Gene annotation
Transcriptome id Sobic.009G179600.2
Synonym
Functional annotation expressed protein
UniProt A0A1Z5R379
Pfam -
Panther DB PTHR15157 PTHR15157:SF14
NCBI CDD KOG2896; UV radiation resistance associated protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G32760 : -
RAP-DB (Rice) LOC_Os05g41160.1 : expressed protein
MaizeGDB (Corn) Zm00025a044069
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.009G179600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G216500 expressed protein -
2 Sobic.006G263100 expressed protein -
3 Sobic.003G033000 DIRP family protein, putative, expressed -
4 Sobic.004G039300 phosphatidate cytidylyltransferase family protein, putative, expressed K00902: dolichol kinase
5 Sobic.006G217300 NAD dependent epimerase/dehydratase family domain containing protein, expressed K12448: UXE, UDP-arabinose 4-epimerase
6 Sobic.001G122500 SNARE associated Golgi protein, putative, expressed -
7 Sobic.004G353600 sucrose transporters(PubMedID : 23805151)@Sucrose transporter genes(PubMedID : 24456189)@Sugar transporter(PubMedID : 27330561)@transporter, major facilitator family, putative, expressed K15378: solute carrier family 45, member 1/2/4
8 Sobic.004G031600 cyclin-T1-1, putative, expressed K15188: cyclin T
9 Sobic.002G395600 bZIP transcription factor domain containing protein, expressed -
10 Sobic.001G284400 jmjC domain containing protein, expressed -
11 Sobic.009G169400 expressed protein -
12 Sobic.001G311100 ubiquitin family protein, putative, expressed K04523: UBQLN, ubiquilin
13 Sobic.004G162200 heparan-alpha-glucosaminide N-acetyltransferase, putative, expressed -
14 Sobic.001G214200 lysM domain containing protein, putative, expressed -
15 Sobic.003G061900 zinc finger, C3HC4 type domain containing protein, expressed K19041: E3 ubiquitin-protein ligase RNF38/44
16 Sobic.001G409900 transporter, putative, expressed -
17 Sobic.003G374700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Sad1 / UNC-like C-terminal domain containing protein, putative, expressed -
18 Sobic.008G140400 diacylglycerol kinase 1, putative, expressed K00901: dgkA, diacylglycerol kinase (ATP)
19 Sobic.003G289900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ENTH domain containing protein, expressed K12471: epsin
20 Sobic.001G358300 SNARE associated Golgi protein, putative, expressed -


Gene co-expression network
sample Sobic009G179600 Sobic009G179600 Sobic007G216500 Sobic007G216500 Sobic009G179600--Sobic007G216500 Sobic006G263100 Sobic006G263100 Sobic009G179600--Sobic006G263100 Sobic003G033000 Sobic003G033000 Sobic009G179600--Sobic003G033000 Sobic004G039300 Sobic004G039300 Sobic009G179600--Sobic004G039300 Sobic006G217300 Sobic006G217300 Sobic009G179600--Sobic006G217300 Sobic001G122500 Sobic001G122500 Sobic009G179600--Sobic001G122500 Sobic004G353600 Sobic004G353600 Sobic009G179600--Sobic004G353600 Sobic004G031600 Sobic004G031600 Sobic009G179600--Sobic004G031600 Sobic002G395600 Sobic002G395600 Sobic009G179600--Sobic002G395600 Sobic007G216500--Sobic009G179600 Sobic007G216500--Sobic002G395600 Sobic008G058700 Sobic008G058700 Sobic007G216500--Sobic008G058700 Sobic010G030900 Sobic010G030900 Sobic007G216500--Sobic010G030900 Sobic003G342600 Sobic003G342600 Sobic007G216500--Sobic003G342600 Sobic010G101400 Sobic010G101400 Sobic007G216500--Sobic010G101400 Sobic002G270700 Sobic002G270700 Sobic007G216500--Sobic002G270700 Sobic001G311100 Sobic001G311100 Sobic007G216500--Sobic001G311100 Sobic009G184400 Sobic009G184400 Sobic007G216500--Sobic009G184400 Sobic004G280800 Sobic004G280800 Sobic006G263100--Sobic004G280800 Sobic010G246000 Sobic010G246000 Sobic006G263100--Sobic010G246000 Sobic001G290400 Sobic001G290400 Sobic006G263100--Sobic001G290400 Sobic002G379400 Sobic002G379400 Sobic006G263100--Sobic002G379400 Sobic002G330300 Sobic002G330300 Sobic006G263100--Sobic002G330300 Sobic001G147200 Sobic001G147200 Sobic006G263100--Sobic001G147200 Sobic002G294700 Sobic002G294700 Sobic006G263100--Sobic002G294700 Sobic010G228000 Sobic010G228000 Sobic006G263100--Sobic010G228000 Sobic001G409900 Sobic001G409900 Sobic006G263100--Sobic001G409900 Sobic003G033000--Sobic004G039300 Sobic008G140400 Sobic008G140400 Sobic003G033000--Sobic008G140400 Sobic004G101500 Sobic004G101500 Sobic003G033000--Sobic004G101500 Sobic003G033000--Sobic009G179600 Sobic003G346500 Sobic003G346500 Sobic003G033000--Sobic003G346500 Sobic002G419000 Sobic002G419000 Sobic003G033000--Sobic002G419000 Sobic003G289900 Sobic003G289900 Sobic003G033000--Sobic003G289900 Sobic006G222500 Sobic006G222500 Sobic003G033000--Sobic006G222500 Sobic007G117800 Sobic007G117800 Sobic003G033000--Sobic007G117800 Sobic001G085900 Sobic001G085900 Sobic004G039300--Sobic001G085900 Sobic001G313500 Sobic001G313500 Sobic004G039300--Sobic001G313500 Sobic004G039300--Sobic007G117800 Sobic010G026700 Sobic010G026700 Sobic004G039300--Sobic010G026700 Sobic004G039300--Sobic003G033000 Sobic003G121600 Sobic003G121600 Sobic004G039300--Sobic003G121600 Sobic004G039300--Sobic001G122500 Sobic004G039300--Sobic001G311100 Sobic002G261900 Sobic002G261900 Sobic004G039300--Sobic002G261900 Sobic006G217300--Sobic001G122500 Sobic006G207900 Sobic006G207900 Sobic006G217300--Sobic006G207900 Sobic007G026800 Sobic007G026800 Sobic006G217300--Sobic007G026800 Sobic003G043800 Sobic003G043800 Sobic006G217300--Sobic003G043800 Sobic010G064600 Sobic010G064600 Sobic006G217300--Sobic010G064600 Sobic001G312500 Sobic001G312500 Sobic006G217300--Sobic001G312500 Sobic002G431000 Sobic002G431000 Sobic006G217300--Sobic002G431000 Sobic010G184300 Sobic010G184300 Sobic006G217300--Sobic010G184300 Sobic004G228800 Sobic004G228800 Sobic006G217300--Sobic004G228800 Sobic001G122500--Sobic006G217300 Sobic001G214200 Sobic001G214200 Sobic001G122500--Sobic001G214200 Sobic004G350300 Sobic004G350300 Sobic001G122500--Sobic004G350300 Sobic001G122500--Sobic006G263100 Sobic010G188100 Sobic010G188100 Sobic001G122500--Sobic010G188100 Sobic003G002400 Sobic003G002400 Sobic001G122500--Sobic003G002400 Sobic001G122500--Sobic010G026700 Sobic001G122500--Sobic001G409900 Sobic002G214900 Sobic002G214900 Sobic001G122500--Sobic002G214900 Sobic003G272400 Sobic003G272400 Sobic004G353600--Sobic003G272400 Sobic002G306000 Sobic002G306000 Sobic004G353600--Sobic002G306000 Sobic006G078300 Sobic006G078300 Sobic004G353600--Sobic006G078300 Sobic003G087100 Sobic003G087100 Sobic004G353600--Sobic003G087100 Sobic003G378000 Sobic003G378000 Sobic004G353600--Sobic003G378000 Sobic001G157400 Sobic001G157400 Sobic004G353600--Sobic001G157400 Sobic003G332000 Sobic003G332000 Sobic004G353600--Sobic003G332000 Sobic001G075800 Sobic001G075800 Sobic004G353600--Sobic001G075800 Sobic006G203000 Sobic006G203000 Sobic004G353600--Sobic006G203000 Sobic001G516100 Sobic001G516100 Sobic004G031600--Sobic001G516100 Sobic010G052800 Sobic010G052800 Sobic004G031600--Sobic010G052800 Sobic004G031600--Sobic002G330300 Sobic009G231200 Sobic009G231200 Sobic004G031600--Sobic009G231200 Sobic003G407200 Sobic003G407200 Sobic004G031600--Sobic003G407200 Sobic001G031600 Sobic001G031600 Sobic004G031600--Sobic001G031600 Sobic003G119800 Sobic003G119800 Sobic004G031600--Sobic003G119800 Sobic007G169200 Sobic007G169200 Sobic004G031600--Sobic007G169200 Sobic001G463000 Sobic001G463000 Sobic004G031600--Sobic001G463000 Sobic002G395600--Sobic006G263100 Sobic003G392200 Sobic003G392200 Sobic002G395600--Sobic003G392200 Sobic002G395600--Sobic001G214200 Sobic002G395600--Sobic002G330300 Sobic007G178200 Sobic007G178200 Sobic002G395600--Sobic007G178200 Sobic010G017000 Sobic010G017000 Sobic002G395600--Sobic010G017000 Sobic004G026200 Sobic004G026200 Sobic002G395600--Sobic004G026200 Sobic002G395600--Sobic004G280800 Sobic001G283500 Sobic001G283500 Sobic002G395600--Sobic001G283500
Octagon: transcription factors


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