Gene annotation
Transcriptome id Sobic.004G161900.1
Synonym Sb04g021370, ACS
Functional annotation AMP-binding enzyme, putative, expressed
UniProt C5XTB7
Pfam PF16177 PF13193 PF00501
Panther DB PTHR24095 PTHR24095:SF157
NCBI CDD -
KEGG Orthology K01895; ACSS1_2, acetyl-CoA synthetase
Gene Ontology GO:0008152; metabolic process GO:0003824catalytic activity


Orthologs (automatic annotation)
TAIR AT5G36880 : acetyl-CoA synthetase
RAP-DB (Rice) LOC_Os02g32490.1 : AMP-binding enzyme, putative, expressed
MaizeGDB (Corn) Zm00025a020504 , Zm00025a011588
Brachypodium KQJ99673 , KQJ82427
Barley HORVU2Hr1G071960.4 , HORVU2Hr1G071960.6 , HORVU2Hr1G071960.3 , HORVU2Hr1G071960.2 , HORVU2Hr1G071960.1 , HORVU2Hr1G071960.9 , HORVU6Hr1G090810.2 , HORVU6Hr1G090810.3 , HORVU6Hr1G090810.1 , HORVU2Hr1G071960.14 , HORVU2Hr1G071960.13 , HORVU2Hr1G071960.12 , HORVU2Hr1G071960.11 , HORVU2Hr1G071960.10 , HORVU6Hr1G090960.2 , HORVU6Hr1G090960.3 , HORVU6Hr1G090960.1
Wheat TraesCS6B02G431000 , TraesCS6B02G431000 , TraesCS2D02G288800 , TraesCS6A02G390600 , TraesCS6A02G390600 , TraesCS2D02G288800 , TraesCS2B02G307300 , TraesCS6D02G376900 , TraesCS6D02G376900 , TraesCS2A02G290900 , TraesCS2A02G290900 , TraesCS2A02G290900
Populus -


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cDNA sequences
Sobic.004G161900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G368000 OsFBT3 - F-box and tubby domain containing protein, expressed -
2 Sobic.003G017601 - -
3 Sobic.010G045400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@AMP-binding enzyme, putative, expressed K01897: ACSL, long-chain acyl-CoA synthetase
4 Sobic.008G037900 transcription factor, putative, expressed K14431: transcription factor TGA
5 Sobic.001G460400 expressed protein -
6 Sobic.001G218500 MATH domain containing protein, expressed -
7 Sobic.003G079100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@muconate cycloisomerase, putative, expressed -
8 Sobic.002G383900 sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase
9 Sobic.003G020500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GDSL-like lipase/acylhydrolase, putative, expressed -
10 Sobic.001G067800 metal cation transporter, putative, expressed K07238: TC.ZIP, zupT, ZRT3, zinc transporter, ZIP family
11 Sobic.005G134600 natural resistance-associated macrophage protein, putative, expressed K12347: SLC11A1, natural resistance-associated macrophage protein 1
12 Sobic.009G079900 endoglucanase precursor, putative, expressed -
13 Sobic.004G261500 phosphoribosyl transferase, putative, expressed -
14 Sobic.002G111900 receptor-like kinase, putative, expressed -
15 Sobic.005G175900 expressed protein -
16 Sobic.007G220400 receptor-like protein kinase 2 precursor, putative, expressed -
17 Sobic.004G014600 disease resistance protein RGA2, putative, expressed -
18 Sobic.010G213600 histidine kinase, putative, expressed -
19 Sobic.005G226350 - -
20 Sobic.010G191700 cytochrome P450, putative, expressed -


Gene co-expression network
sample Sobic004G161900 Sobic004G161900 Sobic003G368000 Sobic003G368000 Sobic004G161900--Sobic003G368000 Sobic003G017601 Sobic003G017601 Sobic004G161900--Sobic003G017601 Sobic010G045400 Sobic010G045400 Sobic004G161900--Sobic010G045400 Sobic008G037900 Sobic008G037900 Sobic004G161900--Sobic008G037900 Sobic001G460400 Sobic001G460400 Sobic004G161900--Sobic001G460400 Sobic001G218500 Sobic001G218500 Sobic004G161900--Sobic001G218500 Sobic003G079100 Sobic003G079100 Sobic004G161900--Sobic003G079100 Sobic002G383900 Sobic002G383900 Sobic004G161900--Sobic002G383900 Sobic003G020500 Sobic003G020500 Sobic004G161900--Sobic003G020500 Sobic003G368000--Sobic004G161900 Sobic003G368000--Sobic008G037900 Sobic003G099000 Sobic003G099000 Sobic003G368000--Sobic003G099000 Sobic003G368000--Sobic010G045400 Sobic003G368000--Sobic003G017601 Sobic010G097200 Sobic010G097200 Sobic003G368000--Sobic010G097200 Sobic010G191700 Sobic010G191700 Sobic003G368000--Sobic010G191700 Sobic003G368000--Sobic003G079100 Sobic002G391400 Sobic002G391400 Sobic003G368000--Sobic002G391400 Sobic003G017601--Sobic001G218500 Sobic001G342000 Sobic001G342000 Sobic003G017601--Sobic001G342000 Sobic002G183750 Sobic002G183750 Sobic003G017601--Sobic002G183750 Sobic002G111900 Sobic002G111900 Sobic003G017601--Sobic002G111900 Sobic003G017601--Sobic003G079100 Sobic010G213600 Sobic010G213600 Sobic003G017601--Sobic010G213600 Sobic003G017601--Sobic003G020500 Sobic005G223700 Sobic005G223700 Sobic003G017601--Sobic005G223700 Sobic005G175900 Sobic005G175900 Sobic003G017601--Sobic005G175900 Sobic010G045400--Sobic008G037900 Sobic010G045400--Sobic003G017601 Sobic010G045400--Sobic003G368000 Sobic010G045400--Sobic004G161900 Sobic006G230300 Sobic006G230300 Sobic010G045400--Sobic006G230300 Sobic001G299100 Sobic001G299100 Sobic010G045400--Sobic001G299100 Sobic008G191400 Sobic008G191400 Sobic010G045400--Sobic008G191400 Sobic010G045400--Sobic001G218500 Sobic010G045400--Sobic010G213600 Sobic008G037900--Sobic010G097200 Sobic007G220400 Sobic007G220400 Sobic008G037900--Sobic007G220400 Sobic006G205700 Sobic006G205700 Sobic008G037900--Sobic006G205700 Sobic008G037900--Sobic002G111900 Sobic010G241900 Sobic010G241900 Sobic008G037900--Sobic010G241900 Sobic009G065700 Sobic009G065700 Sobic008G037900--Sobic009G065700 Sobic003G441800 Sobic003G441800 Sobic008G037900--Sobic003G441800 Sobic003G167300 Sobic003G167300 Sobic008G037900--Sobic003G167300 Sobic008G037900--Sobic002G391400 Sobic001G360700 Sobic001G360700 Sobic001G460400--Sobic001G360700 Sobic001G067800 Sobic001G067800 Sobic001G460400--Sobic001G067800 Sobic001G460400--Sobic004G161900 Sobic001G460400--Sobic003G017601 Sobic002G207200 Sobic002G207200 Sobic001G460400--Sobic002G207200 Sobic001G227850 Sobic001G227850 Sobic001G460400--Sobic001G227850 Sobic009G246700 Sobic009G246700 Sobic001G460400--Sobic009G246700 Sobic001G460400--Sobic008G037900 Sobic010G218300 Sobic010G218300 Sobic001G460400--Sobic010G218300 Sobic001G218500--Sobic003G020500 Sobic004G014600 Sobic004G014600 Sobic001G218500--Sobic004G014600 Sobic001G218500--Sobic003G079100 Sobic001G218500--Sobic001G342000 Sobic001G218500--Sobic002G111900 Sobic009G165100 Sobic009G165100 Sobic001G218500--Sobic009G165100 Sobic002G029600 Sobic002G029600 Sobic001G218500--Sobic002G029600 Sobic001G218500--Sobic003G017601 Sobic003G441601 Sobic003G441601 Sobic001G218500--Sobic003G441601 Sobic003G079100--Sobic002G029600 Sobic003G079100--Sobic004G014600 Sobic005G065700 Sobic005G065700 Sobic003G079100--Sobic005G065700 Sobic002G029500 Sobic002G029500 Sobic003G079100--Sobic002G029500 Sobic005G182800 Sobic005G182800 Sobic003G079100--Sobic005G182800 Sobic003G079100--Sobic010G213600 Sobic005G182900 Sobic005G182900 Sobic003G079100--Sobic005G182900 Sobic010G152500 Sobic010G152500 Sobic003G079100--Sobic010G152500 Sobic005G071900 Sobic005G071900 Sobic003G079100--Sobic005G071900 Sobic002G383900--Sobic004G161900 Sobic001G263900 Sobic001G263900 Sobic002G383900--Sobic001G263900 Sobic007G020700 Sobic007G020700 Sobic002G383900--Sobic007G020700 Sobic005G022500 Sobic005G022500 Sobic002G383900--Sobic005G022500 Sobic005G219700 Sobic005G219700 Sobic002G383900--Sobic005G219700 Sobic007G106500 Sobic007G106500 Sobic002G383900--Sobic007G106500 Sobic001G365200 Sobic001G365200 Sobic002G383900--Sobic001G365200 Sobic002G207000 Sobic002G207000 Sobic002G383900--Sobic002G207000 Sobic001G314000 Sobic001G314000 Sobic002G383900--Sobic001G314000 Sobic003G020500--Sobic001G218500 Sobic003G020500--Sobic002G111900 Sobic003G020500--Sobic003G079100 Sobic002G391300 Sobic002G391300 Sobic003G020500--Sobic002G391300 Sobic003G020500--Sobic003G441601 Sobic003G020500--Sobic004G014600 Sobic002G289500 Sobic002G289500 Sobic003G020500--Sobic002G289500 Sobic006G171100 Sobic006G171100 Sobic003G020500--Sobic006G171100 Sobic003G020500--Sobic002G029500
Octagon: transcription factors


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