Gene annotation
Transcriptome id Sobic.008G141800.1
Synonym GAUT13, Sb08g019260
Functional annotation Probable galacturonosyltransferase 13 (PubMedID : 26186930)
glycosyl transferase 8 domain containing protein, putative, expressed
UniProt C5YQE9
Pfam PF01501
Panther DB PTHR32116 PTHR32116:SF32
NCBI CDD -
KEGG Orthology K13648; alpha-1,4-galacturonosyltransferase
Gene Ontology GO:0016757; transferase activity, transferring glycosyl groups


Orthologs (automatic annotation)
TAIR AT3G01040 : galacturonosyltransferase 13
RAP-DB (Rice) LOC_Os12g38930.1 : glycosyl transferase 8 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a025379 , Zm00025a004342
Brachypodium KQJ86153
Barley HORVU5Hr1G019640.4 , HORVU5Hr1G019640.3 , HORVU5Hr1G019640.2 , HORVU5Hr1G019640.1
Wheat TraesCS5A02G073900 , TraesCS5A02G073900 , TraesCS5B02G080300 , TraesCS5B02G080300 , TraesCS5B02G080300 , TraesCS5D02G087600 , TraesCS5D02G087600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G207900 nucleotide-sugar transporter family protein, putative, expressed -
2 Sobic.006G232000 glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
3 Sobic.006G217300 NAD dependent epimerase/dehydratase family domain containing protein, expressed K12448: UXE, UDP-arabinose 4-epimerase
4 Sobic.007G205900 uvrB/uvrC motif family protein, expressed -
5 Sobic.003G374700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Sad1 / UNC-like C-terminal domain containing protein, putative, expressed -
6 Sobic.003G126300 OsRhmbd2 - Putative Rhomboid homologue, expressed -
7 Sobic.003G043800 BT1 family protein, putative, expressed -
8 Sobic.004G236200 SEC6, putative, expressed K06110: EXOC3, exocyst complex component 3
9 Sobic.004G132300 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
10 Sobic.003G270600 adaptor complexes medium subunit family domain containing protein, expressed K12393: AP-1 complex subunit mu
11 Sobic.002G294200 transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4
12 Sobic.008G118400 kelch repeat protein, putative, expressed -
13 Sobic.009G235600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transporter family protein, putative, expressed K08145: SLC2A8, MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8
14 Sobic.001G338400 glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
15 Sobic.001G409900 transporter, putative, expressed -
16 Sobic.001G237500 transporter family protein, putative, expressed -
17 Sobic.006G207900 DNA binding protein, putative, expressed -
18 Sobic.010G064600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@LIM domain-containing protein, putative, expressed -
19 Sobic.009G079300 receptor protein kinase-like, putative, expressed -
20 Sobic.001G122500 SNARE associated Golgi protein, putative, expressed -


Gene co-expression network
sample Sobic008G141800 Sobic008G141800 Sobic004G207900 Sobic004G207900 Sobic008G141800--Sobic004G207900 Sobic006G232000 Sobic006G232000 Sobic008G141800--Sobic006G232000 Sobic006G217300 Sobic006G217300 Sobic008G141800--Sobic006G217300 Sobic007G205900 Sobic007G205900 Sobic008G141800--Sobic007G205900 Sobic003G374700 Sobic003G374700 Sobic008G141800--Sobic003G374700 Sobic003G126300 Sobic003G126300 Sobic008G141800--Sobic003G126300 Sobic003G043800 Sobic003G043800 Sobic008G141800--Sobic003G043800 Sobic004G236200 Sobic004G236200 Sobic008G141800--Sobic004G236200 Sobic004G132300 Sobic004G132300 Sobic008G141800--Sobic004G132300 Sobic001G161700 Sobic001G161700 Sobic004G207900--Sobic001G161700 Sobic009G077600 Sobic009G077600 Sobic004G207900--Sobic009G077600 Sobic004G100200 Sobic004G100200 Sobic004G207900--Sobic004G100200 Sobic001G023100 Sobic001G023100 Sobic004G207900--Sobic001G023100 Sobic003G346400 Sobic003G346400 Sobic004G207900--Sobic003G346400 Sobic004G025300 Sobic004G025300 Sobic004G207900--Sobic004G025300 Sobic002G141700 Sobic002G141700 Sobic004G207900--Sobic002G141700 Sobic008G129600 Sobic008G129600 Sobic004G207900--Sobic008G129600 Sobic002G294100 Sobic002G294100 Sobic004G207900--Sobic002G294100 Sobic009G238800 Sobic009G238800 Sobic006G232000--Sobic009G238800 Sobic003G009300 Sobic003G009300 Sobic006G232000--Sobic003G009300 Sobic006G148200 Sobic006G148200 Sobic006G232000--Sobic006G148200 Sobic001G077900 Sobic001G077900 Sobic006G232000--Sobic001G077900 Sobic003G270600 Sobic003G270600 Sobic006G232000--Sobic003G270600 Sobic004G010900 Sobic004G010900 Sobic006G232000--Sobic004G010900 Sobic010G261600 Sobic010G261600 Sobic006G232000--Sobic010G261600 Sobic010G064600 Sobic010G064600 Sobic006G232000--Sobic010G064600 Sobic002G294200 Sobic002G294200 Sobic006G232000--Sobic002G294200 Sobic001G122500 Sobic001G122500 Sobic006G217300--Sobic001G122500 Sobic006G207900 Sobic006G207900 Sobic006G217300--Sobic006G207900 Sobic007G026800 Sobic007G026800 Sobic006G217300--Sobic007G026800 Sobic006G217300--Sobic003G043800 Sobic006G217300--Sobic010G064600 Sobic001G312500 Sobic001G312500 Sobic006G217300--Sobic001G312500 Sobic002G431000 Sobic002G431000 Sobic006G217300--Sobic002G431000 Sobic010G184300 Sobic010G184300 Sobic006G217300--Sobic010G184300 Sobic004G228800 Sobic004G228800 Sobic006G217300--Sobic004G228800 Sobic007G205900--Sobic010G261600 Sobic007G205900--Sobic004G236200 Sobic007G205900--Sobic003G270600 Sobic003G195500 Sobic003G195500 Sobic007G205900--Sobic003G195500 Sobic007G205900--Sobic004G228800 Sobic004G002400 Sobic004G002400 Sobic007G205900--Sobic004G002400 Sobic005G059600 Sobic005G059600 Sobic007G205900--Sobic005G059600 Sobic006G271200 Sobic006G271200 Sobic007G205900--Sobic006G271200 Sobic006G034000 Sobic006G034000 Sobic007G205900--Sobic006G034000 Sobic006G064800 Sobic006G064800 Sobic003G374700--Sobic006G064800 Sobic003G332000 Sobic003G332000 Sobic003G374700--Sobic003G332000 Sobic004G353600 Sobic004G353600 Sobic003G374700--Sobic004G353600 Sobic004G236550 Sobic004G236550 Sobic003G374700--Sobic004G236550 Sobic003G374700--Sobic008G141800 Sobic009G169400 Sobic009G169400 Sobic003G374700--Sobic009G169400 Sobic004G162200 Sobic004G162200 Sobic003G374700--Sobic004G162200 Sobic002G355200 Sobic002G355200 Sobic003G374700--Sobic002G355200 Sobic001G409900 Sobic001G409900 Sobic003G374700--Sobic001G409900 Sobic003G126300--Sobic004G228800 Sobic009G079300 Sobic009G079300 Sobic003G126300--Sobic009G079300 Sobic004G004200 Sobic004G004200 Sobic003G126300--Sobic004G004200 Sobic008G110600 Sobic008G110600 Sobic003G126300--Sobic008G110600 Sobic004G261600 Sobic004G261600 Sobic003G126300--Sobic004G261600 Sobic003G126300--Sobic006G034000 Sobic003G272400 Sobic003G272400 Sobic003G126300--Sobic003G272400 Sobic007G056600 Sobic007G056600 Sobic003G126300--Sobic007G056600 Sobic006G033200 Sobic006G033200 Sobic003G126300--Sobic006G033200 Sobic003G043800--Sobic006G217300 Sobic003G043800--Sobic001G122500 Sobic010G026300 Sobic010G026300 Sobic003G043800--Sobic010G026300 Sobic004G124500 Sobic004G124500 Sobic003G043800--Sobic004G124500 Sobic003G043800--Sobic004G207900 Sobic001G378200 Sobic001G378200 Sobic003G043800--Sobic001G378200 Sobic003G043800--Sobic006G207900 Sobic006G055400 Sobic006G055400 Sobic003G043800--Sobic006G055400 Sobic005G207400 Sobic005G207400 Sobic003G043800--Sobic005G207400 Sobic004G236200--Sobic003G270600 Sobic001G056800 Sobic001G056800 Sobic004G236200--Sobic001G056800 Sobic006G077300 Sobic006G077300 Sobic004G236200--Sobic006G077300 Sobic004G236200--Sobic004G228800 Sobic006G203300 Sobic006G203300 Sobic004G236200--Sobic006G203300 Sobic003G427600 Sobic003G427600 Sobic004G236200--Sobic003G427600 Sobic003G394200 Sobic003G394200 Sobic004G236200--Sobic003G394200 Sobic004G236200--Sobic007G205900 Sobic002G156000 Sobic002G156000 Sobic004G236200--Sobic002G156000 Sobic001G283200 Sobic001G283200 Sobic004G132300--Sobic001G283200 Sobic001G033500 Sobic001G033500 Sobic004G132300--Sobic001G033500 Sobic006G217700 Sobic006G217700 Sobic004G132300--Sobic006G217700 Sobic001G206900 Sobic001G206900 Sobic004G132300--Sobic001G206900 Sobic004G132300--Sobic006G148200 Sobic001G237500 Sobic001G237500 Sobic004G132300--Sobic001G237500 Sobic004G132300--Sobic002G294200 Sobic004G274400 Sobic004G274400 Sobic004G132300--Sobic004G274400 Sobic004G132300--Sobic006G034000
Octagon: transcription factors


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