Gene annotation
Transcriptome id Sobic.004G124500.1,Sobic.004G124500.2
Synonym Sb04g010400
Functional annotation transporter family protein, putative, expressed
UniProt C5Y012
Pfam PF07690
Panther DB PTHR23503:SF37 PTHR23503
NCBI CDD KOG0254; Predicted transporter (major facilitator superfamily)
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT1G67300 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os02g17500.2,LOC_Os02g17500.1 : transporter family protein, putative, expressed
MaizeGDB (Corn) Zm00025a034369
Brachypodium KQJ94383 , KQJ94384
Barley HORVU7Hr1G115370.3 , HORVU7Hr1G115370.1 , HORVU7Hr1G115370.5 , HORVU7Hr1G115370.8 , HORVU7Hr1G115370.14 , HORVU7Hr1G115370.16 , HORVU7Hr1G115370.17 , HORVU7Hr1G115370.18 , HORVU7Hr1G115370.19 , HORVU7Hr1G115370.10 , HORVU7Hr1G115370.11 , HORVU7Hr1G115370.12 , HORVU7Hr1G115370.15 , HORVU7Hr1G115370.2 , HORVU7Hr1G115370.6 , HORVU7Hr1G115370.9 , HORVU7Hr1G115370.7 , HORVU7Hr1G115370.25 , HORVU7Hr1G115370.24 , HORVU7Hr1G115370.21 , HORVU7Hr1G115370.23 , HORVU7Hr1G115370.22
Wheat TraesCS7D02G506800 , TraesCS7D02G506800 , TraesCS7D02G506800 , TraesCS7D02G506800 , TraesCS7A02G516600 , TraesCS7A02G516600 , TraesCS7B02G432900 , TraesCS7B02G432900 , TraesCS7B02G432900
Populus -


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cDNA sequences
Sobic.004G124500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G056600 expressed protein -
2 Sobic.007G180600 UBX domain-containing protein, putative, expressed -
3 Sobic.003G269800 phosphatidylinositol transfer, putative, expressed -
4 Sobic.004G100200 protein phosphatase 1 regulatory subunit SDS22, putative, expressed K17550: PPP1R7, protein phosphatase 1 regulatory subunit 7
5 Sobic.003G043800 BT1 family protein, putative, expressed -
6 Sobic.004G228800 LMBR1 integral membrane protein, putative, expressed -
7 Sobic.004G207900 nucleotide-sugar transporter family protein, putative, expressed -
8 Sobic.009G099200 VHS and GAT domain containing protein, expressed -
9 Sobic.004G236200 SEC6, putative, expressed K06110: EXOC3, exocyst complex component 3
10 Sobic.003G036500 fruit protein PKIWI502, putative, expressed -
11 Sobic.005G017200 cytidylyltransferase domain containing protein, expressed K00967: ethanolamine-phosphate cytidylyltransferase
12 Sobic.002G028700 succinate dehydrogenase flavoprotein subunit,mitochondrial precursor, putative, expressed K00234: SDHA, succinate dehydrogenase (ubiquinone) flavoprotein subunit
13 Sobic.009G077600 glycosyl hydrolase family 47 domain contain protein, expressed K01230: MAN1A_C, mannosyl-oligosaccharide alpha-1,2-mannosidase
14 Sobic.006G077300 expressed protein K17637: EXOC2, exocyst complex component 2
15 Sobic.003G126300 OsRhmbd2 - Putative Rhomboid homologue, expressed -
16 Sobic.006G217300 NAD dependent epimerase/dehydratase family domain containing protein, expressed K12448: UXE, UDP-arabinose 4-epimerase
17 Sobic.003G209200 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
18 Sobic.004G078700 tubulin binding cofactor C, putative, expressed K16810: TBCC domain-containing protein 1
19 Sobic.003G119700 zinc finger, C3HC4 type domain containing protein, expressed -
20 Sobic.001G522100 transporter, monovalent cation:proton antiporter-2 family, putative, expressed -


Gene co-expression network
sample Sobic004G124500 Sobic004G124500 Sobic007G056600 Sobic007G056600 Sobic004G124500--Sobic007G056600 Sobic007G180600 Sobic007G180600 Sobic004G124500--Sobic007G180600 Sobic003G269800 Sobic003G269800 Sobic004G124500--Sobic003G269800 Sobic004G100200 Sobic004G100200 Sobic004G124500--Sobic004G100200 Sobic003G043800 Sobic003G043800 Sobic004G124500--Sobic003G043800 Sobic004G228800 Sobic004G228800 Sobic004G124500--Sobic004G228800 Sobic004G207900 Sobic004G207900 Sobic004G124500--Sobic004G207900 Sobic009G099200 Sobic009G099200 Sobic004G124500--Sobic009G099200 Sobic004G236200 Sobic004G236200 Sobic004G124500--Sobic004G236200 Sobic004G261600 Sobic004G261600 Sobic007G056600--Sobic004G261600 Sobic007G056600--Sobic004G228800 Sobic007G203300 Sobic007G203300 Sobic007G056600--Sobic007G203300 Sobic010G232600 Sobic010G232600 Sobic007G056600--Sobic010G232600 Sobic006G077300 Sobic006G077300 Sobic007G056600--Sobic006G077300 Sobic007G056600--Sobic004G124500 Sobic003G126300 Sobic003G126300 Sobic007G056600--Sobic003G126300 Sobic003G119700 Sobic003G119700 Sobic007G056600--Sobic003G119700 Sobic001G251200 Sobic001G251200 Sobic007G056600--Sobic001G251200 Sobic007G180600--Sobic001G251200 Sobic007G180600--Sobic004G228800 Sobic006G131000 Sobic006G131000 Sobic007G180600--Sobic006G131000 Sobic008G185500 Sobic008G185500 Sobic007G180600--Sobic008G185500 Sobic001G477700 Sobic001G477700 Sobic007G180600--Sobic001G477700 Sobic001G522100 Sobic001G522100 Sobic007G180600--Sobic001G522100 Sobic007G180600--Sobic004G261600 Sobic007G042900 Sobic007G042900 Sobic007G180600--Sobic007G042900 Sobic004G257200 Sobic004G257200 Sobic007G180600--Sobic004G257200 Sobic009G118600 Sobic009G118600 Sobic003G269800--Sobic009G118600 Sobic001G217400 Sobic001G217400 Sobic003G269800--Sobic001G217400 Sobic003G269800--Sobic004G124500 Sobic001G409300 Sobic001G409300 Sobic003G269800--Sobic001G409300 Sobic003G269800--Sobic007G056600 Sobic003G269800--Sobic003G126300 Sobic001G399800 Sobic001G399800 Sobic003G269800--Sobic001G399800 Sobic004G211900 Sobic004G211900 Sobic003G269800--Sobic004G211900 Sobic003G281900 Sobic003G281900 Sobic003G269800--Sobic003G281900 Sobic004G078700 Sobic004G078700 Sobic004G100200--Sobic004G078700 Sobic007G005500 Sobic007G005500 Sobic004G100200--Sobic007G005500 Sobic006G260500 Sobic006G260500 Sobic004G100200--Sobic006G260500 Sobic003G209200 Sobic003G209200 Sobic004G100200--Sobic003G209200 Sobic009G077600 Sobic009G077600 Sobic004G100200--Sobic009G077600 Sobic010G169900 Sobic010G169900 Sobic004G100200--Sobic010G169900 Sobic003G346400 Sobic003G346400 Sobic004G100200--Sobic003G346400 Sobic004G100200--Sobic004G207900 Sobic004G241900 Sobic004G241900 Sobic004G100200--Sobic004G241900 Sobic006G217300 Sobic006G217300 Sobic003G043800--Sobic006G217300 Sobic001G122500 Sobic001G122500 Sobic003G043800--Sobic001G122500 Sobic010G026300 Sobic010G026300 Sobic003G043800--Sobic010G026300 Sobic003G043800--Sobic004G124500 Sobic003G043800--Sobic004G207900 Sobic001G378200 Sobic001G378200 Sobic003G043800--Sobic001G378200 Sobic006G207900 Sobic006G207900 Sobic003G043800--Sobic006G207900 Sobic006G055400 Sobic006G055400 Sobic003G043800--Sobic006G055400 Sobic005G207400 Sobic005G207400 Sobic003G043800--Sobic005G207400 Sobic004G228800--Sobic004G261600 Sobic010G261600 Sobic010G261600 Sobic004G228800--Sobic010G261600 Sobic004G323700 Sobic004G323700 Sobic004G228800--Sobic004G323700 Sobic010G278200 Sobic010G278200 Sobic004G228800--Sobic010G278200 Sobic004G228800--Sobic004G236200 Sobic004G228800--Sobic006G131000 Sobic005G177700 Sobic005G177700 Sobic004G228800--Sobic005G177700 Sobic004G228800--Sobic007G056600 Sobic004G228800--Sobic003G126300 Sobic001G161700 Sobic001G161700 Sobic004G207900--Sobic001G161700 Sobic004G207900--Sobic009G077600 Sobic004G207900--Sobic004G100200 Sobic001G023100 Sobic001G023100 Sobic004G207900--Sobic001G023100 Sobic004G207900--Sobic003G346400 Sobic004G025300 Sobic004G025300 Sobic004G207900--Sobic004G025300 Sobic002G141700 Sobic002G141700 Sobic004G207900--Sobic002G141700 Sobic008G129600 Sobic008G129600 Sobic004G207900--Sobic008G129600 Sobic002G294100 Sobic002G294100 Sobic004G207900--Sobic002G294100 Sobic009G099200--Sobic007G180600 Sobic009G099200--Sobic010G169900 Sobic009G099200--Sobic004G124500 Sobic006G101800 Sobic006G101800 Sobic009G099200--Sobic006G101800 Sobic003G302200 Sobic003G302200 Sobic009G099200--Sobic003G302200 Sobic006G210700 Sobic006G210700 Sobic009G099200--Sobic006G210700 Sobic002G313900 Sobic002G313900 Sobic009G099200--Sobic002G313900 Sobic009G099200--Sobic001G251200 Sobic009G249700 Sobic009G249700 Sobic009G099200--Sobic009G249700 Sobic003G270600 Sobic003G270600 Sobic004G236200--Sobic003G270600 Sobic001G056800 Sobic001G056800 Sobic004G236200--Sobic001G056800 Sobic004G236200--Sobic006G077300 Sobic004G236200--Sobic004G228800 Sobic006G203300 Sobic006G203300 Sobic004G236200--Sobic006G203300 Sobic003G427600 Sobic003G427600 Sobic004G236200--Sobic003G427600 Sobic003G394200 Sobic003G394200 Sobic004G236200--Sobic003G394200 Sobic007G205900 Sobic007G205900 Sobic004G236200--Sobic007G205900 Sobic002G156000 Sobic002G156000 Sobic004G236200--Sobic002G156000
Octagon: transcription factors


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