Gene annotation
Transcriptome id Sobic.010G203600.1
Synonym CYP71B2, Sb10g025110
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
cytochrome P450, putative, expressed
UniProt C5Z6M8
Pfam PF00067
Panther DB PTHR24298 PTHR24298:SF181
NCBI CDD KOG0156; Cytochrome P450 CYP2 subfamily
KEGG Orthology -
Gene Ontology GO:0016705; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0005506iron ion binding


Orthologs (automatic annotation)
TAIR AT1G13110 : cytochrome P450, family 71 subfamily B, polypeptide 7
RAP-DB (Rice) LOC_Os06g43420.1 : cytochrome P450, putative, expressed
MaizeGDB (Corn) Zm00025a015385 , Zm00025a051414 , Zm00025a042079
Brachypodium KQJ93721 , KQK06463 , PNT65187 , PNT65188 , KQJ91555 , PNT75355
Barley HORVU7Hr1G116160.2 , HORVU7Hr1G116160.1 , HORVU5Hr1G088540.4 , HORVU5Hr1G088540.2 , HORVU5Hr1G088540.3 , HORVU5Hr1G088540.1 , HORVU3Hr1G011820.9 , HORVU3Hr1G011820.8 , HORVU3Hr1G011820.1 , HORVU3Hr1G011820.3 , HORVU3Hr1G011820.2 , HORVU3Hr1G011820.5 , HORVU3Hr1G011820.4 , HORVU3Hr1G011820.7 , HORVU3Hr1G011820.6 , HORVU2Hr1G103970.6 , HORVU2Hr1G103970.7 , HORVU2Hr1G103970.4 , HORVU2Hr1G103970.5 , HORVU2Hr1G103970.3 , HORVU6Hr1G035800.1
Wheat TraesCS2D02G029700 , TraesCS6D02G303800 , TraesCS2D02G462600 , TraesCS6B02G203300 , TraesCS2B02G483800 , TraesCS2B02G003400 , TraesCSU02G009100 , TraesCS2B02G003200 , TraesCS4A02G496500 , TraesCS2A02G462200 , TraesCS2B02G002900 , TraesCS2D02G462400 , TraesCS4A02G498300 , TraesCS2D02G015000 , TraesCS7D02G511700
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G061300 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
2 Sobic.007G119800 ABC transporter, ATP-binding protein, putative, expressed -
3 Sobic.009G235600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transporter family protein, putative, expressed K08145: SLC2A8, MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8
4 Sobic.001G386400 phospholipid-transporting ATPase, putative, expressed K14802: DRS2, phospholipid-transporting ATPase
5 Sobic.006G176600 aminotransferase domain containing protein, putative, expressed K00826: E2.6.1.42, branched-chain amino acid aminotransferase
6 Sobic.004G173600 OsPDIL5-3 protein disulfide isomerase PDIL5-3, expressed K09580: PDIA1, protein disulfide-isomerase A1
7 Sobic.007G011700 non-lysosomal glucosylceramidase, putative, expressed K17108: non-lysosomal glucosylceramidase
8 Sobic.001G049200 AMP-binding enzyme, putative, expressed -
9 Sobic.001G456100 integral membrane protein, putative, expressed -
10 Sobic.010G193900 N-terminal asparagine amidohydrolase, putative, expressed K14662: protein N-terminal asparagine amidohydrolase
11 Sobic.002G024100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lectin-like receptor kinase, putative, expressed -
12 Sobic.004G106900 "C3 PTPC, root-inducible gene"(PubMedID : 2308851)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phosphoenolphyruvate carboxylase(PubMedID : 26904072)@phosphoenolpyruvate carboxylase, putative, expressed K01595: phosphoenolpyruvate carboxylase
13 Sobic.005G075600 rp3 protein, putative, expressed -
14 Sobic.002G114800 CDPK - calcium-dependent protein kinase 18(PubMedID : 31721651)@CAMK_CAMK_like.32 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
15 Sobic.002G294200 transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4
16 Sobic.002G422500 short-chain dehydrogenase/reductase, putative, expressed K15095: (+)-neomenthol dehydrogenase
17 Sobic.001G328000 phenazine biosynthesis protein, putative, expressed -
18 Sobic.009G000200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phospholipid-transporting ATPase, putative, expressed K01530: phospholipid-translocating ATPase
19 Sobic.003G440900 Invertase genes(PubMedID : 24456189)@"Beta-fructofuranosidase, cell wall Invertase 4 (Os)"(PubMedID : 27208977)@Sugar degradation(PubMedID : 27330561)@glycosyl hydrolases, putative, expressed K01193: INV, beta-fructofuranosidase
20 Sobic.002G155400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@serine/threonine-protein kinase BRI1-like 1 precursor, putative, expressed -


Gene co-expression network
sample Sobic010G203600 Sobic010G203600 Sobic006G061300 Sobic006G061300 Sobic010G203600--Sobic006G061300 Sobic007G119800 Sobic007G119800 Sobic010G203600--Sobic007G119800 Sobic009G235600 Sobic009G235600 Sobic010G203600--Sobic009G235600 Sobic001G386400 Sobic001G386400 Sobic010G203600--Sobic001G386400 Sobic006G176600 Sobic006G176600 Sobic010G203600--Sobic006G176600 Sobic004G173600 Sobic004G173600 Sobic010G203600--Sobic004G173600 Sobic007G011700 Sobic007G011700 Sobic010G203600--Sobic007G011700 Sobic001G049200 Sobic001G049200 Sobic010G203600--Sobic001G049200 Sobic001G456100 Sobic001G456100 Sobic010G203600--Sobic001G456100 Sobic006G061300--Sobic010G203600 Sobic009G000200 Sobic009G000200 Sobic006G061300--Sobic009G000200 Sobic006G061300--Sobic007G011700 Sobic003G016600 Sobic003G016600 Sobic006G061300--Sobic003G016600 Sobic001G401800 Sobic001G401800 Sobic006G061300--Sobic001G401800 Sobic003G321300 Sobic003G321300 Sobic006G061300--Sobic003G321300 Sobic001G454200 Sobic001G454200 Sobic006G061300--Sobic001G454200 Sobic003G263300 Sobic003G263300 Sobic006G061300--Sobic003G263300 Sobic002G301800 Sobic002G301800 Sobic006G061300--Sobic002G301800 Sobic003G017601 Sobic003G017601 Sobic007G119800--Sobic003G017601 Sobic001G218500 Sobic001G218500 Sobic007G119800--Sobic001G218500 Sobic004G161900 Sobic004G161900 Sobic007G119800--Sobic004G161900 Sobic007G120000 Sobic007G120000 Sobic007G119800--Sobic007G120000 Sobic005G075600 Sobic005G075600 Sobic007G119800--Sobic005G075600 Sobic003G020500 Sobic003G020500 Sobic007G119800--Sobic003G020500 Sobic007G193200 Sobic007G193200 Sobic007G119800--Sobic007G193200 Sobic010G045400 Sobic010G045400 Sobic007G119800--Sobic010G045400 Sobic001G454900 Sobic001G454900 Sobic007G119800--Sobic001G454900 Sobic010G064600 Sobic010G064600 Sobic009G235600--Sobic010G064600 Sobic001G512800 Sobic001G512800 Sobic009G235600--Sobic001G512800 Sobic003G377000 Sobic003G377000 Sobic009G235600--Sobic003G377000 Sobic006G119200 Sobic006G119200 Sobic009G235600--Sobic006G119200 Sobic009G235600--Sobic001G386400 Sobic010G184300 Sobic010G184300 Sobic009G235600--Sobic010G184300 Sobic006G232000 Sobic006G232000 Sobic009G235600--Sobic006G232000 Sobic009G235600--Sobic006G176600 Sobic001G188900 Sobic001G188900 Sobic009G235600--Sobic001G188900 Sobic001G386400--Sobic006G119200 Sobic009G167700 Sobic009G167700 Sobic001G386400--Sobic009G167700 Sobic001G386400--Sobic009G000200 Sobic003G316300 Sobic003G316300 Sobic001G386400--Sobic003G316300 Sobic002G155400 Sobic002G155400 Sobic001G386400--Sobic002G155400 Sobic010G161450 Sobic010G161450 Sobic001G386400--Sobic010G161450 Sobic004G106900 Sobic004G106900 Sobic001G386400--Sobic004G106900 Sobic002G024100 Sobic002G024100 Sobic001G386400--Sobic002G024100 Sobic004G341200 Sobic004G341200 Sobic001G386400--Sobic004G341200 Sobic002G294200 Sobic002G294200 Sobic006G176600--Sobic002G294200 Sobic010G193900 Sobic010G193900 Sobic006G176600--Sobic010G193900 Sobic010G002400 Sobic010G002400 Sobic006G176600--Sobic010G002400 Sobic006G148200 Sobic006G148200 Sobic006G176600--Sobic006G148200 Sobic006G176600--Sobic001G049200 Sobic006G222100 Sobic006G222100 Sobic006G176600--Sobic006G222100 Sobic004G237600 Sobic004G237600 Sobic006G176600--Sobic004G237600 Sobic007G136100 Sobic007G136100 Sobic006G176600--Sobic007G136100 Sobic003G012200 Sobic003G012200 Sobic006G176600--Sobic003G012200 Sobic002G114800 Sobic002G114800 Sobic004G173600--Sobic002G114800 Sobic004G173600--Sobic010G193900 Sobic004G173600--Sobic001G049200 Sobic004G173600--Sobic010G002400 Sobic002G187300 Sobic002G187300 Sobic004G173600--Sobic002G187300 Sobic003G280300 Sobic003G280300 Sobic004G173600--Sobic003G280300 Sobic004G173600--Sobic006G176600 Sobic001G540100 Sobic001G540100 Sobic004G173600--Sobic001G540100 Sobic004G132300 Sobic004G132300 Sobic004G173600--Sobic004G132300 Sobic007G011700--Sobic009G000200 Sobic007G011700--Sobic006G061300 Sobic007G011700--Sobic010G203600 Sobic008G189200 Sobic008G189200 Sobic007G011700--Sobic008G189200 Sobic007G011700--Sobic001G386400 Sobic007G011700--Sobic003G316300 Sobic007G011700--Sobic009G235600 Sobic008G009100 Sobic008G009100 Sobic007G011700--Sobic008G009100 Sobic003G363100 Sobic003G363100 Sobic007G011700--Sobic003G363100 Sobic009G179200 Sobic009G179200 Sobic001G049200--Sobic009G179200 Sobic001G049200--Sobic002G114800 Sobic001G049200--Sobic010G161450 Sobic002G242500 Sobic002G242500 Sobic001G049200--Sobic002G242500 Sobic007G221100 Sobic007G221100 Sobic001G049200--Sobic007G221100 Sobic001G049200--Sobic002G294200 Sobic001G049200--Sobic004G132300 Sobic001G049200--Sobic006G176600 Sobic007G098400 Sobic007G098400 Sobic001G049200--Sobic007G098400 Sobic006G230300 Sobic006G230300 Sobic001G456100--Sobic006G230300 Sobic010G194100 Sobic010G194100 Sobic001G456100--Sobic010G194100 Sobic001G456100--Sobic001G049200 Sobic003G273700 Sobic003G273700 Sobic001G456100--Sobic003G273700 Sobic001G456100--Sobic007G221100 Sobic007G157900 Sobic007G157900 Sobic001G456100--Sobic007G157900 Sobic001G456100--Sobic010G193900 Sobic009G238900 Sobic009G238900 Sobic001G456100--Sobic009G238900 Sobic001G456100--Sobic002G242500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.