Gene annotation
Transcriptome id Sobic.001G456100.4,Sobic.001G456100.3,Sobic.001G456100.1,Sobic.001G456100.2
Synonym Sb01g042860, GONST3
Functional annotation integral membrane protein, putative, expressed
UniProt A0A1B6QPM1 , A0A1B6QPM2
Pfam PF03151
Panther DB PTHR11132 PTHR11132:SF34
NCBI CDD KOG1444; Nucleotide-sugar transporter VRG4/SQV-7
KEGG Orthology -
Gene Ontology GO:0015780; nucleotide-sugar transmembrane transport GO:0005794Golgi apparatus


Orthologs (automatic annotation)
TAIR AT1G76340 : golgi nucleotide sugar transporter 3
RAP-DB (Rice) LOC_Os03g11590.1 : integral membrane protein, putative, expressed
MaizeGDB (Corn) Zm00025a001295 , Zm00025a053067
Brachypodium PNT77879 , PNT77875 , PNT77877 , PNT77876 , PNT77873 , PNT77878 , KQK22894 , KQK22892 , KQK22893 , KQK22890 , KQJ97575 , KQK22889 , KQK22888
Barley HORVU1Hr1G049480.21 , HORVU1Hr1G049480.20 , HORVU1Hr1G049480.1 , HORVU1Hr1G049480.2 , HORVU1Hr1G049480.3 , HORVU1Hr1G049480.4 , HORVU1Hr1G049480.5 , HORVU1Hr1G049480.6 , HORVU1Hr1G049480.7 , HORVU1Hr1G049480.8 , HORVU1Hr1G049480.9 , HORVU1Hr1G049480.18 , HORVU1Hr1G049480.12 , HORVU1Hr1G049480.13 , HORVU1Hr1G049480.10 , HORVU1Hr1G049480.11 , HORVU1Hr1G049480.16 , HORVU1Hr1G049480.17 , HORVU1Hr1G049480.14 , HORVU1Hr1G049480.15 , HORVU1Hr1G049480.19
Wheat TraesCS4A02G058700 , TraesCS4D02G245400
Populus -


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cDNA sequences
Sobic.001G456100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G230300 similar to LOC Os04g54190: cysteine-rich receptor-like protein kinase 8 precursor(PubMedID : 24655390)@similar to LOC.Os04g54190:cysteine-rich receptor-like protein kinase 8 precursor(PubMedID : 24655390)@cysteine-rich receptor-like protein kinase 8 precursor, putative, expressed K04733: interleukin-1 receptor-associated kinase 4
2 Sobic.010G194100 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
3 Sobic.001G049200 AMP-binding enzyme, putative, expressed -
4 Sobic.003G273700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@uncharacterized protein PA4923, putative, expressed K06966: pyrimidine/purine-5'-nucleotide nucleosidase
5 Sobic.007G221100 GRAM and C2 domains containing protein, putative, expressed -
6 Sobic.007G157900 gibberellin receptor GID1L2, putative, expressed -
7 Sobic.010G193900 N-terminal asparagine amidohydrolase, putative, expressed K14662: protein N-terminal asparagine amidohydrolase
8 Sobic.009G238900 dehydrogenase, putative, expressed K00031: IDH1, IDH2, isocitrate dehydrogenase
9 Sobic.002G242500 Expressed in older stem(PubMedID : 28649278)@WRKY90, expressed K18835: WRKY transcription factor 2
10 Sobic.006G002700 OsRhmbd10 - Putative Rhomboid homologue, expressed -
11 Sobic.009G054100 GDSL-like lipase/acylhydrolase, putative, expressed -
12 Sobic.005G134600 natural resistance-associated macrophage protein, putative, expressed K12347: SLC11A1, natural resistance-associated macrophage protein 1
13 Sobic.003G417100 esterase, putative, expressed -
14 Sobic.002G114800 CDPK - calcium-dependent protein kinase 18(PubMedID : 31721651)@CAMK_CAMK_like.32 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
15 Sobic.002G392800 thymidylate kinase, putative, expressed K00943: tmk, dTMP kinase
16 Sobic.003G389000 Os1bglu4 - beta-glucosidase-like protein without signal sequence, expressed K01188: beta-glucosidase
17 Sobic.002G283900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.002G155500 ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
19 Sobic.001G108000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@maf, putative, expressed K06287: septum formation protein
20 Sobic.004G173600 OsPDIL5-3 protein disulfide isomerase PDIL5-3, expressed K09580: PDIA1, protein disulfide-isomerase A1


Gene co-expression network
sample Sobic001G456100 Sobic001G456100 Sobic006G230300 Sobic006G230300 Sobic001G456100--Sobic006G230300 Sobic010G194100 Sobic010G194100 Sobic001G456100--Sobic010G194100 Sobic001G049200 Sobic001G049200 Sobic001G456100--Sobic001G049200 Sobic003G273700 Sobic003G273700 Sobic001G456100--Sobic003G273700 Sobic007G221100 Sobic007G221100 Sobic001G456100--Sobic007G221100 Sobic007G157900 Sobic007G157900 Sobic001G456100--Sobic007G157900 Sobic010G193900 Sobic010G193900 Sobic001G456100--Sobic010G193900 Sobic009G238900 Sobic009G238900 Sobic001G456100--Sobic009G238900 Sobic002G242500 Sobic002G242500 Sobic001G456100--Sobic002G242500 Sobic001G299100 Sobic001G299100 Sobic006G230300--Sobic001G299100 Sobic003G417100 Sobic003G417100 Sobic006G230300--Sobic003G417100 Sobic006G092700 Sobic006G092700 Sobic006G230300--Sobic006G092700 Sobic008G191400 Sobic008G191400 Sobic006G230300--Sobic008G191400 Sobic003G215200 Sobic003G215200 Sobic006G230300--Sobic003G215200 Sobic010G028100 Sobic010G028100 Sobic006G230300--Sobic010G028100 Sobic003G000100 Sobic003G000100 Sobic006G230300--Sobic003G000100 Sobic006G230300--Sobic010G194100 Sobic003G017601 Sobic003G017601 Sobic006G230300--Sobic003G017601 Sobic010G194100--Sobic003G417100 Sobic006G256900 Sobic006G256900 Sobic010G194100--Sobic006G256900 Sobic006G274933 Sobic006G274933 Sobic010G194100--Sobic006G274933 Sobic002G185800 Sobic002G185800 Sobic010G194100--Sobic002G185800 Sobic004G262500 Sobic004G262500 Sobic010G194100--Sobic004G262500 Sobic003G404600 Sobic003G404600 Sobic010G194100--Sobic003G404600 Sobic001G176400 Sobic001G176400 Sobic010G194100--Sobic001G176400 Sobic003G280400 Sobic003G280400 Sobic010G194100--Sobic003G280400 Sobic010G194100--Sobic006G230300 Sobic009G179200 Sobic009G179200 Sobic001G049200--Sobic009G179200 Sobic002G114800 Sobic002G114800 Sobic001G049200--Sobic002G114800 Sobic010G161450 Sobic010G161450 Sobic001G049200--Sobic010G161450 Sobic001G049200--Sobic002G242500 Sobic001G049200--Sobic007G221100 Sobic002G294200 Sobic002G294200 Sobic001G049200--Sobic002G294200 Sobic004G132300 Sobic004G132300 Sobic001G049200--Sobic004G132300 Sobic006G176600 Sobic006G176600 Sobic001G049200--Sobic006G176600 Sobic007G098400 Sobic007G098400 Sobic001G049200--Sobic007G098400 Sobic001G302500 Sobic001G302500 Sobic003G273700--Sobic001G302500 Sobic010G192432 Sobic010G192432 Sobic003G273700--Sobic010G192432 Sobic003G273700--Sobic010G194100 Sobic003G273700--Sobic006G230300 Sobic002G283900 Sobic002G283900 Sobic003G273700--Sobic002G283900 Sobic003G273700--Sobic007G221100 Sobic003G389000 Sobic003G389000 Sobic003G273700--Sobic003G389000 Sobic003G273700--Sobic001G456100 Sobic003G273700--Sobic010G161450 Sobic007G221100--Sobic002G242500 Sobic007G221100--Sobic001G049200 Sobic007G221100--Sobic003G273700 Sobic007G221100--Sobic009G179200 Sobic007G221100--Sobic001G456100 Sobic007G221100--Sobic010G192432 Sobic006G191100 Sobic006G191100 Sobic007G221100--Sobic006G191100 Sobic006G075600 Sobic006G075600 Sobic007G221100--Sobic006G075600 Sobic010G220600 Sobic010G220600 Sobic007G221100--Sobic010G220600 Sobic007G157900--Sobic009G238900 Sobic004G351500 Sobic004G351500 Sobic007G157900--Sobic004G351500 Sobic007G157900--Sobic010G194100 Sobic002G232700 Sobic002G232700 Sobic007G157900--Sobic002G232700 Sobic009G054100 Sobic009G054100 Sobic007G157900--Sobic009G054100 Sobic007G157900--Sobic003G417100 Sobic004G062500 Sobic004G062500 Sobic007G157900--Sobic004G062500 Sobic007G157900--Sobic004G262500 Sobic007G127100 Sobic007G127100 Sobic007G157900--Sobic007G127100 Sobic007G136100 Sobic007G136100 Sobic010G193900--Sobic007G136100 Sobic010G002400 Sobic010G002400 Sobic010G193900--Sobic010G002400 Sobic010G193900--Sobic006G176600 Sobic010G193900--Sobic002G294200 Sobic004G173600 Sobic004G173600 Sobic010G193900--Sobic004G173600 Sobic010G193900--Sobic002G114800 Sobic004G081800 Sobic004G081800 Sobic010G193900--Sobic004G081800 Sobic001G283200 Sobic001G283200 Sobic010G193900--Sobic001G283200 Sobic010G193900--Sobic001G049200 Sobic003G219800 Sobic003G219800 Sobic009G238900--Sobic003G219800 Sobic001G444800 Sobic001G444800 Sobic009G238900--Sobic001G444800 Sobic005G112800 Sobic005G112800 Sobic009G238900--Sobic005G112800 Sobic006G035900 Sobic006G035900 Sobic009G238900--Sobic006G035900 Sobic001G040100 Sobic001G040100 Sobic009G238900--Sobic001G040100 Sobic001G418100 Sobic001G418100 Sobic009G238900--Sobic001G418100 Sobic002G361700 Sobic002G361700 Sobic009G238900--Sobic002G361700 Sobic003G443300 Sobic003G443300 Sobic009G238900--Sobic003G443300 Sobic001G514200 Sobic001G514200 Sobic009G238900--Sobic001G514200 Sobic002G242500--Sobic002G294200 Sobic002G242500--Sobic007G098400 Sobic004G145200 Sobic004G145200 Sobic002G242500--Sobic004G145200 Sobic003G049300 Sobic003G049300 Sobic002G242500--Sobic003G049300 Sobic002G242500--Sobic001G049200 Sobic003G167500 Sobic003G167500 Sobic002G242500--Sobic003G167500 Sobic002G242500--Sobic007G221100 Sobic001G403700 Sobic001G403700 Sobic002G242500--Sobic001G403700 Sobic005G211400 Sobic005G211400 Sobic002G242500--Sobic005G211400
Octagon: transcription factors


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