Gene annotation
Transcriptome id Sobic.004G173600.2
Synonym PDIL5-2, Sb04g022420, ATPDI8, ATPDIL5-2, PDI8
Functional annotation OsPDIL5-3 protein disulfide isomerase PDIL5-3, expressed
UniProt A0A1Z5RN17
Pfam PF13848 PF00085
Panther DB PTHR18929 PTHR18929:SF98
NCBI CDD KOG0191; Thioredoxin/protein disulfide isomerase
KEGG Orthology K09580; PDIA1, protein disulfide-isomerase A1
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G35620 : PDI-like 5-2
RAP-DB (Rice) LOC_Os02g34530.1 : OsPDIL5-3 protein disulfide isomerase PDIL5-3, expressed
MaizeGDB (Corn) Zm00025a020621
Brachypodium KQJ99842
Barley -
Wheat TraesCS2B02G321000 , TraesCS2A02G304300
Populus -


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cDNA sequences
Sobic.004G173600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G114800 CDPK - calcium-dependent protein kinase 18(PubMedID : 31721651)@CAMK_CAMK_like.32 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
2 Sobic.010G193900 N-terminal asparagine amidohydrolase, putative, expressed K14662: protein N-terminal asparagine amidohydrolase
3 Sobic.001G049200 AMP-binding enzyme, putative, expressed -
4 Sobic.010G002400 glutamine cyclotransferase precursor, putative, expressed -
5 Sobic.002G187300 calmodulin-binding protein, putative, expressed -
6 Sobic.003G280300 STE_MEK_ste7_MAP2K.2 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K04368: MAP2K1, mitogen-activated protein kinase kinase 1
7 Sobic.006G176600 aminotransferase domain containing protein, putative, expressed K00826: E2.6.1.42, branched-chain amino acid aminotransferase
8 Sobic.001G540100 aminotransferase domain containing protein, putative, expressed K00826: E2.6.1.42, branched-chain amino acid aminotransferase
9 Sobic.004G132300 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
10 Sobic.001G109300 adenylyl cyclase-associated protein, putative, expressed K17261: CAP1_2, adenylyl cyclase-associated protein
11 Sobic.008G088830 - -
12 Sobic.010G161450 - -
13 Sobic.006G002700 OsRhmbd10 - Putative Rhomboid homologue, expressed -
14 Sobic.007G136100 uncharacterized protein family UPF0016 domain containing protein, expressed -
15 Sobic.002G294200 transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4
16 Sobic.004G082900 26S protease regulatory subunit, putative, expressed K03064: PSMC6, 26S proteasome regulatory subunit T4
17 Sobic.003G169900 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase,chloroplast precursor, putative, expressed K13832: aroDE, 3-dehydroquinate dehydratase / shikimate dehydrogenase
18 Sobic.001G456100 integral membrane protein, putative, expressed -
19 Sobic.008G113600 glutathione synthetase, chloroplast precursor, putative, expressed K01920: glutathione synthase
20 Sobic.009G139800 rab GDP dissociation inhibitor alpha, putative, expressed K17255: Rab GDP dissociation inhibitor


Gene co-expression network
sample Sobic004G173600 Sobic004G173600 Sobic002G114800 Sobic002G114800 Sobic004G173600--Sobic002G114800 Sobic010G193900 Sobic010G193900 Sobic004G173600--Sobic010G193900 Sobic001G049200 Sobic001G049200 Sobic004G173600--Sobic001G049200 Sobic010G002400 Sobic010G002400 Sobic004G173600--Sobic010G002400 Sobic002G187300 Sobic002G187300 Sobic004G173600--Sobic002G187300 Sobic003G280300 Sobic003G280300 Sobic004G173600--Sobic003G280300 Sobic006G176600 Sobic006G176600 Sobic004G173600--Sobic006G176600 Sobic001G540100 Sobic001G540100 Sobic004G173600--Sobic001G540100 Sobic004G132300 Sobic004G132300 Sobic004G173600--Sobic004G132300 Sobic002G114800--Sobic001G049200 Sobic009G177400 Sobic009G177400 Sobic002G114800--Sobic009G177400 Sobic001G328000 Sobic001G328000 Sobic002G114800--Sobic001G328000 Sobic004G163300 Sobic004G163300 Sobic002G114800--Sobic004G163300 Sobic002G114800--Sobic004G173600 Sobic009G102300 Sobic009G102300 Sobic002G114800--Sobic009G102300 Sobic002G306700 Sobic002G306700 Sobic002G114800--Sobic002G306700 Sobic005G134600 Sobic005G134600 Sobic002G114800--Sobic005G134600 Sobic002G114800--Sobic001G540100 Sobic007G136100 Sobic007G136100 Sobic010G193900--Sobic007G136100 Sobic010G193900--Sobic010G002400 Sobic010G193900--Sobic006G176600 Sobic002G294200 Sobic002G294200 Sobic010G193900--Sobic002G294200 Sobic010G193900--Sobic004G173600 Sobic010G193900--Sobic002G114800 Sobic004G081800 Sobic004G081800 Sobic010G193900--Sobic004G081800 Sobic001G283200 Sobic001G283200 Sobic010G193900--Sobic001G283200 Sobic010G193900--Sobic001G049200 Sobic009G179200 Sobic009G179200 Sobic001G049200--Sobic009G179200 Sobic001G049200--Sobic002G114800 Sobic010G161450 Sobic010G161450 Sobic001G049200--Sobic010G161450 Sobic002G242500 Sobic002G242500 Sobic001G049200--Sobic002G242500 Sobic007G221100 Sobic007G221100 Sobic001G049200--Sobic007G221100 Sobic001G049200--Sobic002G294200 Sobic001G049200--Sobic004G132300 Sobic001G049200--Sobic006G176600 Sobic007G098400 Sobic007G098400 Sobic001G049200--Sobic007G098400 Sobic003G338500 Sobic003G338500 Sobic010G002400--Sobic003G338500 Sobic004G275700 Sobic004G275700 Sobic010G002400--Sobic004G275700 Sobic001G201500 Sobic001G201500 Sobic010G002400--Sobic001G201500 Sobic010G002400--Sobic010G193900 Sobic005G155700 Sobic005G155700 Sobic010G002400--Sobic005G155700 Sobic010G223300 Sobic010G223300 Sobic010G002400--Sobic010G223300 Sobic002G308500 Sobic002G308500 Sobic010G002400--Sobic002G308500 Sobic003G012200 Sobic003G012200 Sobic010G002400--Sobic003G012200 Sobic010G002400--Sobic006G176600 Sobic003G047100 Sobic003G047100 Sobic002G187300--Sobic003G047100 Sobic006G002700 Sobic006G002700 Sobic002G187300--Sobic006G002700 Sobic009G088100 Sobic009G088100 Sobic002G187300--Sobic009G088100 Sobic004G348900 Sobic004G348900 Sobic002G187300--Sobic004G348900 Sobic001G109300 Sobic001G109300 Sobic002G187300--Sobic001G109300 Sobic006G252200 Sobic006G252200 Sobic002G187300--Sobic006G252200 Sobic010G080200 Sobic010G080200 Sobic002G187300--Sobic010G080200 Sobic004G130900 Sobic004G130900 Sobic002G187300--Sobic004G130900 Sobic002G187300--Sobic004G173600 Sobic009G139800 Sobic009G139800 Sobic003G280300--Sobic009G139800 Sobic003G186700 Sobic003G186700 Sobic003G280300--Sobic003G186700 Sobic001G103900 Sobic001G103900 Sobic003G280300--Sobic001G103900 Sobic003G280300--Sobic010G002400 Sobic003G280300--Sobic004G173600 Sobic003G280300--Sobic010G080200 Sobic006G114400 Sobic006G114400 Sobic003G280300--Sobic006G114400 Sobic001G010700 Sobic001G010700 Sobic003G280300--Sobic001G010700 Sobic001G265600 Sobic001G265600 Sobic003G280300--Sobic001G265600 Sobic006G176600--Sobic002G294200 Sobic006G176600--Sobic010G193900 Sobic006G176600--Sobic010G002400 Sobic006G148200 Sobic006G148200 Sobic006G176600--Sobic006G148200 Sobic006G176600--Sobic001G049200 Sobic006G222100 Sobic006G222100 Sobic006G176600--Sobic006G222100 Sobic004G237600 Sobic004G237600 Sobic006G176600--Sobic004G237600 Sobic006G176600--Sobic007G136100 Sobic006G176600--Sobic003G012200 Sobic001G540100--Sobic002G114800 Sobic001G540100--Sobic004G173600 Sobic007G092600 Sobic007G092600 Sobic001G540100--Sobic007G092600 Sobic001G057200 Sobic001G057200 Sobic001G540100--Sobic001G057200 Sobic001G540100--Sobic009G177400 Sobic010G274500 Sobic010G274500 Sobic001G540100--Sobic010G274500 Sobic008G156300 Sobic008G156300 Sobic001G540100--Sobic008G156300 Sobic001G540100--Sobic002G187300 Sobic010G084000 Sobic010G084000 Sobic001G540100--Sobic010G084000 Sobic004G132300--Sobic001G283200 Sobic001G033500 Sobic001G033500 Sobic004G132300--Sobic001G033500 Sobic006G217700 Sobic006G217700 Sobic004G132300--Sobic006G217700 Sobic001G206900 Sobic001G206900 Sobic004G132300--Sobic001G206900 Sobic004G132300--Sobic006G148200 Sobic001G237500 Sobic001G237500 Sobic004G132300--Sobic001G237500 Sobic004G132300--Sobic002G294200 Sobic004G274400 Sobic004G274400 Sobic004G132300--Sobic004G274400 Sobic006G034000 Sobic006G034000 Sobic004G132300--Sobic006G034000
Octagon: transcription factors


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