Gene annotation
Transcriptome id Sobic.009G235600.2,Sobic.009G235600.1
Synonym Sb09g028810
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
transporter family protein, putative, expressed
UniProt C5YVX3
Pfam PF07690
Panther DB PTHR23500 PTHR23500:SF123
NCBI CDD KOG0254; Predicted transporter (major facilitator superfamily)
KEGG Orthology K08145; SLC2A8, MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT1G19450 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os05g49270.1 : transporter family protein, putative, expressed
MaizeGDB (Corn) Zm00025a044612 , Zm00025a044609 , Zm00025a044607 , Zm00025a044049 , Zm00025a036642 , Zm00025a036639 , Zm00025a036637
Brachypodium KQK04811 , KQK04808
Barley HORVU1Hr1G089680.4 , HORVU1Hr1G089680.2 , HORVU1Hr1G089680.3 , HORVU1Hr1G089680.1 , HORVU1Hr1G089530.12 , HORVU1Hr1G089530.10 , HORVU1Hr1G089530.11 , HORVU1Hr1G089530.4 , HORVU1Hr1G089530.6 , HORVU1Hr1G089530.7
Wheat TraesCS5A02G509600 , TraesCS1B02G435700 , TraesCS1D02G413700 , TraesCS1A02G405600 , TraesCS4B02G339800 , TraesCS1A02G405800 , TraesCS5A02G509400 , TraesCS1B02G435900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G064600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@LIM domain-containing protein, putative, expressed -
2 Sobic.001G512800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aconitate hydratase protein, putative, expressed K01681: ACO, aconitate hydratase
3 Sobic.003G377000 powdery mildew resistant protein 5, putative, expressed -
4 Sobic.006G119200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@copper methylamine oxidase precursor, putative, expressed K00276: AOC3, AOC2, primary-amine oxidase
5 Sobic.001G386400 phospholipid-transporting ATPase, putative, expressed K14802: DRS2, phospholipid-transporting ATPase
6 Sobic.010G184300 glycosyltransferase family protein, putative, expressed K00771: protein xylosyltransferase
7 Sobic.006G232000 glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
8 Sobic.006G176600 aminotransferase domain containing protein, putative, expressed K00826: E2.6.1.42, branched-chain amino acid aminotransferase
9 Sobic.001G188900 expressed protein -
10 Sobic.010G203600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
11 Sobic.010G016400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@peroxisomal biogenesis factor 11, putative, expressed -
12 Sobic.007G205900 uvrB/uvrC motif family protein, expressed -
13 Sobic.006G237900 UBA/TS-N domain containing protein, expressed -
14 Sobic.001G089800 nuclear prelamin A recognition factor, putative, expressed -
15 Sobic.008G141800 Probable galacturonosyltransferase 13(PubMedID : 26186930)@glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
16 Sobic.008G113600 glutathione synthetase, chloroplast precursor, putative, expressed K01920: glutathione synthase
17 Sobic.002G294200 transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4
18 Sobic.K043400 dnaJ homolog subfamily C member, putative, expressed K09523: DnaJ homolog subfamily C member 3
19 Sobic.002G322900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@integral membrane protein DUF6 containing protein, expressed -
20 Sobic.004G236200 SEC6, putative, expressed K06110: EXOC3, exocyst complex component 3


Gene co-expression network
sample Sobic009G235600 Sobic009G235600 Sobic010G064600 Sobic010G064600 Sobic009G235600--Sobic010G064600 Sobic001G512800 Sobic001G512800 Sobic009G235600--Sobic001G512800 Sobic003G377000 Sobic003G377000 Sobic009G235600--Sobic003G377000 Sobic006G119200 Sobic006G119200 Sobic009G235600--Sobic006G119200 Sobic001G386400 Sobic001G386400 Sobic009G235600--Sobic001G386400 Sobic010G184300 Sobic010G184300 Sobic009G235600--Sobic010G184300 Sobic006G232000 Sobic006G232000 Sobic009G235600--Sobic006G232000 Sobic006G176600 Sobic006G176600 Sobic009G235600--Sobic006G176600 Sobic001G188900 Sobic001G188900 Sobic009G235600--Sobic001G188900 Sobic003G087000 Sobic003G087000 Sobic010G064600--Sobic003G087000 Sobic008G093000 Sobic008G093000 Sobic010G064600--Sobic008G093000 Sobic010G261600 Sobic010G261600 Sobic010G064600--Sobic010G261600 Sobic004G228800 Sobic004G228800 Sobic010G064600--Sobic004G228800 Sobic010G064600--Sobic010G184300 Sobic006G281800 Sobic006G281800 Sobic010G064600--Sobic006G281800 Sobic009G072700 Sobic009G072700 Sobic010G064600--Sobic009G072700 Sobic001G089800 Sobic001G089800 Sobic010G064600--Sobic001G089800 Sobic001G003000 Sobic001G003000 Sobic010G064600--Sobic001G003000 Sobic003G138200 Sobic003G138200 Sobic001G512800--Sobic003G138200 Sobic002G322900 Sobic002G322900 Sobic001G512800--Sobic002G322900 Sobic010G206000 Sobic010G206000 Sobic001G512800--Sobic010G206000 Sobic004G246200 Sobic004G246200 Sobic001G512800--Sobic004G246200 Sobic002G409500 Sobic002G409500 Sobic001G512800--Sobic002G409500 Sobic009G029600 Sobic009G029600 Sobic001G512800--Sobic009G029600 Sobic010G248900 Sobic010G248900 Sobic001G512800--Sobic010G248900 Sobic009G054500 Sobic009G054500 Sobic001G512800--Sobic009G054500 Sobic005G079900 Sobic005G079900 Sobic001G512800--Sobic005G079900 Sobic002G265300 Sobic002G265300 Sobic003G377000--Sobic002G265300 Sobic002G431000 Sobic002G431000 Sobic003G377000--Sobic002G431000 Sobic002G139600 Sobic002G139600 Sobic003G377000--Sobic002G139600 Sobic005G177700 Sobic005G177700 Sobic003G377000--Sobic005G177700 Sobic007G026800 Sobic007G026800 Sobic003G377000--Sobic007G026800 Sobic003G377000--Sobic010G184300 Sobic004G093600 Sobic004G093600 Sobic003G377000--Sobic004G093600 Sobic004G096700 Sobic004G096700 Sobic003G377000--Sobic004G096700 SobicK043400 SobicK043400 Sobic003G377000--SobicK043400 Sobic006G119200--Sobic001G386400 Sobic001G132000 Sobic001G132000 Sobic006G119200--Sobic001G132000 Sobic010G016400 Sobic010G016400 Sobic006G119200--Sobic010G016400 Sobic009G167700 Sobic009G167700 Sobic006G119200--Sobic009G167700 Sobic002G155400 Sobic002G155400 Sobic006G119200--Sobic002G155400 Sobic009G234800 Sobic009G234800 Sobic006G119200--Sobic009G234800 Sobic006G119200--Sobic001G512800 Sobic005G231900 Sobic005G231900 Sobic006G119200--Sobic005G231900 Sobic004G347300 Sobic004G347300 Sobic006G119200--Sobic004G347300 Sobic001G386400--Sobic006G119200 Sobic001G386400--Sobic009G167700 Sobic009G000200 Sobic009G000200 Sobic001G386400--Sobic009G000200 Sobic003G316300 Sobic003G316300 Sobic001G386400--Sobic003G316300 Sobic001G386400--Sobic002G155400 Sobic010G161450 Sobic010G161450 Sobic001G386400--Sobic010G161450 Sobic004G106900 Sobic004G106900 Sobic001G386400--Sobic004G106900 Sobic002G024100 Sobic002G024100 Sobic001G386400--Sobic002G024100 Sobic004G341200 Sobic004G341200 Sobic001G386400--Sobic004G341200 Sobic010G184300--Sobic002G431000 Sobic010G184300--Sobic004G228800 Sobic010G184300--Sobic005G177700 Sobic010G184300--Sobic010G064600 Sobic004G236200 Sobic004G236200 Sobic010G184300--Sobic004G236200 Sobic003G270600 Sobic003G270600 Sobic010G184300--Sobic003G270600 Sobic010G184300--Sobic003G087000 Sobic004G241900 Sobic004G241900 Sobic010G184300--Sobic004G241900 Sobic007G056100 Sobic007G056100 Sobic010G184300--Sobic007G056100 Sobic009G238800 Sobic009G238800 Sobic006G232000--Sobic009G238800 Sobic003G009300 Sobic003G009300 Sobic006G232000--Sobic003G009300 Sobic006G148200 Sobic006G148200 Sobic006G232000--Sobic006G148200 Sobic001G077900 Sobic001G077900 Sobic006G232000--Sobic001G077900 Sobic006G232000--Sobic003G270600 Sobic004G010900 Sobic004G010900 Sobic006G232000--Sobic004G010900 Sobic006G232000--Sobic010G261600 Sobic006G232000--Sobic010G064600 Sobic002G294200 Sobic002G294200 Sobic006G232000--Sobic002G294200 Sobic006G176600--Sobic002G294200 Sobic010G193900 Sobic010G193900 Sobic006G176600--Sobic010G193900 Sobic010G002400 Sobic010G002400 Sobic006G176600--Sobic010G002400 Sobic006G176600--Sobic006G148200 Sobic001G049200 Sobic001G049200 Sobic006G176600--Sobic001G049200 Sobic006G222100 Sobic006G222100 Sobic006G176600--Sobic006G222100 Sobic004G237600 Sobic004G237600 Sobic006G176600--Sobic004G237600 Sobic007G136100 Sobic007G136100 Sobic006G176600--Sobic007G136100 Sobic003G012200 Sobic003G012200 Sobic006G176600--Sobic003G012200 Sobic003G156400 Sobic003G156400 Sobic001G188900--Sobic003G156400 Sobic004G130400 Sobic004G130400 Sobic001G188900--Sobic004G130400 Sobic003G338500 Sobic003G338500 Sobic001G188900--Sobic003G338500 Sobic007G075500 Sobic007G075500 Sobic001G188900--Sobic007G075500 Sobic001G205100 Sobic001G205100 Sobic001G188900--Sobic001G205100 Sobic003G212100 Sobic003G212100 Sobic001G188900--Sobic003G212100 Sobic002G405400 Sobic002G405400 Sobic001G188900--Sobic002G405400 Sobic009G224000 Sobic009G224000 Sobic001G188900--Sobic009G224000 Sobic001G188900--Sobic009G235600
Octagon: transcription factors


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