Gene annotation
Transcriptome id Sobic.003G440900.1
Synonym Sb03g047060, FRUCT5, AtcwINV3, INV2;INV2;INV2, ATFRUCT5
Functional annotation Invertase genes (PubMedID : 24456189)
"Beta-fructofuranosidase, cell wall Invertase 4 (Os)" (PubMedID : 27208977)
Sugar degradation (PubMedID : 27330561)
glycosyl hydrolases, putative, expressed
UniProt A0A1W0W1H5
Pfam PF08244 PF00251
Panther DB PTHR31953 PTHR31953:SF9
NCBI CDD -
KEGG Orthology K01193; INV, beta-fructofuranosidase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G55120 : beta-fructofuranosidase 5
RAP-DB (Rice) LOC_Os01g73580.1 : glycosyl hydrolases, putative, expressed
MaizeGDB (Corn) Zm00025a056002 , Zm00025a025860
Brachypodium KQJ99999 , PNT73659 , PNT73658 , KQK11711
Barley HORVU5Hr1G124030.22 , HORVU5Hr1G124030.23 , HORVU5Hr1G124030.20 , HORVU5Hr1G124030.21 , HORVU5Hr1G124030.9 , HORVU5Hr1G124030.3 , HORVU5Hr1G124030.2 , HORVU5Hr1G124030.1 , HORVU5Hr1G124030.7 , HORVU5Hr1G124030.6 , HORVU5Hr1G124030.5 , HORVU5Hr1G124030.4 , HORVU3Hr1G113100.15 , HORVU5Hr1G124030.19 , HORVU5Hr1G124030.18 , HORVU5Hr1G124030.13 , HORVU5Hr1G124030.12 , HORVU5Hr1G124030.11 , HORVU5Hr1G124030.10 , HORVU5Hr1G124030.17 , HORVU5Hr1G124030.16 , HORVU5Hr1G124030.15 , HORVU5Hr1G124030.14 , HORVU3Hr1G113100.13 , HORVU3Hr1G113100.12 , HORVU3Hr1G113100.10 , HORVU3Hr1G113100.14 , HORVU0Hr1G014400.1 , HORVU3Hr1G113100.3 , HORVU3Hr1G113100.2 , HORVU3Hr1G113100.1 , HORVU3Hr1G113100.6 , HORVU3Hr1G113100.5 , HORVU3Hr1G113100.4 , HORVU3Hr1G113100.9 , HORVU3Hr1G113100.8 , HORVU6Hr1G012550.5 , HORVU6Hr1G012550.4 , HORVU6Hr1G012550.7 , HORVU6Hr1G012550.6 , HORVU6Hr1G012550.1 , HORVU6Hr1G012550.3 , HORVU6Hr1G012550.2 , HORVU6Hr1G012550.9 , HORVU6Hr1G012550.8 , HORVU6Hr1G012550.11 , HORVU6Hr1G012550.10 , HORVU6Hr1G012550.12 , HORVU3Hr1G113100.11 , HORVU3Hr1G113100.16
Wheat TraesCS4A02G321600 , TraesCS4A02G321600 , TraesCS5B02G556700 , TraesCS5B02G556700 , TraesCS6D02G066800 , TraesCS5B02G557400 , TraesCS6A02G060800 , TraesCS4A02G321500 , TraesCS4A02G321500 , TraesCS6B02G080800 , TraesCS5D02G553000 , TraesCS5D02G553000 , TraesCS3A02G516900 , TraesCS5D02G551900 , TraesCS6A02G069000 , TraesCS3D02G524600 , TraesCS5B02G557100 , TraesCS6D02G064200 , TraesCS6D02G064200 , TraesCS3B02G584500 , TraesCS5D02G552000 , TraesCS6D02G064300 , TraesCS4A02G321400 , TraesCS4A02G321400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G117900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@glycosyl hydrolase, family 31, putative, expressed K01187: alpha-glucosidase
2 Sobic.005G024900 major facilitator superfamily antiporter, putative, expressed -
3 Sobic.002G422500 short-chain dehydrogenase/reductase, putative, expressed K15095: (+)-neomenthol dehydrogenase
4 Sobic.007G196300 ubiquitin-associated protein, putative, expressed -
5 Sobic.004G173600 OsPDIL5-3 protein disulfide isomerase PDIL5-3, expressed K09580: PDIA1, protein disulfide-isomerase A1
6 Sobic.002G087800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@1-aminocyclopropane-1-carboxylate oxidase 2, putative, expressed -
7 Sobic.010G193900 N-terminal asparagine amidohydrolase, putative, expressed K14662: protein N-terminal asparagine amidohydrolase
8 Sobic.006G247100 plasma membrane ATPase, putative, expressed K01535: PMA1, H+-transporting ATPase
9 Sobic.007G136100 uncharacterized protein family UPF0016 domain containing protein, expressed -
10 Sobic.003G080900 Ser/Thr protein kinase, putative, expressed -
11 Sobic.002G114800 CDPK - calcium-dependent protein kinase 18(PubMedID : 31721651)@CAMK_CAMK_like.32 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
12 Sobic.001G386400 phospholipid-transporting ATPase, putative, expressed K14802: DRS2, phospholipid-transporting ATPase
13 Sobic.002G306700 expressed protein -
14 Sobic.004G153100 disease resistance protein, putative, expressed -
15 Sobic.009G167700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@NLI interacting factor-like phosphatase, putative, expressed K15731: carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase
16 Sobic.006G244400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@nuclease PA3, putative, expressed -
17 Sobic.004G106900 "C3 PTPC, root-inducible gene"(PubMedID : 2308851)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phosphoenolphyruvate carboxylase(PubMedID : 26904072)@phosphoenolpyruvate carboxylase, putative, expressed K01595: phosphoenolpyruvate carboxylase
18 Sobic.010G002400 glutamine cyclotransferase precursor, putative, expressed -
19 Sobic.010G203600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
20 Sobic.001G328000 phenazine biosynthesis protein, putative, expressed -


Gene co-expression network
sample Sobic003G440900 Sobic003G440900 Sobic002G117900 Sobic002G117900 Sobic003G440900--Sobic002G117900 Sobic005G024900 Sobic005G024900 Sobic003G440900--Sobic005G024900 Sobic002G422500 Sobic002G422500 Sobic003G440900--Sobic002G422500 Sobic007G196300 Sobic007G196300 Sobic003G440900--Sobic007G196300 Sobic004G173600 Sobic004G173600 Sobic003G440900--Sobic004G173600 Sobic002G087800 Sobic002G087800 Sobic003G440900--Sobic002G087800 Sobic010G193900 Sobic010G193900 Sobic003G440900--Sobic010G193900 Sobic006G247100 Sobic006G247100 Sobic003G440900--Sobic006G247100 Sobic007G136100 Sobic007G136100 Sobic003G440900--Sobic007G136100 Sobic002G117900--Sobic003G440900 Sobic007G120000 Sobic007G120000 Sobic002G117900--Sobic007G120000 Sobic003G080900 Sobic003G080900 Sobic002G117900--Sobic003G080900 Sobic002G117900--Sobic005G024900 Sobic009G084300 Sobic009G084300 Sobic002G117900--Sobic009G084300 Sobic007G021200 Sobic007G021200 Sobic002G117900--Sobic007G021200 Sobic002G117900--Sobic007G196300 Sobic003G106300 Sobic003G106300 Sobic002G117900--Sobic003G106300 Sobic002G155400 Sobic002G155400 Sobic002G117900--Sobic002G155400 Sobic005G024900--Sobic002G087800 Sobic001G132000 Sobic001G132000 Sobic005G024900--Sobic001G132000 Sobic003G061400 Sobic003G061400 Sobic005G024900--Sobic003G061400 Sobic005G024900--Sobic003G440900 Sobic003G241500 Sobic003G241500 Sobic005G024900--Sobic003G241500 Sobic004G333200 Sobic004G333200 Sobic005G024900--Sobic004G333200 Sobic006G244400 Sobic006G244400 Sobic005G024900--Sobic006G244400 Sobic005G152200 Sobic005G152200 Sobic005G024900--Sobic005G152200 Sobic006G127100 Sobic006G127100 Sobic005G024900--Sobic006G127100 Sobic002G422500--Sobic010G193900 Sobic002G422500--Sobic003G440900 Sobic001G456100 Sobic001G456100 Sobic002G422500--Sobic001G456100 Sobic003G273700 Sobic003G273700 Sobic002G422500--Sobic003G273700 Sobic002G422500--Sobic005G152200 Sobic010G203600 Sobic010G203600 Sobic002G422500--Sobic010G203600 Sobic002G294200 Sobic002G294200 Sobic002G422500--Sobic002G294200 Sobic005G211400 Sobic005G211400 Sobic002G422500--Sobic005G211400 Sobic002G242500 Sobic002G242500 Sobic002G422500--Sobic002G242500 Sobic002G283900 Sobic002G283900 Sobic007G196300--Sobic002G283900 Sobic007G196300--Sobic005G024900 Sobic007G196300--Sobic003G440900 Sobic007G196300--Sobic004G173600 Sobic007G196300--Sobic003G080900 Sobic003G388300 Sobic003G388300 Sobic007G196300--Sobic003G388300 Sobic007G196300--Sobic007G120000 Sobic007G196300--Sobic003G106300 Sobic007G196300--Sobic005G152200 Sobic002G114800 Sobic002G114800 Sobic004G173600--Sobic002G114800 Sobic004G173600--Sobic010G193900 Sobic001G049200 Sobic001G049200 Sobic004G173600--Sobic001G049200 Sobic010G002400 Sobic010G002400 Sobic004G173600--Sobic010G002400 Sobic002G187300 Sobic002G187300 Sobic004G173600--Sobic002G187300 Sobic003G280300 Sobic003G280300 Sobic004G173600--Sobic003G280300 Sobic006G176600 Sobic006G176600 Sobic004G173600--Sobic006G176600 Sobic001G540100 Sobic001G540100 Sobic004G173600--Sobic001G540100 Sobic004G132300 Sobic004G132300 Sobic004G173600--Sobic004G132300 Sobic002G087800--Sobic005G024900 Sobic009G057300 Sobic009G057300 Sobic002G087800--Sobic009G057300 Sobic003G388251 Sobic003G388251 Sobic002G087800--Sobic003G388251 Sobic009G226600 Sobic009G226600 Sobic002G087800--Sobic009G226600 Sobic002G087800--Sobic003G241500 Sobic001G474500 Sobic001G474500 Sobic002G087800--Sobic001G474500 Sobic003G061800 Sobic003G061800 Sobic002G087800--Sobic003G061800 Sobic001G305800 Sobic001G305800 Sobic002G087800--Sobic001G305800 Sobic005G178100 Sobic005G178100 Sobic002G087800--Sobic005G178100 Sobic010G193900--Sobic007G136100 Sobic010G193900--Sobic010G002400 Sobic010G193900--Sobic006G176600 Sobic010G193900--Sobic002G294200 Sobic010G193900--Sobic004G173600 Sobic010G193900--Sobic002G114800 Sobic004G081800 Sobic004G081800 Sobic010G193900--Sobic004G081800 Sobic001G283200 Sobic001G283200 Sobic010G193900--Sobic001G283200 Sobic010G193900--Sobic001G049200 Sobic001G089800 Sobic001G089800 Sobic006G247100--Sobic001G089800 Sobic003G257100 Sobic003G257100 Sobic006G247100--Sobic003G257100 Sobic004G225200 Sobic004G225200 Sobic006G247100--Sobic004G225200 Sobic004G225100 Sobic004G225100 Sobic006G247100--Sobic004G225100 Sobic006G199000 Sobic006G199000 Sobic006G247100--Sobic006G199000 Sobic002G244100 Sobic002G244100 Sobic006G247100--Sobic002G244100 Sobic001G386400 Sobic001G386400 Sobic006G247100--Sobic001G386400 Sobic002G352800 Sobic002G352800 Sobic006G247100--Sobic002G352800 Sobic004G125900 Sobic004G125900 Sobic006G247100--Sobic004G125900 Sobic007G136100--Sobic001G283200 Sobic007G136100--Sobic010G193900 Sobic003G055700 Sobic003G055700 Sobic007G136100--Sobic003G055700 Sobic003G261400 Sobic003G261400 Sobic007G136100--Sobic003G261400 Sobic003G372000 Sobic003G372000 Sobic007G136100--Sobic003G372000 Sobic007G136100--Sobic004G081800 Sobic003G261500 Sobic003G261500 Sobic007G136100--Sobic003G261500 Sobic007G136100--Sobic006G176600 Sobic007G136100--Sobic001G049200
Octagon: transcription factors


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