Gene annotation
Transcriptome id Sobic.007G021200.1
Synonym
Functional annotation carrier, putative, expressed
UniProt A0A1B6PF36
Pfam PF03087
Panther DB PTHR33070 PTHR33070:SF12
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G17080 : Arabidopsis protein of unknown function (DUF241)
RAP-DB (Rice) LOC_Os08g43980.1 : carrier, putative, expressed
MaizeGDB (Corn) Zm00025a030228 , Zm00025a030229 , Zm00025a030227 , Zm00025a005660 , Zm00025a005657 , Zm00025a005656 , Zm00025a030230
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G100800 initiation factor 2 subunit family domain containing protein, expressed K08963: methylthioribose-1-phosphate isomerase
2 Sobic.003G106300 3-beta-hydroxysteroid-Delta-isomerase, putative, expressed K01824: cholestenol Delta-isomerase
3 Sobic.007G193200 MTA/SAH nucleosidase, putative, expressed K01244: 5'-methylthioadenosine nucleosidase
4 Sobic.005G110541 - K16054: methylthioribulose 1-phosphate dehydratase / enolase-phosphatase E1
5 Sobic.001G353200 ctr copper transporter family protein, putative, expressed K14686: SLC31A1, solute carrier family 31 (copper transporter), member 1
6 Sobic.007G021100 carrier, putative, expressed -
7 Sobic.004G161900 AMP-binding enzyme, putative, expressed K01895: ACSS1_2, acetyl-CoA synthetase
8 Sobic.004G153100 disease resistance protein, putative, expressed -
9 Sobic.004G261500 phosphoribosyl transferase, putative, expressed -
10 Sobic.007G214500 sucrose transporters(PubMedID : 23805151)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Sugar transporter(PubMedID : 27330561)@sucrose transporter BoSUT1, putative, expressed K15378: solute carrier family 45, member 1/2/4
11 Sobic.005G205400 - -
12 Sobic.003G020500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GDSL-like lipase/acylhydrolase, putative, expressed -
13 Sobic.007G120000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ABC transporter, ATP-binding protein, putative, expressed -
14 Sobic.007G140000 wall-associated receptor kinase-like 22 precursor, putative, expressed -
15 Sobic.001G243150 - -
16 Sobic.002G392000 peroxidase precursor, putative, expressed K00430: peroxidase
17 Sobic.003G099000 helix-loop-helix DNA-binding domain containing protein, expressed -
18 Sobic.001G348400 expressed protein -
19 Sobic.008G109400 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed -
20 Sobic.009G055300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase


Gene co-expression network
sample Sobic007G021200 Sobic007G021200 Sobic005G100800 Sobic005G100800 Sobic007G021200--Sobic005G100800 Sobic003G106300 Sobic003G106300 Sobic007G021200--Sobic003G106300 Sobic007G193200 Sobic007G193200 Sobic007G021200--Sobic007G193200 Sobic005G110541 Sobic005G110541 Sobic007G021200--Sobic005G110541 Sobic001G353200 Sobic001G353200 Sobic007G021200--Sobic001G353200 Sobic007G021100 Sobic007G021100 Sobic007G021200--Sobic007G021100 Sobic004G161900 Sobic004G161900 Sobic007G021200--Sobic004G161900 Sobic004G153100 Sobic004G153100 Sobic007G021200--Sobic004G153100 Sobic004G261500 Sobic004G261500 Sobic007G021200--Sobic004G261500 Sobic005G100800--Sobic007G193200 Sobic005G100800--Sobic005G110541 Sobic005G100800--Sobic004G261500 Sobic008G109400 Sobic008G109400 Sobic005G100800--Sobic008G109400 Sobic001G271300 Sobic001G271300 Sobic005G100800--Sobic001G271300 Sobic001G395900 Sobic001G395900 Sobic005G100800--Sobic001G395900 Sobic003G154500 Sobic003G154500 Sobic005G100800--Sobic003G154500 Sobic006G230200 Sobic006G230200 Sobic005G100800--Sobic006G230200 Sobic002G041100 Sobic002G041100 Sobic005G100800--Sobic002G041100 Sobic007G120000 Sobic007G120000 Sobic003G106300--Sobic007G120000 Sobic001G218500 Sobic001G218500 Sobic003G106300--Sobic001G218500 Sobic007G214500 Sobic007G214500 Sobic003G106300--Sobic007G214500 Sobic003G020500 Sobic003G020500 Sobic003G106300--Sobic003G020500 Sobic003G106300--Sobic007G021200 Sobic003G106300--Sobic007G193200 Sobic005G075600 Sobic005G075600 Sobic003G106300--Sobic005G075600 Sobic003G079100 Sobic003G079100 Sobic003G106300--Sobic003G079100 Sobic009G084300 Sobic009G084300 Sobic003G106300--Sobic009G084300 Sobic007G193200--Sobic004G261500 Sobic004G079900 Sobic004G079900 Sobic007G193200--Sobic004G079900 Sobic001G181600 Sobic001G181600 Sobic007G193200--Sobic001G181600 Sobic007G193200--Sobic003G154500 Sobic001G218400 Sobic001G218400 Sobic007G193200--Sobic001G218400 Sobic005G033000 Sobic005G033000 Sobic007G193200--Sobic005G033000 Sobic001G454900 Sobic001G454900 Sobic007G193200--Sobic001G454900 Sobic005G119900 Sobic005G119900 Sobic007G193200--Sobic005G119900 Sobic003G441800 Sobic003G441800 Sobic007G193200--Sobic003G441800 Sobic005G110541--Sobic005G100800 Sobic005G110541--Sobic007G193200 Sobic005G110541--Sobic001G353200 Sobic010G187500 Sobic010G187500 Sobic005G110541--Sobic010G187500 Sobic005G110541--Sobic004G261500 Sobic001G443100 Sobic001G443100 Sobic005G110541--Sobic001G443100 Sobic007G212000 Sobic007G212000 Sobic005G110541--Sobic007G212000 Sobic001G243100 Sobic001G243100 Sobic005G110541--Sobic001G243100 Sobic004G299500 Sobic004G299500 Sobic005G110541--Sobic004G299500 Sobic001G353200--Sobic007G193200 Sobic001G243150 Sobic001G243150 Sobic001G353200--Sobic001G243150 Sobic005G046400 Sobic005G046400 Sobic001G353200--Sobic005G046400 Sobic009G065700 Sobic009G065700 Sobic001G353200--Sobic009G065700 Sobic002G111900 Sobic002G111900 Sobic001G353200--Sobic002G111900 Sobic010G191600 Sobic010G191600 Sobic001G353200--Sobic010G191600 Sobic009G225800 Sobic009G225800 Sobic001G353200--Sobic009G225800 Sobic001G353200--Sobic003G441800 Sobic002G289500 Sobic002G289500 Sobic001G353200--Sobic002G289500 Sobic007G021100--Sobic008G109400 Sobic007G021100--Sobic004G299500 Sobic007G021100--Sobic001G395900 Sobic007G202480 Sobic007G202480 Sobic007G021100--Sobic007G202480 Sobic001G153100 Sobic001G153100 Sobic007G021100--Sobic001G153100 Sobic006G229901 Sobic006G229901 Sobic007G021100--Sobic006G229901 Sobic001G415100 Sobic001G415100 Sobic007G021100--Sobic001G415100 Sobic006G230100 Sobic006G230100 Sobic007G021100--Sobic006G230100 Sobic007G021100--Sobic006G230200 Sobic003G368000 Sobic003G368000 Sobic004G161900--Sobic003G368000 Sobic003G017601 Sobic003G017601 Sobic004G161900--Sobic003G017601 Sobic010G045400 Sobic010G045400 Sobic004G161900--Sobic010G045400 Sobic008G037900 Sobic008G037900 Sobic004G161900--Sobic008G037900 Sobic001G460400 Sobic001G460400 Sobic004G161900--Sobic001G460400 Sobic004G161900--Sobic001G218500 Sobic004G161900--Sobic003G079100 Sobic002G383900 Sobic002G383900 Sobic004G161900--Sobic002G383900 Sobic004G161900--Sobic003G020500 Sobic004G153100--Sobic005G075600 Sobic004G153100--Sobic003G106300 Sobic004G153100--Sobic003G020500 Sobic004G153100--Sobic007G120000 Sobic004G153100--Sobic007G021200 Sobic005G069332 Sobic005G069332 Sobic004G153100--Sobic005G069332 Sobic004G153100--Sobic004G261500 Sobic004G153100--Sobic004G299500 Sobic004G153100--Sobic007G193200 Sobic004G261500--Sobic001G395900 Sobic005G101000 Sobic005G101000 Sobic004G261500--Sobic005G101000 Sobic004G261500--Sobic006G230100 Sobic004G261500--Sobic004G299500 Sobic008G058600 Sobic008G058600 Sobic004G261500--Sobic008G058600 Sobic004G261500--Sobic007G202480 Sobic004G261500--Sobic006G230200 Sobic004G261500--Sobic001G153100 Sobic004G261500--Sobic003G154500
Octagon: transcription factors


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