Gene annotation
Transcriptome id Sobic.007G021100.1
Synonym
Functional annotation carrier, putative, expressed
UniProt A0A1B6PF22
Pfam PF03087
Panther DB PTHR33070 PTHR33070:SF12
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G17080 : Arabidopsis protein of unknown function (DUF241)
RAP-DB (Rice) LOC_Os08g43980.1 : carrier, putative, expressed
MaizeGDB (Corn) Zm00025a030226 , Zm00025a005660 , Zm00025a005656
Brachypodium KQJ99310
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G109400 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed -
2 Sobic.004G299500 - -
3 Sobic.001G395900 Nicotianamine synthase 4("PubMedID : 26759170,PubMedID : 24597475")@nicotianamine synthase, putative, expressed K05953: nicotianamine synthase
4 Sobic.007G202480 - -
5 Sobic.001G153100 sulfate transporter, putative, expressed K17470: sulfate transporter 1, high-affinity
6 Sobic.006G229901 - -
7 Sobic.001G415100 terpene synthase, putative, expressed -
8 Sobic.006G230100 TKL_IRAK_DUF26-ld.1 - DUF26 kinases have homology to DUF26 containing loci, expressed -
9 Sobic.006G230200 TKL_IRAK_DUF26-ld.1 - DUF26 kinases have homology to DUF26 containing loci, expressed -
10 Sobic.005G069166 - -
11 Sobic.009G055300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
12 Sobic.005G069332 - -
13 Sobic.002G063700 NB-ARC domain containing protein, expressed -
14 Sobic.005G100800 initiation factor 2 subunit family domain containing protein, expressed K08963: methylthioribose-1-phosphate isomerase
15 Sobic.005G101000 - -
16 Sobic.007G015000 methyltransferase domain containing protein, expressed -
17 Sobic.008G058600 protein kinase family protein, putative, expressed -
18 Sobic.005G205400 - -
19 Sobic.005G176600 aspartic proteinase nepenthesin-2 precursor, putative, expressed -
20 Sobic.003G045650 - -


Gene co-expression network
sample Sobic007G021100 Sobic007G021100 Sobic008G109400 Sobic008G109400 Sobic007G021100--Sobic008G109400 Sobic004G299500 Sobic004G299500 Sobic007G021100--Sobic004G299500 Sobic001G395900 Sobic001G395900 Sobic007G021100--Sobic001G395900 Sobic007G202480 Sobic007G202480 Sobic007G021100--Sobic007G202480 Sobic001G153100 Sobic001G153100 Sobic007G021100--Sobic001G153100 Sobic006G229901 Sobic006G229901 Sobic007G021100--Sobic006G229901 Sobic001G415100 Sobic001G415100 Sobic007G021100--Sobic001G415100 Sobic006G230100 Sobic006G230100 Sobic007G021100--Sobic006G230100 Sobic006G230200 Sobic006G230200 Sobic007G021100--Sobic006G230200 Sobic008G109400--Sobic001G153100 Sobic008G109400--Sobic001G415100 Sobic002G289500 Sobic002G289500 Sobic008G109400--Sobic002G289500 Sobic008G109400--Sobic006G230200 Sobic008G109400--Sobic001G395900 Sobic008G109400--Sobic007G202480 Sobic008G109400--Sobic004G299500 Sobic009G055300 Sobic009G055300 Sobic008G109400--Sobic009G055300 Sobic002G063700 Sobic002G063700 Sobic008G109400--Sobic002G063700 Sobic004G299500--Sobic006G230100 Sobic004G299500--Sobic001G395900 Sobic004G299500--Sobic007G202480 Sobic005G069166 Sobic005G069166 Sobic004G299500--Sobic005G069166 Sobic004G299500--Sobic006G229901 Sobic007G015000 Sobic007G015000 Sobic004G299500--Sobic007G015000 Sobic005G069332 Sobic005G069332 Sobic004G299500--Sobic005G069332 Sobic004G299500--Sobic001G153100 Sobic008G058600 Sobic008G058600 Sobic004G299500--Sobic008G058600 Sobic001G395900--Sobic007G202480 Sobic001G395900--Sobic004G299500 Sobic005G101000 Sobic005G101000 Sobic001G395900--Sobic005G101000 Sobic001G395900--Sobic006G230100 Sobic001G395900--Sobic006G230200 Sobic001G395900--Sobic008G058600 Sobic001G395900--Sobic006G229901 Sobic004G261500 Sobic004G261500 Sobic001G395900--Sobic004G261500 Sobic001G395900--Sobic005G069166 Sobic007G202480--Sobic001G395900 Sobic007G202480--Sobic006G229901 Sobic007G202480--Sobic004G299500 Sobic007G202480--Sobic006G230100 Sobic007G202480--Sobic005G069166 Sobic007G202480--Sobic001G153100 Sobic007G202480--Sobic006G230200 Sobic007G202480--Sobic005G069332 Sobic008G105800 Sobic008G105800 Sobic007G202480--Sobic008G105800 Sobic001G153100--Sobic007G202480 Sobic001G153100--Sobic005G069166 Sobic001G153100--Sobic006G230100 Sobic001G153100--Sobic004G299500 Sobic001G153100--Sobic006G229901 Sobic001G153100--Sobic002G063700 Sobic001G153100--Sobic001G395900 Sobic001G153100--Sobic001G415100 Sobic001G153100--Sobic002G289500 Sobic006G229901--Sobic007G202480 Sobic006G229901--Sobic004G299500 Sobic003G045650 Sobic003G045650 Sobic006G229901--Sobic003G045650 Sobic006G229901--Sobic001G395900 Sobic006G229901--Sobic006G230100 Sobic006G229901--Sobic001G153100 Sobic006G229901--Sobic005G069166 Sobic006G229901--Sobic008G058600 Sobic006G229901--Sobic005G069332 Sobic001G415100--Sobic007G015000 Sobic001G415100--Sobic002G289500 Sobic001G415100--Sobic006G230100 Sobic001G415100--Sobic009G055300 Sobic001G415100--Sobic002G063700 Sobic001G415100--Sobic004G299500 Sobic005G182900 Sobic005G182900 Sobic001G415100--Sobic005G182900 Sobic001G415100--Sobic001G153100 Sobic005G097900 Sobic005G097900 Sobic001G415100--Sobic005G097900 Sobic006G230100--Sobic004G299500 Sobic006G230100--Sobic001G395900 Sobic006G230100--Sobic007G202480 Sobic006G230100--Sobic007G015000 Sobic006G230100--Sobic005G069166 Sobic006G230100--Sobic009G055300 Sobic006G230100--Sobic006G230200 Sobic006G230100--Sobic001G153100 Sobic006G230100--Sobic006G229901 Sobic006G230200--Sobic009G055300 Sobic006G230200--Sobic001G395900 Sobic006G230200--Sobic006G230100 Sobic006G230200--Sobic007G202480 Sobic006G230200--Sobic004G299500 Sobic006G230200--Sobic005G069332 Sobic006G230200--Sobic008G105800 Sobic006G230200--Sobic001G153100 Sobic006G230200--Sobic005G069166
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.