Gene annotation
Transcriptome id Sobic.004G094700.3,Sobic.004G094700.4,Sobic.004G094700.2
Synonym Sb04g007800
Functional annotation ATP synthase, putative, expressed
UniProt A0A194YNQ1
Pfam PF02874 PF00306 PF00006
Panther DB PTHR15184 PTHR15184:SF52
NCBI CDD -
KEGG Orthology K02147; ATPeV1B, V-type H+-transporting ATPase subunit B
Gene Ontology GO:0005524; ATP binding


Orthologs (automatic annotation)
TAIR AT4G38510 : ATPase, V1 complex, subunit B protein
RAP-DB (Rice) LOC_Os06g37180.1 : ATP synthase, putative, expressed
MaizeGDB (Corn) Zm00025a051113 , Zm00025a042299
Brachypodium PNT72697 , KQK17918 , KQJ94065 , KQJ94066 , KQK09436
Barley HORVU6Hr1G039890.8 , HORVU6Hr1G039890.1 , HORVU6Hr1G039890.7 , HORVU6Hr1G039890.6 , HORVU6Hr1G039890.5 , HORVU3Hr1G067040.5 , HORVU7Hr1G087190.2 , HORVU7Hr1G087190.3 , HORVU7Hr1G087190.1 , HORVU7Hr1G087190.4 , HORVU7Hr1G087190.5 , HORVU3Hr1G067040.2 , HORVU3Hr1G067040.1 , HORVU6Hr1G039890.3 , HORVU6Hr1G039890.2 , HORVU6Hr1G039890.4
Wheat TraesCS7B02G265500 , TraesCS7B02G265500 , TraesCS6B02G218100 , TraesCS3A02G250500 , TraesCS3B02G280000 , TraesCS3B02G280000 , TraesCS6A02G186300 , TraesCS7D02G361000 , TraesCS3D02G250900 , TraesCS7A02G362000 , TraesCS6D02G173400
Populus -


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cDNA sequences
Sobic.004G094700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G435400 vacuolar ATP synthase 98 kDa subunit, putative, expressed K02154: ATPeV0A, V-type H+-transporting ATPase subunit a
2 Sobic.001G116500 phosphoglucomutase, putative, expressed K01835: phosphoglucomutase
3 Sobic.005G144201 - -
4 Sobic.005G018800 expressed protein -
5 Sobic.006G039400 cation efflux family protein, putative, expressed K14696: SLC30A9, solute carrier family 30 (zinc transporter), member 9
6 Sobic.001G537100 dehydrogenase-phosphopantetheinyltransferase, putative, expressed K06133: LYS5, 4'-phosphopantetheinyl transferase
7 Sobic.002G070600 coatomer subunit gamma-2, putative, expressed K17267: coatomer subunit gamma
8 Sobic.010G192600 tubulin binding cofactor C, putative, expressed K16810: TBCC domain-containing protein 1
9 Sobic.008G085700 exocyst complex component 5, putative, expressed -
10 Sobic.001G356100 GPI-anchored wall transfer protein 1, putative, expressed K05283: glucosaminylphosphatidylinositol acyltransferase
11 Sobic.003G193500 CK1_CaseinKinase_1.2 - CK1 includes the casein kinase 1 kinases, expressed K02218: CSNK1, casein kinase 1
12 Sobic.008G037700 pentatricopeptide containing protein, putative, expressed -
13 Sobic.001G399700 exonuclease, putative, expressed -
14 Sobic.004G078700 tubulin binding cofactor C, putative, expressed K16810: TBCC domain-containing protein 1
15 Sobic.008G019532 - -
16 Sobic.005G017200 cytidylyltransferase domain containing protein, expressed K00967: ethanolamine-phosphate cytidylyltransferase
17 Sobic.005G022100 transporter-related, putative, expressed K15285: solute carrier family 35, member E3
18 Sobic.010G133400 pantothenate kinase 4, putative, expressed -
19 Sobic.003G182300 zinc finger family protein, putative, expressed K16284: E3 ubiquitin-protein ligase SIS3
20 Sobic.003G200800 vacuolar ATP synthase subunit d, putative, expressed K02146: ATPeV0D, V-type H+-transporting ATPase subunit d


Gene co-expression network
sample Sobic004G094700 Sobic004G094700 Sobic001G435400 Sobic001G435400 Sobic004G094700--Sobic001G435400 Sobic001G116500 Sobic001G116500 Sobic004G094700--Sobic001G116500 Sobic005G144201 Sobic005G144201 Sobic004G094700--Sobic005G144201 Sobic005G018800 Sobic005G018800 Sobic004G094700--Sobic005G018800 Sobic006G039400 Sobic006G039400 Sobic004G094700--Sobic006G039400 Sobic001G537100 Sobic001G537100 Sobic004G094700--Sobic001G537100 Sobic002G070600 Sobic002G070600 Sobic004G094700--Sobic002G070600 Sobic010G192600 Sobic010G192600 Sobic004G094700--Sobic010G192600 Sobic008G085700 Sobic008G085700 Sobic004G094700--Sobic008G085700 Sobic007G162100 Sobic007G162100 Sobic001G435400--Sobic007G162100 Sobic006G127600 Sobic006G127600 Sobic001G435400--Sobic006G127600 Sobic001G435400--Sobic004G094700 Sobic001G283600 Sobic001G283600 Sobic001G435400--Sobic001G283600 Sobic001G435400--Sobic006G039400 Sobic008G033500 Sobic008G033500 Sobic001G435400--Sobic008G033500 Sobic004G060100 Sobic004G060100 Sobic001G435400--Sobic004G060100 Sobic008G021200 Sobic008G021200 Sobic001G435400--Sobic008G021200 Sobic001G435400--Sobic005G018800 Sobic001G116500--Sobic004G094700 Sobic001G116500--Sobic001G537100 Sobic005G111700 Sobic005G111700 Sobic001G116500--Sobic005G111700 Sobic001G116500--Sobic006G039400 Sobic001G178100 Sobic001G178100 Sobic001G116500--Sobic001G178100 Sobic003G279200 Sobic003G279200 Sobic001G116500--Sobic003G279200 Sobic004G018000 Sobic004G018000 Sobic001G116500--Sobic004G018000 Sobic001G116500--Sobic001G435400 Sobic001G462200 Sobic001G462200 Sobic001G116500--Sobic001G462200 Sobic005G144201--Sobic008G085700 Sobic001G358500 Sobic001G358500 Sobic005G144201--Sobic001G358500 Sobic001G237600 Sobic001G237600 Sobic005G144201--Sobic001G237600 Sobic005G144201--Sobic004G094700 Sobic002G199400 Sobic002G199400 Sobic005G144201--Sobic002G199400 Sobic003G132000 Sobic003G132000 Sobic005G144201--Sobic003G132000 Sobic005G115500 Sobic005G115500 Sobic005G144201--Sobic005G115500 Sobic003G363700 Sobic003G363700 Sobic005G144201--Sobic003G363700 Sobic009G089700 Sobic009G089700 Sobic005G144201--Sobic009G089700 Sobic003G200800 Sobic003G200800 Sobic005G018800--Sobic003G200800 Sobic005G018800--Sobic008G021200 Sobic005G018800--Sobic004G060100 Sobic007G161200 Sobic007G161200 Sobic005G018800--Sobic007G161200 Sobic009G256000 Sobic009G256000 Sobic005G018800--Sobic009G256000 Sobic001G115700 Sobic001G115700 Sobic005G018800--Sobic001G115700 Sobic004G283600 Sobic004G283600 Sobic005G018800--Sobic004G283600 Sobic001G304000 Sobic001G304000 Sobic005G018800--Sobic001G304000 Sobic005G004100 Sobic005G004100 Sobic005G018800--Sobic005G004100 Sobic006G093300 Sobic006G093300 Sobic006G039400--Sobic006G093300 Sobic001G405600 Sobic001G405600 Sobic006G039400--Sobic001G405600 Sobic003G296900 Sobic003G296900 Sobic006G039400--Sobic003G296900 Sobic006G039400--Sobic001G237600 Sobic003G182300 Sobic003G182300 Sobic006G039400--Sobic003G182300 Sobic010G230600 Sobic010G230600 Sobic006G039400--Sobic010G230600 Sobic006G039400--Sobic007G162100 Sobic007G087000 Sobic007G087000 Sobic006G039400--Sobic007G087000 Sobic006G039400--Sobic001G283600 Sobic003G202100 Sobic003G202100 Sobic001G537100--Sobic003G202100 Sobic008G171400 Sobic008G171400 Sobic001G537100--Sobic008G171400 Sobic001G537100--Sobic001G116500 Sobic001G537100--Sobic006G039400 Sobic001G537100--Sobic005G018800 Sobic009G260700 Sobic009G260700 Sobic001G537100--Sobic009G260700 Sobic001G537100--Sobic004G094700 Sobic001G537100--Sobic010G192600 Sobic007G118500 Sobic007G118500 Sobic001G537100--Sobic007G118500 Sobic008G072200 Sobic008G072200 Sobic002G070600--Sobic008G072200 Sobic001G117800 Sobic001G117800 Sobic002G070600--Sobic001G117800 Sobic001G161700 Sobic001G161700 Sobic002G070600--Sobic001G161700 Sobic002G070600--Sobic008G085700 Sobic004G336300 Sobic004G336300 Sobic002G070600--Sobic004G336300 Sobic003G029600 Sobic003G029600 Sobic002G070600--Sobic003G029600 Sobic006G021700 Sobic006G021700 Sobic002G070600--Sobic006G021700 Sobic009G118900 Sobic009G118900 Sobic002G070600--Sobic009G118900 Sobic010G178600 Sobic010G178600 Sobic002G070600--Sobic010G178600 Sobic001G097900 Sobic001G097900 Sobic010G192600--Sobic001G097900 Sobic001G474400 Sobic001G474400 Sobic010G192600--Sobic001G474400 Sobic010G192600--Sobic001G358500 Sobic010G192600--Sobic007G118500 Sobic010G192600--Sobic008G085700 Sobic005G110499 Sobic005G110499 Sobic010G192600--Sobic005G110499 Sobic002G364900 Sobic002G364900 Sobic010G192600--Sobic002G364900 Sobic010G192600--Sobic001G115700 Sobic003G304400 Sobic003G304400 Sobic010G192600--Sobic003G304400 Sobic002G020700 Sobic002G020700 Sobic008G085700--Sobic002G020700 Sobic001G449900 Sobic001G449900 Sobic008G085700--Sobic001G449900 Sobic008G085700--Sobic002G070600 Sobic010G020400 Sobic010G020400 Sobic008G085700--Sobic010G020400 Sobic008G055900 Sobic008G055900 Sobic008G085700--Sobic008G055900 Sobic008G085700--Sobic005G110499 Sobic001G049400 Sobic001G049400 Sobic008G085700--Sobic001G049400 Sobic008G085700--Sobic001G161700 Sobic008G085700--Sobic010G192600
Octagon: transcription factors


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