed K06110: EXOC3, exocyst complex component 3
6 Sobic.003G270600 adaptor complexes medium subunit family domain containing protein, expressed K12393: AP-1 complex subunit mu
7 Sobic.003G087000 expressed protein -
8 Sobic.004G241900 OsDegp3 - Putative Deg protease homologue, expressed -
9 Sobic.007G056100 expressed protein K15077: elongin-A
10 Sobic.003G377000 powdery mildew resistant protein 5, putative, expressed -
11 Sobic.010G261600 ubiquitin interaction motif family protein, expressed -
12 Sobic.006G217300 NAD dependent epimerase/dehydratase family domain containing protein, expressed K12448: UXE, UDP-arabinose 4-epimerase
13 Sobic.005G059600 WD domain, G-beta repeat domain containing protein, expressed -
14 Sobic.006G260500 expressed protein -
15 Sobic.002G265300 acyl-coenzyme A thioesterase 10, mitochondrial precursor, putative, expressed K17361: acyl-coenzyme A thioesterase 9
16 Sobic.008G093000 ABC transporter, ATP-binding protein, putative, expressed K06185: ATP-binding cassette, subfamily F, member 2
17 Sobic.006G232000 glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
18 Sobic.002G268800 arsenical pump-driving ATPase, putative, expressed K01551: arsA, ASNA1, arsenite/tail-anchored protein-transporting ATPase
19 Sobic.002G156000 -(PubMedID : 29751546)@transporter, monovalent cation:proton antiporter-2 family, putative, expressed K14724: SLC9A8, solute carrier family 9 (sodium/hydrogen exchanger), member 8
20 Sobic.001G465400 dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial precursor, putative, expressed K00658: DLST, 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase)


Gene co-expression network
sample Sobic010G184300 Sobic010G184300 Sobic002G431000 Sobic002G431000 Sobic010G184300--Sobic002G431000 Sobic004G228800 Sobic004G228800 Sobic010G184300--Sobic004G228800 Sobic005G177700 Sobic005G177700 Sobic010G184300--Sobic005G177700 Sobic010G064600 Sobic010G064600 Sobic010G184300--Sobic010G064600 Sobic004G236200 Sobic004G236200 Sobic010G184300--Sobic004G236200 Sobic003G270600 Sobic003G270600 Sobic010G184300--Sobic003G270600 Sobic003G087000 Sobic003G087000 Sobic010G184300--Sobic003G087000 Sobic004G241900 Sobic004G241900 Sobic010G184300--Sobic004G241900 Sobic007G056100 Sobic007G056100 Sobic010G184300--Sobic007G056100 Sobic002G431000--Sobic010G184300 Sobic002G295700 Sobic002G295700 Sobic002G431000--Sobic002G295700 Sobic003G377000 Sobic003G377000 Sobic002G431000--Sobic003G377000 Sobic001G457700 Sobic001G457700 Sobic002G431000--Sobic001G457700 Sobic002G431000--Sobic004G236200 Sobic002G431000--Sobic005G177700 Sobic004G112900 Sobic004G112900 Sobic002G431000--Sobic004G112900 Sobic002G431000--Sobic007G056100 Sobic002G431000--Sobic010G064600 Sobic004G261600 Sobic004G261600 Sobic004G228800--Sobic004G261600 Sobic010G261600 Sobic010G261600 Sobic004G228800--Sobic010G261600 Sobic004G323700 Sobic004G323700 Sobic004G228800--Sobic004G323700 Sobic010G278200 Sobic010G278200 Sobic004G228800--Sobic010G278200 Sobic004G228800--Sobic004G236200 Sobic006G131000 Sobic006G131000 Sobic004G228800--Sobic006G131000 Sobic004G228800--Sobic005G177700 Sobic007G056600 Sobic007G056600 Sobic004G228800--Sobic007G056600 Sobic003G126300 Sobic003G126300 Sobic004G228800--Sobic003G126300 Sobic003G316200 Sobic003G316200 Sobic005G177700--Sobic003G316200 Sobic005G177700--Sobic007G056100 Sobic002G355800 Sobic002G355800 Sobic005G177700--Sobic002G355800 Sobic006G077300 Sobic006G077300 Sobic005G177700--Sobic006G077300 Sobic009G041700 Sobic009G041700 Sobic005G177700--Sobic009G041700 Sobic001G253300 Sobic001G253300 Sobic005G177700--Sobic001G253300 Sobic005G177700--Sobic004G228800 Sobic003G365100 Sobic003G365100 Sobic005G177700--Sobic003G365100 Sobic002G268800 Sobic002G268800 Sobic005G177700--Sobic002G268800 Sobic010G064600--Sobic003G087000 Sobic008G093000 Sobic008G093000 Sobic010G064600--Sobic008G093000 Sobic010G064600--Sobic010G261600 Sobic010G064600--Sobic004G228800 Sobic010G064600--Sobic010G184300 Sobic006G281800 Sobic006G281800 Sobic010G064600--Sobic006G281800 Sobic009G072700 Sobic009G072700 Sobic010G064600--Sobic009G072700 Sobic001G089800 Sobic001G089800 Sobic010G064600--Sobic001G089800 Sobic001G003000 Sobic001G003000 Sobic010G064600--Sobic001G003000 Sobic004G236200--Sobic003G270600 Sobic001G056800 Sobic001G056800 Sobic004G236200--Sobic001G056800 Sobic004G236200--Sobic006G077300 Sobic004G236200--Sobic004G228800 Sobic006G203300 Sobic006G203300 Sobic004G236200--Sobic006G203300 Sobic003G427600 Sobic003G427600 Sobic004G236200--Sobic003G427600 Sobic003G394200 Sobic003G394200 Sobic004G236200--Sobic003G394200 Sobic007G205900 Sobic007G205900 Sobic004G236200--Sobic007G205900 Sobic002G156000 Sobic002G156000 Sobic004G236200--Sobic002G156000 Sobic003G270600--Sobic004G236200 Sobic003G270600--Sobic003G394200 Sobic009G229600 Sobic009G229600 Sobic003G270600--Sobic009G229600 Sobic003G270600--Sobic003G427600 Sobic009G226400 Sobic009G226400 Sobic003G270600--Sobic009G226400 Sobic004G039600 Sobic004G039600 Sobic003G270600--Sobic004G039600 Sobic001G369000 Sobic001G369000 Sobic003G270600--Sobic001G369000 Sobic009G049400 Sobic009G049400 Sobic003G270600--Sobic009G049400 Sobic003G270600--Sobic004G228800 Sobic003G087000--Sobic010G064600 Sobic003G087000--Sobic010G261600 Sobic006G114400 Sobic006G114400 Sobic003G087000--Sobic006G114400 Sobic003G087000--Sobic008G093000 Sobic007G075500 Sobic007G075500 Sobic003G087000--Sobic007G075500 Sobic009G225000 Sobic009G225000 Sobic003G087000--Sobic009G225000 Sobic003G087000--Sobic004G228800 Sobic003G312200 Sobic003G312200 Sobic003G087000--Sobic003G312200 Sobic009G139800 Sobic009G139800 Sobic003G087000--Sobic009G139800 Sobic007G005500 Sobic007G005500 Sobic004G241900--Sobic007G005500 Sobic006G260500 Sobic006G260500 Sobic004G241900--Sobic006G260500 Sobic003G209200 Sobic003G209200 Sobic004G241900--Sobic003G209200 Sobic005G062200 Sobic005G062200 Sobic004G241900--Sobic005G062200 Sobic003G114400 Sobic003G114400 Sobic004G241900--Sobic003G114400 Sobic006G196300 Sobic006G196300 Sobic004G241900--Sobic006G196300 Sobic006G277000 Sobic006G277000 Sobic004G241900--Sobic006G277000 Sobic001G263600 Sobic001G263600 Sobic004G241900--Sobic001G263600 Sobic004G241900--Sobic004G261600 Sobic007G056100--Sobic005G177700 Sobic010G243400 Sobic010G243400 Sobic007G056100--Sobic010G243400 Sobic007G056100--Sobic002G355800 Sobic009G224000 Sobic009G224000 Sobic007G056100--Sobic009G224000 Sobic003G199500 Sobic003G199500 Sobic007G056100--Sobic003G199500 Sobic001G421400 Sobic001G421400 Sobic007G056100--Sobic001G421400 Sobic007G056100--Sobic010G261600 Sobic002G303600 Sobic002G303600 Sobic007G056100--Sobic002G303600 Sobic001G465400 Sobic001G465400 Sobic007G056100--Sobic001G465400
Octagon: transcription factors


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