Gene annotation
Transcriptome id Sobic.003G280300.1
Synonym ATMKK6, ANQ1, MKK6, Sb03g033190
Functional annotation STE_MEK_ste7_MAP2K.2 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed
UniProt C5XIE1
Pfam PF14531
Panther DB PTHR24361 PTHR24361:SF336
NCBI CDD KOG0581; Mitogen-activated protein kinase kinase (MAP2K)
KEGG Orthology K04368; MAP2K1, mitogen-activated protein kinase kinase 1
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G56580 : MAP kinase kinase 6
RAP-DB (Rice) LOC_Os01g32660.1 : STE_MEK_ste7_MAP2K.2 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed
MaizeGDB (Corn) Zm00025a027746
Brachypodium KQK23644 , KQK23645 , KQK23646
Barley HORVU4Hr1G079950.5 , HORVU4Hr1G079950.6 , HORVU4Hr1G079950.7 , HORVU4Hr1G079950.8 , HORVU4Hr1G079950.9 , HORVU4Hr1G079950.12 , HORVU4Hr1G079950.13 , HORVU4Hr1G079950.10 , HORVU4Hr1G079950.11
Wheat TraesCS4D02G312300 , TraesCS4D02G312300 , TraesCS4D02G312300 , TraesCS4D02G312300 , TraesCS4A02G414600 , TraesCS4A02G414600 , TraesCS4B02G315300 , TraesCS4B02G315300
Populus -


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cDNA sequences
Sobic.003G280300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G139800 rab GDP dissociation inhibitor alpha, putative, expressed K17255: Rab GDP dissociation inhibitor
2 Sobic.003G186700 ubiquitin carboxyl-terminal hydrolase 6, putative, expressed K11843: USP14, ubiquitin carboxyl-terminal hydrolase 14
3 Sobic.001G103900 signal peptide peptidase domain containing protein, expressed -
4 Sobic.010G002400 glutamine cyclotransferase precursor, putative, expressed -
5 Sobic.004G173600 OsPDIL5-3 protein disulfide isomerase PDIL5-3, expressed K09580: PDIA1, protein disulfide-isomerase A1
6 Sobic.010G080200 emp24/gp25L/p24 family protein, putative, expressed -
7 Sobic.006G114400 OsGrx_S15.2 - glutaredoxin subgroup II, expressed K07390: grxD, monothiol glutaredoxin
8 Sobic.001G010700 proteasome subunit, putative, expressed K03035: PSMD12, 26S proteasome regulatory subunit N5
9 Sobic.001G265600 aldose 1-epimerase, putative, expressed K01785: galM, aldose 1-epimerase
10 Sobic.007G136100 uncharacterized protein family UPF0016 domain containing protein, expressed -
11 Sobic.001G283200 proteasome subunit, putative, expressed K03039: PSMD13, 26S proteasome regulatory subunit N9
12 Sobic.003G047100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@thiamine pyrophosphate enzyme, C-terminal TPP binding domain containing protein, expressed K12261: 2-hydroxyacyl-CoA lyase 1
13 Sobic.005G155700 methyltransferase, putative, expressed -
14 Sobic.003G372000 proton-dependent oligopeptide transport, putative, expressed -
15 Sobic.002G419100 eukaryotic translation initiation factor 2 subunit beta, putative, expressed K03238: translation initiation factor 2 subunit 2
16 Sobic.003G087000 expressed protein -
17 Sobic.002G187300 calmodulin-binding protein, putative, expressed -
18 Sobic.006G252200 MEE34, putative, expressed K03038: PSMD7, 26S proteasome regulatory subunit N8
19 Sobic.004G132300 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
20 Sobic.001G033500 dolichyl-phosphate beta-glycosyltransferase, putative, expressed K00729: dolichyl-phosphate beta-glucosyltransferase


Gene co-expression network
sample Sobic003G280300 Sobic003G280300 Sobic009G139800 Sobic009G139800 Sobic003G280300--Sobic009G139800 Sobic003G186700 Sobic003G186700 Sobic003G280300--Sobic003G186700 Sobic001G103900 Sobic001G103900 Sobic003G280300--Sobic001G103900 Sobic010G002400 Sobic010G002400 Sobic003G280300--Sobic010G002400 Sobic004G173600 Sobic004G173600 Sobic003G280300--Sobic004G173600 Sobic010G080200 Sobic010G080200 Sobic003G280300--Sobic010G080200 Sobic006G114400 Sobic006G114400 Sobic003G280300--Sobic006G114400 Sobic001G010700 Sobic001G010700 Sobic003G280300--Sobic001G010700 Sobic001G265600 Sobic001G265600 Sobic003G280300--Sobic001G265600 Sobic009G139800--Sobic006G114400 Sobic001G109300 Sobic001G109300 Sobic009G139800--Sobic001G109300 Sobic008G113600 Sobic008G113600 Sobic009G139800--Sobic008G113600 Sobic003G428200 Sobic003G428200 Sobic009G139800--Sobic003G428200 Sobic002G141700 Sobic002G141700 Sobic009G139800--Sobic002G141700 Sobic001G058100 Sobic001G058100 Sobic009G139800--Sobic001G058100 Sobic003G087000 Sobic003G087000 Sobic009G139800--Sobic003G087000 Sobic009G139800--Sobic003G280300 Sobic009G139800--Sobic001G010700 Sobic004G082900 Sobic004G082900 Sobic003G186700--Sobic004G082900 Sobic002G419100 Sobic002G419100 Sobic003G186700--Sobic002G419100 Sobic006G044600 Sobic006G044600 Sobic003G186700--Sobic006G044600 Sobic003G186700--Sobic003G280300 Sobic004G176400 Sobic004G176400 Sobic003G186700--Sobic004G176400 Sobic003G422900 Sobic003G422900 Sobic003G186700--Sobic003G422900 Sobic003G186700--Sobic009G139800 Sobic003G186700--Sobic001G010700 Sobic002G341800 Sobic002G341800 Sobic003G186700--Sobic002G341800 Sobic003G312200 Sobic003G312200 Sobic001G103900--Sobic003G312200 Sobic008G103300 Sobic008G103300 Sobic001G103900--Sobic008G103300 Sobic008G055900 Sobic008G055900 Sobic001G103900--Sobic008G055900 Sobic006G034500 Sobic006G034500 Sobic001G103900--Sobic006G034500 Sobic003G046300 Sobic003G046300 Sobic001G103900--Sobic003G046300 Sobic001G103900--Sobic006G044600 Sobic006G055300 Sobic006G055300 Sobic001G103900--Sobic006G055300 Sobic002G300700 Sobic002G300700 Sobic001G103900--Sobic002G300700 Sobic001G091300 Sobic001G091300 Sobic001G103900--Sobic001G091300 Sobic003G338500 Sobic003G338500 Sobic010G002400--Sobic003G338500 Sobic004G275700 Sobic004G275700 Sobic010G002400--Sobic004G275700 Sobic001G201500 Sobic001G201500 Sobic010G002400--Sobic001G201500 Sobic010G193900 Sobic010G193900 Sobic010G002400--Sobic010G193900 Sobic005G155700 Sobic005G155700 Sobic010G002400--Sobic005G155700 Sobic010G223300 Sobic010G223300 Sobic010G002400--Sobic010G223300 Sobic002G308500 Sobic002G308500 Sobic010G002400--Sobic002G308500 Sobic003G012200 Sobic003G012200 Sobic010G002400--Sobic003G012200 Sobic006G176600 Sobic006G176600 Sobic010G002400--Sobic006G176600 Sobic002G114800 Sobic002G114800 Sobic004G173600--Sobic002G114800 Sobic004G173600--Sobic010G193900 Sobic001G049200 Sobic001G049200 Sobic004G173600--Sobic001G049200 Sobic004G173600--Sobic010G002400 Sobic002G187300 Sobic002G187300 Sobic004G173600--Sobic002G187300 Sobic004G173600--Sobic003G280300 Sobic004G173600--Sobic006G176600 Sobic001G540100 Sobic001G540100 Sobic004G173600--Sobic001G540100 Sobic004G132300 Sobic004G132300 Sobic004G173600--Sobic004G132300 Sobic001G051200 Sobic001G051200 Sobic010G080200--Sobic001G051200 Sobic009G238800 Sobic009G238800 Sobic010G080200--Sobic009G238800 Sobic002G281300 Sobic002G281300 Sobic010G080200--Sobic002G281300 Sobic006G217700 Sobic006G217700 Sobic010G080200--Sobic006G217700 Sobic010G080200--Sobic005G155700 Sobic001G033500 Sobic001G033500 Sobic010G080200--Sobic001G033500 Sobic001G057800 Sobic001G057800 Sobic010G080200--Sobic001G057800 Sobic002G202400 Sobic002G202400 Sobic010G080200--Sobic002G202400 Sobic010G205300 Sobic010G205300 Sobic010G080200--Sobic010G205300 Sobic006G114400--Sobic009G139800 Sobic003G009300 Sobic003G009300 Sobic006G114400--Sobic003G009300 Sobic006G114400--Sobic003G087000 Sobic002G113800 Sobic002G113800 Sobic006G114400--Sobic002G113800 Sobic004G335000 Sobic004G335000 Sobic006G114400--Sobic004G335000 Sobic006G114400--Sobic002G141700 Sobic007G142500 Sobic007G142500 Sobic006G114400--Sobic007G142500 Sobic004G194900 Sobic004G194900 Sobic006G114400--Sobic004G194900 Sobic009G225000 Sobic009G225000 Sobic006G114400--Sobic009G225000 Sobic007G176200 Sobic007G176200 Sobic001G010700--Sobic007G176200 Sobic006G252200 Sobic006G252200 Sobic001G010700--Sobic006G252200 Sobic001G458700 Sobic001G458700 Sobic001G010700--Sobic001G458700 Sobic003G330500 Sobic003G330500 Sobic001G010700--Sobic003G330500 Sobic001G010700--Sobic004G335000 Sobic002G428200 Sobic002G428200 Sobic001G010700--Sobic002G428200 Sobic004G224900 Sobic004G224900 Sobic001G010700--Sobic004G224900 Sobic003G043400 Sobic003G043400 Sobic001G010700--Sobic003G043400 Sobic002G423800 Sobic002G423800 Sobic001G010700--Sobic002G423800 Sobic003G226200 Sobic003G226200 Sobic001G265600--Sobic003G226200 Sobic002G415900 Sobic002G415900 Sobic001G265600--Sobic002G415900 Sobic008G186200 Sobic008G186200 Sobic001G265600--Sobic008G186200 Sobic010G134400 Sobic010G134400 Sobic001G265600--Sobic010G134400 Sobic002G058500 Sobic002G058500 Sobic001G265600--Sobic002G058500 Sobic009G069000 Sobic009G069000 Sobic001G265600--Sobic009G069000 Sobic001G265600--Sobic003G280300 Sobic005G079900 Sobic005G079900 Sobic001G265600--Sobic005G079900 Sobic009G234800 Sobic009G234800 Sobic001G265600--Sobic009G234800
Octagon: transcription factors


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