Gene annotation
Transcriptome id Sobic.005G017200.1
Synonym PECT1, Sb05g001470
Functional annotation cytidylyltransferase domain containing protein, expressed
UniProt C5Y3K8
Pfam PF01467
Panther DB PTHR10739 PTHR10739:SF29
NCBI CDD -
KEGG Orthology K00967; ethanolamine-phosphate cytidylyltransferase
Gene Ontology GO:0009058; biosynthetic process GO:0003824catalytic activity


Orthologs (automatic annotation)
TAIR AT2G38670 : phosphorylethanolamine cytidylyltransferase 1
RAP-DB (Rice) LOC_Os12g02820.1 : cytidylyltransferase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a033332 , Zm00025a013157
Brachypodium KQK19534 , KQJ89491 , PNT65544 , KQJ92507
Barley HORVU5Hr1G045990.2 , HORVU5Hr1G045990.3 , HORVU4Hr1G023860.3 , HORVU4Hr1G023860.2 , HORVU4Hr1G023860.1 , HORVU4Hr1G023860.7 , HORVU4Hr1G023860.6 , HORVU4Hr1G023860.5 , HORVU4Hr1G023860.4 , HORVU4Hr1G023860.9 , HORVU4Hr1G023860.8
Wheat TraesCS4B02G123900 , TraesCS5B02G143400 , TraesCS5A02G144300 , TraesCS4A02G191400 , TraesCS5D02G147700 , TraesCS4D02G121900
Populus PNT31033 , PNT31032


JBrowse

Open New Page


cDNA sequences
Sobic.005G017200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G314300 WD domain, G-beta repeat domain containing protein, expressed -
2 Sobic.001G097500 expressed protein -
3 Sobic.001G356100 GPI-anchored wall transfer protein 1, putative, expressed K05283: glucosaminylphosphatidylinositol acyltransferase
4 Sobic.009G128500 CBS domain containing protein, expressed K16302: metal transporter CNNM
5 Sobic.005G114500 growth regulator related protein, putative, expressed -
6 Sobic.001G193100 expressed protein -
7 Sobic.004G078700 tubulin binding cofactor C, putative, expressed K16810: TBCC domain-containing protein 1
8 Sobic.002G290100 expressed protein K08739: DNA mismatch repair protein MLH3
9 Sobic.003G230600 transcription factor X1, putative, expressed -
10 Sobic.007G118500 galactosyltransferase family protein, putative, expressed -
11 Sobic.010G223400 expressed protein -
12 Sobic.003G193500 CK1_CaseinKinase_1.2 - CK1 includes the casein kinase 1 kinases, expressed K02218: CSNK1, casein kinase 1
13 Sobic.001G034000 mTERF family protein, expressed K15032: mTERF domain-containing protein, mitochondrial
14 Sobic.004G124500 transporter family protein, putative, expressed -
15 Sobic.004G094700 ATP synthase, putative, expressed K02147: ATPeV1B, V-type H+-transporting ATPase subunit B
16 Sobic.004G263500 DnaK family protein, putative, expressed K09486: hypoxia up-regulated 1
17 Sobic.010G133400 pantothenate kinase 4, putative, expressed -
18 Sobic.004G100200 protein phosphatase 1 regulatory subunit SDS22, putative, expressed K17550: PPP1R7, protein phosphatase 1 regulatory subunit 7
19 Sobic.004G207900 nucleotide-sugar transporter family protein, putative, expressed -
20 Sobic.008G019532 - -


Gene co-expression network
sample Sobic005G017200 Sobic005G017200 Sobic003G314300 Sobic003G314300 Sobic005G017200--Sobic003G314300 Sobic001G097500 Sobic001G097500 Sobic005G017200--Sobic001G097500 Sobic001G356100 Sobic001G356100 Sobic005G017200--Sobic001G356100 Sobic009G128500 Sobic009G128500 Sobic005G017200--Sobic009G128500 Sobic005G114500 Sobic005G114500 Sobic005G017200--Sobic005G114500 Sobic001G193100 Sobic001G193100 Sobic005G017200--Sobic001G193100 Sobic004G078700 Sobic004G078700 Sobic005G017200--Sobic004G078700 Sobic002G290100 Sobic002G290100 Sobic005G017200--Sobic002G290100 Sobic003G230600 Sobic003G230600 Sobic005G017200--Sobic003G230600 Sobic003G314300--Sobic001G097500 Sobic003G314300--Sobic005G017200 Sobic010G223400 Sobic010G223400 Sobic003G314300--Sobic010G223400 Sobic003G314300--Sobic001G193100 Sobic003G314300--Sobic005G114500 Sobic003G314300--Sobic009G128500 Sobic004G207900 Sobic004G207900 Sobic003G314300--Sobic004G207900 Sobic001G097900 Sobic001G097900 Sobic003G314300--Sobic001G097900 Sobic003G314300--Sobic002G290100 Sobic001G097500--Sobic005G114500 Sobic001G474400 Sobic001G474400 Sobic001G097500--Sobic001G474400 Sobic009G003700 Sobic009G003700 Sobic001G097500--Sobic009G003700 Sobic001G097500--Sobic003G314300 Sobic003G182300 Sobic003G182300 Sobic001G097500--Sobic003G182300 Sobic001G012900 Sobic001G012900 Sobic001G097500--Sobic001G012900 Sobic001G097500--Sobic010G223400 Sobic006G203300 Sobic006G203300 Sobic001G097500--Sobic006G203300 Sobic001G097500--Sobic001G193100 Sobic004G263500 Sobic004G263500 Sobic001G356100--Sobic004G263500 Sobic007G118500 Sobic007G118500 Sobic001G356100--Sobic007G118500 Sobic003G394500 Sobic003G394500 Sobic001G356100--Sobic003G394500 Sobic001G455000 Sobic001G455000 Sobic001G356100--Sobic001G455000 Sobic006G232800 Sobic006G232800 Sobic001G356100--Sobic006G232800 Sobic006G060000 Sobic006G060000 Sobic001G356100--Sobic006G060000 Sobic004G350700 Sobic004G350700 Sobic001G356100--Sobic004G350700 Sobic001G114200 Sobic001G114200 Sobic001G356100--Sobic001G114200 Sobic010G133400 Sobic010G133400 Sobic001G356100--Sobic010G133400 Sobic010G169900 Sobic010G169900 Sobic009G128500--Sobic010G169900 Sobic001G308400 Sobic001G308400 Sobic009G128500--Sobic001G308400 Sobic003G193500 Sobic003G193500 Sobic009G128500--Sobic003G193500 Sobic009G122500 Sobic009G122500 Sobic009G128500--Sobic009G122500 Sobic002G355800 Sobic002G355800 Sobic009G128500--Sobic002G355800 Sobic009G116900 Sobic009G116900 Sobic009G128500--Sobic009G116900 Sobic009G128500--Sobic010G223400 Sobic003G021600 Sobic003G021600 Sobic009G128500--Sobic003G021600 Sobic001G490900 Sobic001G490900 Sobic009G128500--Sobic001G490900 Sobic003G130900 Sobic003G130900 Sobic005G114500--Sobic003G130900 Sobic005G114500--Sobic003G230600 Sobic005G114500--Sobic001G474400 Sobic005G114500--Sobic010G223400 Sobic005G114500--Sobic001G308400 Sobic003G005900 Sobic003G005900 Sobic005G114500--Sobic003G005900 Sobic005G059500 Sobic005G059500 Sobic005G114500--Sobic005G059500 Sobic005G110499 Sobic005G110499 Sobic005G114500--Sobic005G110499 Sobic005G114500--Sobic009G122500 Sobic001G193100--Sobic010G223400 Sobic003G394200 Sobic003G394200 Sobic001G193100--Sobic003G394200 Sobic001G193100--Sobic001G012900 Sobic001G061200 Sobic001G061200 Sobic001G193100--Sobic001G061200 Sobic007G173700 Sobic007G173700 Sobic001G193100--Sobic007G173700 Sobic004G084500 Sobic004G084500 Sobic001G193100--Sobic004G084500 Sobic004G060300 Sobic004G060300 Sobic001G193100--Sobic004G060300 Sobic001G193100--Sobic004G078700 Sobic010G074900 Sobic010G074900 Sobic001G193100--Sobic010G074900 Sobic001G389200 Sobic001G389200 Sobic004G078700--Sobic001G389200 Sobic001G465400 Sobic001G465400 Sobic004G078700--Sobic001G465400 Sobic004G100200 Sobic004G100200 Sobic004G078700--Sobic004G100200 Sobic004G078700--Sobic010G223400 Sobic004G078700--Sobic002G355800 Sobic004G254800 Sobic004G254800 Sobic004G078700--Sobic004G254800 Sobic004G078700--Sobic007G118500 Sobic001G378200 Sobic001G378200 Sobic004G078700--Sobic001G378200 Sobic003G316200 Sobic003G316200 Sobic004G078700--Sobic003G316200 Sobic002G290100--Sobic001G356100 Sobic002G290100--Sobic003G314300 Sobic002G290100--Sobic009G128500 Sobic002G290100--Sobic005G017200 Sobic003G435400 Sobic003G435400 Sobic002G290100--Sobic003G435400 Sobic006G112500 Sobic006G112500 Sobic002G290100--Sobic006G112500 Sobic005G087300 Sobic005G087300 Sobic002G290100--Sobic005G087300 Sobic004G049200 Sobic004G049200 Sobic002G290100--Sobic004G049200 Sobic002G290100--Sobic009G116900 Sobic003G230600--Sobic005G114500 Sobic001G125500 Sobic001G125500 Sobic003G230600--Sobic001G125500 Sobic003G230600--Sobic009G128500 Sobic003G230600--Sobic001G308400 Sobic007G145400 Sobic007G145400 Sobic003G230600--Sobic007G145400 Sobic008G092800 Sobic008G092800 Sobic003G230600--Sobic008G092800 Sobic003G143800 Sobic003G143800 Sobic003G230600--Sobic003G143800 Sobic002G363800 Sobic002G363800 Sobic003G230600--Sobic002G363800 Sobic003G230600--Sobic001G097500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.