Gene annotation
Transcriptome id Sobic.003G374700.1
Synonym Sb03g041510
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
Sad1 / UNC-like C-terminal domain containing protein, putative, expressed
UniProt C5XRC9
Pfam PF07738
Panther DB PTHR12953 PTHR12953:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G71360 : Galactose-binding protein
RAP-DB (Rice) LOC_Os01g65520.1 : Sad1 / UNC-like C-terminal domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a039524 , Zm00025a026604
Brachypodium KQK10856 , KQK10855
Barley HORVU3Hr1G081880.2 , HORVU3Hr1G081880.3 , HORVU3Hr1G081880.1 , HORVU3Hr1G081880.6 , HORVU3Hr1G081880.4 , HORVU3Hr1G081880.5
Wheat TraesCS3B02G418900 , TraesCS3A02G389900 , TraesCS3A02G389900 , TraesCS3D02G379800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G064800 heparan-alpha-glucosaminide N-acetyltransferase, putative, expressed -
2 Sobic.003G332000 expressed protein -
3 Sobic.004G353600 sucrose transporters(PubMedID : 23805151)@Sucrose transporter genes(PubMedID : 24456189)@Sugar transporter(PubMedID : 27330561)@transporter, major facilitator family, putative, expressed K15378: solute carrier family 45, member 1/2/4
4 Sobic.004G236550 - -
5 Sobic.008G141800 Probable galacturonosyltransferase 13(PubMedID : 26186930)@glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
6 Sobic.009G169400 expressed protein -
7 Sobic.004G162200 heparan-alpha-glucosaminide N-acetyltransferase, putative, expressed -
8 Sobic.002G355200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@BTBN16 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed -
9 Sobic.001G409900 transporter, putative, expressed -
10 Sobic.006G207900 DNA binding protein, putative, expressed -
11 Sobic.009G179600 expressed protein -
12 Sobic.006G087900 TKL_IRAK_CR4L.3 - The CR4L subfamily has homology with Crinkly4, expressed -
13 Sobic.006G217300 NAD dependent epimerase/dehydratase family domain containing protein, expressed K12448: UXE, UDP-arabinose 4-epimerase
14 Sobic.003G392200 CXE carboxylesterase, putative, expressed -
15 Sobic.009G079300 receptor protein kinase-like, putative, expressed -
16 Sobic.001G051800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsFBDUF18 - F-box and DUF domain containing protein, expressed -
17 Sobic.003G272400 DUF292 domain containing protein, expressed -
18 Sobic.003G095400 glycosyltransferase protein, putative, expressed -
19 Sobic.005G195600 adenylyl-sulfate kinase, putative, expressed K00860: adenylylsulfate kinase
20 Sobic.009G118600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@eukaryotic peptide chain release factor subunit 1-1, putative, expressed K03265: ETF1, peptide chain release factor subunit 1


Gene co-expression network
sample Sobic003G374700 Sobic003G374700 Sobic006G064800 Sobic006G064800 Sobic003G374700--Sobic006G064800 Sobic003G332000 Sobic003G332000 Sobic003G374700--Sobic003G332000 Sobic004G353600 Sobic004G353600 Sobic003G374700--Sobic004G353600 Sobic004G236550 Sobic004G236550 Sobic003G374700--Sobic004G236550 Sobic008G141800 Sobic008G141800 Sobic003G374700--Sobic008G141800 Sobic009G169400 Sobic009G169400 Sobic003G374700--Sobic009G169400 Sobic004G162200 Sobic004G162200 Sobic003G374700--Sobic004G162200 Sobic002G355200 Sobic002G355200 Sobic003G374700--Sobic002G355200 Sobic001G409900 Sobic001G409900 Sobic003G374700--Sobic001G409900 Sobic006G087900 Sobic006G087900 Sobic006G064800--Sobic006G087900 Sobic005G195600 Sobic005G195600 Sobic006G064800--Sobic005G195600 Sobic006G064800--Sobic003G374700 Sobic002G362900 Sobic002G362900 Sobic006G064800--Sobic002G362900 Sobic010G161450 Sobic010G161450 Sobic006G064800--Sobic010G161450 Sobic001G012800 Sobic001G012800 Sobic006G064800--Sobic001G012800 Sobic001G051800 Sobic001G051800 Sobic006G064800--Sobic001G051800 Sobic010G236500 Sobic010G236500 Sobic006G064800--Sobic010G236500 Sobic009G073000 Sobic009G073000 Sobic006G064800--Sobic009G073000 Sobic003G332000--Sobic004G236550 Sobic003G332000--Sobic004G353600 Sobic003G332000--Sobic003G374700 Sobic009G118600 Sobic009G118600 Sobic003G332000--Sobic009G118600 Sobic001G005700 Sobic001G005700 Sobic003G332000--Sobic001G005700 Sobic009G136100 Sobic009G136100 Sobic003G332000--Sobic009G136100 Sobic002G225300 Sobic002G225300 Sobic003G332000--Sobic002G225300 Sobic009G079300 Sobic009G079300 Sobic003G332000--Sobic009G079300 Sobic007G131700 Sobic007G131700 Sobic003G332000--Sobic007G131700 Sobic003G272400 Sobic003G272400 Sobic004G353600--Sobic003G272400 Sobic002G306000 Sobic002G306000 Sobic004G353600--Sobic002G306000 Sobic006G078300 Sobic006G078300 Sobic004G353600--Sobic006G078300 Sobic003G087100 Sobic003G087100 Sobic004G353600--Sobic003G087100 Sobic003G378000 Sobic003G378000 Sobic004G353600--Sobic003G378000 Sobic001G157400 Sobic001G157400 Sobic004G353600--Sobic001G157400 Sobic004G353600--Sobic003G332000 Sobic001G075800 Sobic001G075800 Sobic004G353600--Sobic001G075800 Sobic006G203000 Sobic006G203000 Sobic004G353600--Sobic006G203000 Sobic004G236550--Sobic009G079300 Sobic004G236550--Sobic002G355200 Sobic004G236550--Sobic009G136100 Sobic004G236550--Sobic003G332000 Sobic006G086100 Sobic006G086100 Sobic004G236550--Sobic006G086100 Sobic005G016800 Sobic005G016800 Sobic004G236550--Sobic005G016800 Sobic004G236550--Sobic009G118600 Sobic006G115300 Sobic006G115300 Sobic004G236550--Sobic006G115300 Sobic004G236550--Sobic002G225300 Sobic004G207900 Sobic004G207900 Sobic008G141800--Sobic004G207900 Sobic006G232000 Sobic006G232000 Sobic008G141800--Sobic006G232000 Sobic006G217300 Sobic006G217300 Sobic008G141800--Sobic006G217300 Sobic007G205900 Sobic007G205900 Sobic008G141800--Sobic007G205900 Sobic008G141800--Sobic003G374700 Sobic003G126300 Sobic003G126300 Sobic008G141800--Sobic003G126300 Sobic003G043800 Sobic003G043800 Sobic008G141800--Sobic003G043800 Sobic004G236200 Sobic004G236200 Sobic008G141800--Sobic004G236200 Sobic004G132300 Sobic004G132300 Sobic008G141800--Sobic004G132300 Sobic006G207900 Sobic006G207900 Sobic009G169400--Sobic006G207900 Sobic007G169200 Sobic007G169200 Sobic009G169400--Sobic007G169200 Sobic009G169400--Sobic004G162200 Sobic004G278000 Sobic004G278000 Sobic009G169400--Sobic004G278000 Sobic002G197600 Sobic002G197600 Sobic009G169400--Sobic002G197600 Sobic001G122500 Sobic001G122500 Sobic009G169400--Sobic001G122500 Sobic008G059000 Sobic008G059000 Sobic009G169400--Sobic008G059000 Sobic004G176900 Sobic004G176900 Sobic009G169400--Sobic004G176900 Sobic004G244100 Sobic004G244100 Sobic009G169400--Sobic004G244100 Sobic004G162200--Sobic001G075800 Sobic006G263100 Sobic006G263100 Sobic004G162200--Sobic006G263100 Sobic004G162200--Sobic009G169400 Sobic004G300300 Sobic004G300300 Sobic004G162200--Sobic004G300300 Sobic009G167000 Sobic009G167000 Sobic004G162200--Sobic009G167000 Sobic009G030600 Sobic009G030600 Sobic004G162200--Sobic009G030600 Sobic004G268700 Sobic004G268700 Sobic004G162200--Sobic004G268700 Sobic001G050800 Sobic001G050800 Sobic004G162200--Sobic001G050800 Sobic002G188700 Sobic002G188700 Sobic004G162200--Sobic002G188700 Sobic001G151800 Sobic001G151800 Sobic002G355200--Sobic001G151800 Sobic008G144500 Sobic008G144500 Sobic002G355200--Sobic008G144500 Sobic009G236200 Sobic009G236200 Sobic002G355200--Sobic009G236200 Sobic007G125900 Sobic007G125900 Sobic002G355200--Sobic007G125900 Sobic002G355200--Sobic004G236550 Sobic002G355200--Sobic005G016800 Sobic009G236300 Sobic009G236300 Sobic002G355200--Sobic009G236300 Sobic010G016400 Sobic010G016400 Sobic002G355200--Sobic010G016400 Sobic006G119200 Sobic006G119200 Sobic002G355200--Sobic006G119200 Sobic002G214900 Sobic002G214900 Sobic001G409900--Sobic002G214900 Sobic001G409900--Sobic006G263100 Sobic001G173300 Sobic001G173300 Sobic001G409900--Sobic001G173300 Sobic001G409900--Sobic004G278000 Sobic009G208800 Sobic009G208800 Sobic001G409900--Sobic009G208800 Sobic001G409900--Sobic002G362900 Sobic007G188100 Sobic007G188100 Sobic001G409900--Sobic007G188100 Sobic001G409900--Sobic001G122500 Sobic003G023500 Sobic003G023500 Sobic001G409900--Sobic003G023500
Octagon: transcription factors


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