Gene annotation
Transcriptome id Sobic.007G136100.1
Synonym Sb07g021180
Functional annotation uncharacterized protein family UPF0016 domain containing protein, expressed
UniProt C5YL76
Pfam PF01169
Panther DB PTHR12608
NCBI CDD KOG2881; Predicted membrane protein
KEGG Orthology -
Gene Ontology GO:0016020; membrane


Orthologs (automatic annotation)
TAIR AT1G68650 : Uncharacterized protein family (UPF0016)
RAP-DB (Rice) LOC_Os08g33630.1 : uncharacterized protein family UPF0016 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a005943 , Zm00025a031137
Brachypodium KQJ98393 , KQJ98392
Barley HORVU7Hr1G008310.1 , HORVU7Hr1G008310.3 , HORVU7Hr1G008310.2
Wheat TraesCS7A02G047000 , TraesCS4A02G393600 , TraesCS7D02G041700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G283200 proteasome subunit, putative, expressed K03039: PSMD13, 26S proteasome regulatory subunit N9
2 Sobic.010G193900 N-terminal asparagine amidohydrolase, putative, expressed K14662: protein N-terminal asparagine amidohydrolase
3 Sobic.003G055700 saposin-like type B, region 1 family protein, putative, expressed K12382: PSAP, saposin
4 Sobic.003G261400 DUF292 domain containing protein, expressed -
5 Sobic.003G372000 proton-dependent oligopeptide transport, putative, expressed -
6 Sobic.004G081800 Ubiquitin family domain containing protein, expressed K11885: DNA damage-inducible protein 1
7 Sobic.003G261500 lipase, putative, expressed -
8 Sobic.006G176600 aminotransferase domain containing protein, putative, expressed K00826: E2.6.1.42, branched-chain amino acid aminotransferase
9 Sobic.001G049200 AMP-binding enzyme, putative, expressed -
10 Sobic.004G082900 26S protease regulatory subunit, putative, expressed K03064: PSMC6, 26S proteasome regulatory subunit T4
11 Sobic.002G294200 transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4
12 Sobic.010G002400 glutamine cyclotransferase precursor, putative, expressed -
13 Sobic.001G022800 actin, putative, expressed K10355: actin, other eukaryote
14 Sobic.006G252200 MEE34, putative, expressed K03038: PSMD7, 26S proteasome regulatory subunit N8
15 Sobic.001G458700 26S protease regulatory subunit 6B, putative, expressed K03063: PSMC4, 26S proteasome regulatory subunit T3
16 Sobic.010G161450 - -
17 Sobic.004G275700 adaptor complexes medium subunit family domain containing protein, expressed K11826: AP-2 complex subunit mu-1
18 Sobic.004G132300 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
19 Sobic.009G139800 rab GDP dissociation inhibitor alpha, putative, expressed K17255: Rab GDP dissociation inhibitor
20 Sobic.002G033400 ferredoxin--NADP reductase, chloroplast precursor, putative, expressed K02641: ferredoxin--NADP+ reductase


Gene co-expression network
sample Sobic007G136100 Sobic007G136100 Sobic001G283200 Sobic001G283200 Sobic007G136100--Sobic001G283200 Sobic010G193900 Sobic010G193900 Sobic007G136100--Sobic010G193900 Sobic003G055700 Sobic003G055700 Sobic007G136100--Sobic003G055700 Sobic003G261400 Sobic003G261400 Sobic007G136100--Sobic003G261400 Sobic003G372000 Sobic003G372000 Sobic007G136100--Sobic003G372000 Sobic004G081800 Sobic004G081800 Sobic007G136100--Sobic004G081800 Sobic003G261500 Sobic003G261500 Sobic007G136100--Sobic003G261500 Sobic006G176600 Sobic006G176600 Sobic007G136100--Sobic006G176600 Sobic001G049200 Sobic001G049200 Sobic007G136100--Sobic001G049200 Sobic001G458700 Sobic001G458700 Sobic001G283200--Sobic001G458700 Sobic001G283200--Sobic003G261400 Sobic006G252200 Sobic006G252200 Sobic001G283200--Sobic006G252200 Sobic001G033500 Sobic001G033500 Sobic001G283200--Sobic001G033500 Sobic004G348900 Sobic004G348900 Sobic001G283200--Sobic004G348900 Sobic004G181900 Sobic004G181900 Sobic001G283200--Sobic004G181900 Sobic003G349300 Sobic003G349300 Sobic001G283200--Sobic003G349300 Sobic007G176200 Sobic007G176200 Sobic001G283200--Sobic007G176200 Sobic004G082900 Sobic004G082900 Sobic001G283200--Sobic004G082900 Sobic010G193900--Sobic007G136100 Sobic010G002400 Sobic010G002400 Sobic010G193900--Sobic010G002400 Sobic010G193900--Sobic006G176600 Sobic002G294200 Sobic002G294200 Sobic010G193900--Sobic002G294200 Sobic004G173600 Sobic004G173600 Sobic010G193900--Sobic004G173600 Sobic002G114800 Sobic002G114800 Sobic010G193900--Sobic002G114800 Sobic010G193900--Sobic004G081800 Sobic010G193900--Sobic001G283200 Sobic010G193900--Sobic001G049200 Sobic003G055700--Sobic007G136100 Sobic005G044800 Sobic005G044800 Sobic003G055700--Sobic005G044800 Sobic001G219300 Sobic001G219300 Sobic003G055700--Sobic001G219300 Sobic001G048200 Sobic001G048200 Sobic003G055700--Sobic001G048200 Sobic006G244700 Sobic006G244700 Sobic003G055700--Sobic006G244700 Sobic008G032600 Sobic008G032600 Sobic003G055700--Sobic008G032600 Sobic009G139900 Sobic009G139900 Sobic003G055700--Sobic009G139900 Sobic003G055700--Sobic003G372000 Sobic004G080100 Sobic004G080100 Sobic003G055700--Sobic004G080100 Sobic003G261400--Sobic001G283200 Sobic002G281300 Sobic002G281300 Sobic003G261400--Sobic002G281300 Sobic003G261400--Sobic003G261500 Sobic007G045600 Sobic007G045600 Sobic003G261400--Sobic007G045600 Sobic003G261400--Sobic001G458700 Sobic004G130900 Sobic004G130900 Sobic003G261400--Sobic004G130900 Sobic003G124800 Sobic003G124800 Sobic003G261400--Sobic003G124800 Sobic001G051200 Sobic001G051200 Sobic003G261400--Sobic001G051200 Sobic010G000900 Sobic010G000900 Sobic003G261400--Sobic010G000900 Sobic001G085100 Sobic001G085100 Sobic003G372000--Sobic001G085100 Sobic003G372000--Sobic005G044800 Sobic003G012200 Sobic003G012200 Sobic003G372000--Sobic003G012200 Sobic003G372000--Sobic001G283200 Sobic009G123600 Sobic009G123600 Sobic003G372000--Sobic009G123600 Sobic004G358600 Sobic004G358600 Sobic003G372000--Sobic004G358600 Sobic003G372000--Sobic003G261400 Sobic003G372000--Sobic006G244700 Sobic009G075800 Sobic009G075800 Sobic003G372000--Sobic009G075800 Sobic004G081800--Sobic001G458700 Sobic004G081800--Sobic003G261400 Sobic002G341800 Sobic002G341800 Sobic004G081800--Sobic002G341800 Sobic004G224900 Sobic004G224900 Sobic004G081800--Sobic004G224900 Sobic004G081800--Sobic007G176200 Sobic001G502200 Sobic001G502200 Sobic004G081800--Sobic001G502200 Sobic001G010700 Sobic001G010700 Sobic004G081800--Sobic001G010700 Sobic007G168600 Sobic007G168600 Sobic004G081800--Sobic007G168600 Sobic004G081800--Sobic006G252200 Sobic003G261500--Sobic003G261400 Sobic003G217400 Sobic003G217400 Sobic003G261500--Sobic003G217400 Sobic003G261500--Sobic010G000900 Sobic003G261500--Sobic001G283200 Sobic003G261500--Sobic007G168600 Sobic003G261500--Sobic001G051200 Sobic004G212200 Sobic004G212200 Sobic003G261500--Sobic004G212200 Sobic003G261500--Sobic003G124800 Sobic004G086600 Sobic004G086600 Sobic003G261500--Sobic004G086600 Sobic006G176600--Sobic002G294200 Sobic006G176600--Sobic010G193900 Sobic006G176600--Sobic010G002400 Sobic006G148200 Sobic006G148200 Sobic006G176600--Sobic006G148200 Sobic006G176600--Sobic001G049200 Sobic006G222100 Sobic006G222100 Sobic006G176600--Sobic006G222100 Sobic004G237600 Sobic004G237600 Sobic006G176600--Sobic004G237600 Sobic006G176600--Sobic007G136100 Sobic006G176600--Sobic003G012200 Sobic009G179200 Sobic009G179200 Sobic001G049200--Sobic009G179200 Sobic001G049200--Sobic002G114800 Sobic010G161450 Sobic010G161450 Sobic001G049200--Sobic010G161450 Sobic002G242500 Sobic002G242500 Sobic001G049200--Sobic002G242500 Sobic007G221100 Sobic007G221100 Sobic001G049200--Sobic007G221100 Sobic001G049200--Sobic002G294200 Sobic004G132300 Sobic004G132300 Sobic001G049200--Sobic004G132300 Sobic001G049200--Sobic006G176600 Sobic007G098400 Sobic007G098400 Sobic001G049200--Sobic007G098400
Octagon: transcription factors


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