Gene annotation
Transcriptome id Sobic.002G117900.2
Synonym Sb02g010060, HGL1
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
glycosyl hydrolase, family 31, putative, expressed
UniProt A0A1W0W3E5
Pfam PF13802 PF01055
Panther DB PTHR22762 PTHR22762:SF7
NCBI CDD KOG1065; Maltase glucoamylase and related hydrolases, glycosyl hydrolase family 31
KEGG Orthology K01187; alpha-glucosidase
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT3G23640 : heteroglycan glucosidase 1
RAP-DB (Rice) LOC_Os07g23880.1 : glycosyl hydrolase, family 31, putative, expressed
MaizeGDB (Corn) Zm00025a045748 , Zm00025a013594
Brachypodium KQK20106
Barley HORVU7Hr1G028010.9 , HORVU7Hr1G028010.1 , HORVU7Hr1G028010.3 , HORVU7Hr1G028010.4 , HORVU7Hr1G028010.6 , HORVU7Hr1G028010.7 , HORVU7Hr1G028010.13 , HORVU7Hr1G028010.11 , HORVU7Hr1G028010.16 , HORVU7Hr1G028010.17 , HORVU7Hr1G028010.14 , HORVU7Hr1G028010.15 , HORVU1Hr1G057330.1 , HORVU1Hr1G057330.3 , HORVU1Hr1G057330.2 , HORVU1Hr1G057330.5 , HORVU1Hr1G057330.4 , HORVU1Hr1G057330.7 , HORVU1Hr1G057330.6 , HORVU1Hr1G057330.9 , HORVU1Hr1G057330.8 , HORVU1Hr1G057330.20 , HORVU1Hr1G057330.15 , HORVU1Hr1G057330.14 , HORVU1Hr1G057330.17 , HORVU1Hr1G057330.16 , HORVU1Hr1G057330.11 , HORVU1Hr1G057330.10 , HORVU1Hr1G057330.13 , HORVU1Hr1G057330.12 , HORVU1Hr1G057330.19 , HORVU1Hr1G057330.18
Wheat TraesCS7A02G134500 , TraesCS7D02G133900 , TraesCS7D02G133900 , TraesCS1A02G238900 , TraesCS7B02G035700 , TraesCS1A02G238900 , TraesCS1B02G251000 , TraesCS1B02G251000 , TraesCS1B02G251000 , TraesCS1D02G239100
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G440900 Invertase genes(PubMedID : 24456189)@"Beta-fructofuranosidase, cell wall Invertase 4 (Os)"(PubMedID : 27208977)@Sugar degradation(PubMedID : 27330561)@glycosyl hydrolases, putative, expressed K01193: INV, beta-fructofuranosidase
2 Sobic.007G120000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ABC transporter, ATP-binding protein, putative, expressed -
3 Sobic.003G080900 Ser/Thr protein kinase, putative, expressed -
4 Sobic.005G024900 major facilitator superfamily antiporter, putative, expressed -
5 Sobic.009G084300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@phosphorylase domain containing protein, putative, expressed -
6 Sobic.007G021200 carrier, putative, expressed -
7 Sobic.007G196300 ubiquitin-associated protein, putative, expressed -
8 Sobic.003G106300 3-beta-hydroxysteroid-Delta-isomerase, putative, expressed K01824: cholestenol Delta-isomerase
9 Sobic.002G155400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@serine/threonine-protein kinase BRI1-like 1 precursor, putative, expressed -
10 Sobic.002G114800 CDPK - calcium-dependent protein kinase 18(PubMedID : 31721651)@CAMK_CAMK_like.32 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
11 Sobic.009G161401 - -
12 Sobic.003G020500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GDSL-like lipase/acylhydrolase, putative, expressed -
13 Sobic.004G153100 disease resistance protein, putative, expressed -
14 Sobic.005G075600 rp3 protein, putative, expressed -
15 Sobic.001G386400 phospholipid-transporting ATPase, putative, expressed K14802: DRS2, phospholipid-transporting ATPase
16 Sobic.001G328000 phenazine biosynthesis protein, putative, expressed -
17 Sobic.001G260600 expressed protein -
18 Sobic.003G273700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@uncharacterized protein PA4923, putative, expressed K06966: pyrimidine/purine-5'-nucleotide nucleosidase
19 Sobic.001G218500 MATH domain containing protein, expressed -
20 Sobic.002G422500 short-chain dehydrogenase/reductase, putative, expressed K15095: (+)-neomenthol dehydrogenase


Gene co-expression network
sample Sobic002G117900 Sobic002G117900 Sobic003G440900 Sobic003G440900 Sobic002G117900--Sobic003G440900 Sobic007G120000 Sobic007G120000 Sobic002G117900--Sobic007G120000 Sobic003G080900 Sobic003G080900 Sobic002G117900--Sobic003G080900 Sobic005G024900 Sobic005G024900 Sobic002G117900--Sobic005G024900 Sobic009G084300 Sobic009G084300 Sobic002G117900--Sobic009G084300 Sobic007G021200 Sobic007G021200 Sobic002G117900--Sobic007G021200 Sobic007G196300 Sobic007G196300 Sobic002G117900--Sobic007G196300 Sobic003G106300 Sobic003G106300 Sobic002G117900--Sobic003G106300 Sobic002G155400 Sobic002G155400 Sobic002G117900--Sobic002G155400 Sobic003G440900--Sobic002G117900 Sobic003G440900--Sobic005G024900 Sobic002G422500 Sobic002G422500 Sobic003G440900--Sobic002G422500 Sobic003G440900--Sobic007G196300 Sobic004G173600 Sobic004G173600 Sobic003G440900--Sobic004G173600 Sobic002G087800 Sobic002G087800 Sobic003G440900--Sobic002G087800 Sobic010G193900 Sobic010G193900 Sobic003G440900--Sobic010G193900 Sobic006G247100 Sobic006G247100 Sobic003G440900--Sobic006G247100 Sobic007G136100 Sobic007G136100 Sobic003G440900--Sobic007G136100 Sobic001G218500 Sobic001G218500 Sobic007G120000--Sobic001G218500 Sobic003G020500 Sobic003G020500 Sobic007G120000--Sobic003G020500 Sobic001G326400 Sobic001G326400 Sobic007G120000--Sobic001G326400 Sobic007G120000--Sobic009G084300 Sobic005G075600 Sobic005G075600 Sobic007G120000--Sobic005G075600 Sobic007G120000--Sobic003G106300 Sobic003G017601 Sobic003G017601 Sobic007G120000--Sobic003G017601 Sobic001G067800 Sobic001G067800 Sobic007G120000--Sobic001G067800 Sobic005G134600 Sobic005G134600 Sobic007G120000--Sobic005G134600 Sobic003G080900--Sobic002G117900 Sobic003G080900--Sobic009G084300 Sobic003G229200 Sobic003G229200 Sobic003G080900--Sobic003G229200 Sobic003G080900--Sobic007G120000 Sobic009G161401 Sobic009G161401 Sobic003G080900--Sobic009G161401 Sobic003G080900--Sobic002G155400 Sobic003G273700 Sobic003G273700 Sobic003G080900--Sobic003G273700 Sobic004G106900 Sobic004G106900 Sobic003G080900--Sobic004G106900 Sobic003G080900--Sobic007G196300 Sobic005G024900--Sobic002G087800 Sobic001G132000 Sobic001G132000 Sobic005G024900--Sobic001G132000 Sobic003G061400 Sobic003G061400 Sobic005G024900--Sobic003G061400 Sobic005G024900--Sobic003G440900 Sobic003G241500 Sobic003G241500 Sobic005G024900--Sobic003G241500 Sobic004G333200 Sobic004G333200 Sobic005G024900--Sobic004G333200 Sobic006G244400 Sobic006G244400 Sobic005G024900--Sobic006G244400 Sobic005G152200 Sobic005G152200 Sobic005G024900--Sobic005G152200 Sobic006G127100 Sobic006G127100 Sobic005G024900--Sobic006G127100 Sobic009G084300--Sobic007G120000 Sobic009G084300--Sobic001G218500 Sobic010G001300 Sobic010G001300 Sobic009G084300--Sobic010G001300 Sobic001G302500 Sobic001G302500 Sobic009G084300--Sobic001G302500 Sobic009G084300--Sobic003G020500 Sobic006G230300 Sobic006G230300 Sobic009G084300--Sobic006G230300 Sobic010G128700 Sobic010G128700 Sobic009G084300--Sobic010G128700 Sobic001G216500 Sobic001G216500 Sobic009G084300--Sobic001G216500 Sobic001G299100 Sobic001G299100 Sobic009G084300--Sobic001G299100 Sobic005G100800 Sobic005G100800 Sobic007G021200--Sobic005G100800 Sobic007G021200--Sobic003G106300 Sobic007G193200 Sobic007G193200 Sobic007G021200--Sobic007G193200 Sobic005G110541 Sobic005G110541 Sobic007G021200--Sobic005G110541 Sobic001G353200 Sobic001G353200 Sobic007G021200--Sobic001G353200 Sobic007G021100 Sobic007G021100 Sobic007G021200--Sobic007G021100 Sobic004G161900 Sobic004G161900 Sobic007G021200--Sobic004G161900 Sobic004G153100 Sobic004G153100 Sobic007G021200--Sobic004G153100 Sobic004G261500 Sobic004G261500 Sobic007G021200--Sobic004G261500 Sobic002G283900 Sobic002G283900 Sobic007G196300--Sobic002G283900 Sobic007G196300--Sobic005G024900 Sobic007G196300--Sobic003G440900 Sobic007G196300--Sobic004G173600 Sobic007G196300--Sobic003G080900 Sobic003G388300 Sobic003G388300 Sobic007G196300--Sobic003G388300 Sobic007G196300--Sobic007G120000 Sobic007G196300--Sobic003G106300 Sobic007G196300--Sobic005G152200 Sobic003G106300--Sobic007G120000 Sobic003G106300--Sobic001G218500 Sobic007G214500 Sobic007G214500 Sobic003G106300--Sobic007G214500 Sobic003G106300--Sobic003G020500 Sobic003G106300--Sobic007G021200 Sobic003G106300--Sobic007G193200 Sobic003G106300--Sobic005G075600 Sobic003G079100 Sobic003G079100 Sobic003G106300--Sobic003G079100 Sobic003G106300--Sobic009G084300 Sobic001G386400 Sobic001G386400 Sobic002G155400--Sobic001G386400 Sobic002G155400--Sobic009G161401 Sobic006G119200 Sobic006G119200 Sobic002G155400--Sobic006G119200 Sobic008G044000 Sobic008G044000 Sobic002G155400--Sobic008G044000 Sobic002G322900 Sobic002G322900 Sobic002G155400--Sobic002G322900 Sobic010G206000 Sobic010G206000 Sobic002G155400--Sobic010G206000 Sobic001G512800 Sobic001G512800 Sobic002G155400--Sobic001G512800 Sobic004G341200 Sobic004G341200 Sobic002G155400--Sobic004G341200 Sobic002G155400--Sobic004G106900
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.