Gene annotation
Transcriptome id Sobic.006G217300.3,Sobic.006G217300.2,Sobic.006G217300.1
Synonym UXE1, MUR4, Sb06g028720, HSR8
Functional annotation NAD dependent epimerase/dehydratase family domain containing protein, expressed
UniProt A0A1B6PN90
Pfam PF02719
Panther DB PTHR10366 PTHR10366:SF358
NCBI CDD KOG1371; UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase
KEGG Orthology K12448; UXE, UDP-arabinose 4-epimerase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G30620 : NAD(P)-binding Rossmann-fold superfamily protein
RAP-DB (Rice) LOC_Os04g52730.1 : NAD dependent epimerase/dehydratase family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a009754 , Zm00025a057041
Brachypodium KQJ84630 , KQJ84629
Barley HORVU2Hr1G104110.5 , HORVU2Hr1G104110.7 , HORVU2Hr1G104110.6 , HORVU2Hr1G104110.1 , HORVU2Hr1G104110.3 , HORVU2Hr1G104110.2 , HORVU2Hr1G104110.4
Wheat TraesCS2A02G460400 , TraesCS2B02G482000 , TraesCS2D02G460600
Populus -


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cDNA sequences
Sobic.006G217300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G122500 SNARE associated Golgi protein, putative, expressed -
2 Sobic.006G207900 DNA binding protein, putative, expressed -
3 Sobic.007G026800 actin, putative, expressed K18584: ACTR3, actin-related protein 3
4 Sobic.003G043800 BT1 family protein, putative, expressed -
5 Sobic.010G064600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@LIM domain-containing protein, putative, expressed -
6 Sobic.001G312500 protein phosphatase 2C, putative, expressed K14803: protein phosphatase PTC2/3
7 Sobic.002G431000 transporter, putative, expressed -
8 Sobic.010G184300 glycosyltransferase family protein, putative, expressed K00771: protein xylosyltransferase
9 Sobic.004G228800 LMBR1 integral membrane protein, putative, expressed -
10 Sobic.003G377000 powdery mildew resistant protein 5, putative, expressed -
11 Sobic.003G126300 OsRhmbd2 - Putative Rhomboid homologue, expressed -
12 Sobic.004G100200 protein phosphatase 1 regulatory subunit SDS22, putative, expressed K17550: PPP1R7, protein phosphatase 1 regulatory subunit 7
13 Sobic.004G124500 transporter family protein, putative, expressed -
14 Sobic.008G141800 Probable galacturonosyltransferase 13(PubMedID : 26186930)@glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
15 Sobic.009G179600 expressed protein -
16 Sobic.001G457700 expressed protein -
17 Sobic.004G207900 nucleotide-sugar transporter family protein, putative, expressed -
18 Sobic.001G409900 transporter, putative, expressed -
19 Sobic.001G214200 lysM domain containing protein, putative, expressed -
20 Sobic.005G177700 transmembrane protein 49, putative, expressed -


Gene co-expression network
sample Sobic006G217300 Sobic006G217300 Sobic001G122500 Sobic001G122500 Sobic006G217300--Sobic001G122500 Sobic006G207900 Sobic006G207900 Sobic006G217300--Sobic006G207900 Sobic007G026800 Sobic007G026800 Sobic006G217300--Sobic007G026800 Sobic003G043800 Sobic003G043800 Sobic006G217300--Sobic003G043800 Sobic010G064600 Sobic010G064600 Sobic006G217300--Sobic010G064600 Sobic001G312500 Sobic001G312500 Sobic006G217300--Sobic001G312500 Sobic002G431000 Sobic002G431000 Sobic006G217300--Sobic002G431000 Sobic010G184300 Sobic010G184300 Sobic006G217300--Sobic010G184300 Sobic004G228800 Sobic004G228800 Sobic006G217300--Sobic004G228800 Sobic001G122500--Sobic006G217300 Sobic001G214200 Sobic001G214200 Sobic001G122500--Sobic001G214200 Sobic004G350300 Sobic004G350300 Sobic001G122500--Sobic004G350300 Sobic006G263100 Sobic006G263100 Sobic001G122500--Sobic006G263100 Sobic010G188100 Sobic010G188100 Sobic001G122500--Sobic010G188100 Sobic003G002400 Sobic003G002400 Sobic001G122500--Sobic003G002400 Sobic010G026700 Sobic010G026700 Sobic001G122500--Sobic010G026700 Sobic001G409900 Sobic001G409900 Sobic001G122500--Sobic001G409900 Sobic002G214900 Sobic002G214900 Sobic001G122500--Sobic002G214900 Sobic006G207900--Sobic006G217300 Sobic009G169400 Sobic009G169400 Sobic006G207900--Sobic009G169400 Sobic003G272400 Sobic003G272400 Sobic006G207900--Sobic003G272400 Sobic006G207900--Sobic003G043800 Sobic003G126300 Sobic003G126300 Sobic006G207900--Sobic003G126300 Sobic006G207900--Sobic001G312500 Sobic004G207900 Sobic004G207900 Sobic006G207900--Sobic004G207900 Sobic006G207900--Sobic001G122500 Sobic004G124500 Sobic004G124500 Sobic006G207900--Sobic004G124500 Sobic007G026800--Sobic006G217300 Sobic003G377000 Sobic003G377000 Sobic007G026800--Sobic003G377000 Sobic005G177700 Sobic005G177700 Sobic007G026800--Sobic005G177700 Sobic007G026800--Sobic010G064600 Sobic007G056100 Sobic007G056100 Sobic007G026800--Sobic007G056100 Sobic007G026800--Sobic001G312500 Sobic007G026800--Sobic004G228800 Sobic009G072700 Sobic009G072700 Sobic007G026800--Sobic009G072700 Sobic007G026800--Sobic002G431000 Sobic003G043800--Sobic006G217300 Sobic003G043800--Sobic001G122500 Sobic010G026300 Sobic010G026300 Sobic003G043800--Sobic010G026300 Sobic003G043800--Sobic004G124500 Sobic003G043800--Sobic004G207900 Sobic001G378200 Sobic001G378200 Sobic003G043800--Sobic001G378200 Sobic003G043800--Sobic006G207900 Sobic006G055400 Sobic006G055400 Sobic003G043800--Sobic006G055400 Sobic005G207400 Sobic005G207400 Sobic003G043800--Sobic005G207400 Sobic003G087000 Sobic003G087000 Sobic010G064600--Sobic003G087000 Sobic008G093000 Sobic008G093000 Sobic010G064600--Sobic008G093000 Sobic010G261600 Sobic010G261600 Sobic010G064600--Sobic010G261600 Sobic010G064600--Sobic004G228800 Sobic010G064600--Sobic010G184300 Sobic006G281800 Sobic006G281800 Sobic010G064600--Sobic006G281800 Sobic010G064600--Sobic009G072700 Sobic001G089800 Sobic001G089800 Sobic010G064600--Sobic001G089800 Sobic001G003000 Sobic001G003000 Sobic010G064600--Sobic001G003000 Sobic001G511300 Sobic001G511300 Sobic001G312500--Sobic001G511300 Sobic001G312500--Sobic006G217300 Sobic001G312500--Sobic001G378200 Sobic003G202600 Sobic003G202600 Sobic001G312500--Sobic003G202600 Sobic001G312500--Sobic005G207400 Sobic004G100200 Sobic004G100200 Sobic001G312500--Sobic004G100200 Sobic001G312500--Sobic007G026800 Sobic001G312500--Sobic003G043800 Sobic002G214400 Sobic002G214400 Sobic001G312500--Sobic002G214400 Sobic002G431000--Sobic010G184300 Sobic002G295700 Sobic002G295700 Sobic002G431000--Sobic002G295700 Sobic002G431000--Sobic003G377000 Sobic001G457700 Sobic001G457700 Sobic002G431000--Sobic001G457700 Sobic004G236200 Sobic004G236200 Sobic002G431000--Sobic004G236200 Sobic002G431000--Sobic005G177700 Sobic004G112900 Sobic004G112900 Sobic002G431000--Sobic004G112900 Sobic002G431000--Sobic007G056100 Sobic002G431000--Sobic010G064600 Sobic010G184300--Sobic002G431000 Sobic010G184300--Sobic004G228800 Sobic010G184300--Sobic005G177700 Sobic010G184300--Sobic010G064600 Sobic010G184300--Sobic004G236200 Sobic003G270600 Sobic003G270600 Sobic010G184300--Sobic003G270600 Sobic010G184300--Sobic003G087000 Sobic004G241900 Sobic004G241900 Sobic010G184300--Sobic004G241900 Sobic010G184300--Sobic007G056100 Sobic004G261600 Sobic004G261600 Sobic004G228800--Sobic004G261600 Sobic004G228800--Sobic010G261600 Sobic004G323700 Sobic004G323700 Sobic004G228800--Sobic004G323700 Sobic010G278200 Sobic010G278200 Sobic004G228800--Sobic010G278200 Sobic004G228800--Sobic004G236200 Sobic006G131000 Sobic006G131000 Sobic004G228800--Sobic006G131000 Sobic004G228800--Sobic005G177700 Sobic007G056600 Sobic007G056600 Sobic004G228800--Sobic007G056600 Sobic004G228800--Sobic003G126300
Octagon: transcription factors


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