Gene annotation
Transcriptome id Sobic.001G243150.1
Synonym -
Functional annotation -
UniProt A0A1Z5S751
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G059800 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
2 Sobic.005G101000 - -
3 Sobic.001G395900 Nicotianamine synthase 4("PubMedID : 26759170,PubMedID : 24597475")@nicotianamine synthase, putative, expressed K05953: nicotianamine synthase
4 Sobic.009G065700 - -
5 Sobic.004G261500 phosphoribosyl transferase, putative, expressed -
6 Sobic.006G230200 TKL_IRAK_DUF26-ld.1 - DUF26 kinases have homology to DUF26 containing loci, expressed -
7 Sobic.002G111900 receptor-like kinase, putative, expressed -
8 Sobic.006G230100 TKL_IRAK_DUF26-ld.1 - DUF26 kinases have homology to DUF26 containing loci, expressed -
9 Sobic.006G047200 helix-loop-helix DNA-binding domain containing protein, expressed -
10 Sobic.005G035900 PAN domain-containing protein At5g03700 precursor, putative, expressed -
11 Sobic.010G191600 cytochrome P450, putative, expressed -
12 Sobic.009G055300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.002G082000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@kelch repeat protein, putative, expressed -
14 Sobic.003G154500 helix-loop-helix DNA-binding domain containing protein, expressed -
15 Sobic.001G234100 expressed protein -
16 Sobic.001G353200 ctr copper transporter family protein, putative, expressed K14686: SLC31A1, solute carrier family 31 (copper transporter), member 1
17 Sobic.002G392000 peroxidase precursor, putative, expressed K00430: peroxidase
18 Sobic.008G058600 protein kinase family protein, putative, expressed -
19 Sobic.007G202480 - -
20 Sobic.004G299500 - -


Gene co-expression network
sample Sobic001G243150 Sobic001G243150 Sobic006G059800 Sobic006G059800 Sobic001G243150--Sobic006G059800 Sobic005G101000 Sobic005G101000 Sobic001G243150--Sobic005G101000 Sobic001G395900 Sobic001G395900 Sobic001G243150--Sobic001G395900 Sobic009G065700 Sobic009G065700 Sobic001G243150--Sobic009G065700 Sobic004G261500 Sobic004G261500 Sobic001G243150--Sobic004G261500 Sobic006G230200 Sobic006G230200 Sobic001G243150--Sobic006G230200 Sobic002G111900 Sobic002G111900 Sobic001G243150--Sobic002G111900 Sobic006G230100 Sobic006G230100 Sobic001G243150--Sobic006G230100 Sobic006G047200 Sobic006G047200 Sobic001G243150--Sobic006G047200 Sobic006G059800--Sobic002G111900 Sobic006G059800--Sobic006G047200 Sobic005G035900 Sobic005G035900 Sobic006G059800--Sobic005G035900 Sobic002G391300 Sobic002G391300 Sobic006G059800--Sobic002G391300 Sobic002G392000 Sobic002G392000 Sobic006G059800--Sobic002G392000 Sobic010G010000 Sobic010G010000 Sobic006G059800--Sobic010G010000 Sobic010G191700 Sobic010G191700 Sobic006G059800--Sobic010G191700 Sobic006G171100 Sobic006G171100 Sobic006G059800--Sobic006G171100 Sobic010G241900 Sobic010G241900 Sobic006G059800--Sobic010G241900 Sobic001G234100 Sobic001G234100 Sobic005G101000--Sobic001G234100 Sobic005G101000--Sobic001G395900 Sobic008G058600 Sobic008G058600 Sobic005G101000--Sobic008G058600 Sobic008G084800 Sobic008G084800 Sobic005G101000--Sobic008G084800 Sobic005G101000--Sobic006G047200 Sobic005G212800 Sobic005G212800 Sobic005G101000--Sobic005G212800 Sobic005G205400 Sobic005G205400 Sobic005G101000--Sobic005G205400 Sobic004G299500 Sobic004G299500 Sobic005G101000--Sobic004G299500 Sobic007G202480 Sobic007G202480 Sobic005G101000--Sobic007G202480 Sobic001G395900--Sobic007G202480 Sobic001G395900--Sobic004G299500 Sobic001G395900--Sobic005G101000 Sobic001G395900--Sobic006G230100 Sobic001G395900--Sobic006G230200 Sobic001G395900--Sobic008G058600 Sobic006G229901 Sobic006G229901 Sobic001G395900--Sobic006G229901 Sobic001G395900--Sobic004G261500 Sobic005G069166 Sobic005G069166 Sobic001G395900--Sobic005G069166 Sobic003G167300 Sobic003G167300 Sobic009G065700--Sobic003G167300 Sobic003G441800 Sobic003G441800 Sobic009G065700--Sobic003G441800 Sobic009G065700--Sobic002G111900 Sobic009G065700--Sobic010G010000 Sobic002G289500 Sobic002G289500 Sobic009G065700--Sobic002G289500 Sobic001G499900 Sobic001G499900 Sobic009G065700--Sobic001G499900 Sobic003G441601 Sobic003G441601 Sobic009G065700--Sobic003G441601 Sobic009G065700--Sobic010G241900 Sobic001G348400 Sobic001G348400 Sobic009G065700--Sobic001G348400 Sobic004G261500--Sobic001G395900 Sobic004G261500--Sobic005G101000 Sobic004G261500--Sobic006G230100 Sobic004G261500--Sobic004G299500 Sobic004G261500--Sobic008G058600 Sobic004G261500--Sobic007G202480 Sobic004G261500--Sobic006G230200 Sobic001G153100 Sobic001G153100 Sobic004G261500--Sobic001G153100 Sobic003G154500 Sobic003G154500 Sobic004G261500--Sobic003G154500 Sobic009G055300 Sobic009G055300 Sobic006G230200--Sobic009G055300 Sobic006G230200--Sobic001G395900 Sobic006G230200--Sobic006G230100 Sobic006G230200--Sobic007G202480 Sobic006G230200--Sobic004G299500 Sobic005G069332 Sobic005G069332 Sobic006G230200--Sobic005G069332 Sobic008G105800 Sobic008G105800 Sobic006G230200--Sobic008G105800 Sobic006G230200--Sobic001G153100 Sobic006G230200--Sobic005G069166 Sobic002G111900--Sobic010G191700 Sobic002G111900--Sobic002G391300 Sobic002G111900--Sobic003G441601 Sobic007G220400 Sobic007G220400 Sobic002G111900--Sobic007G220400 Sobic002G111900--Sobic010G241900 Sobic002G111900--Sobic010G010000 Sobic002G111900--Sobic006G171100 Sobic005G046400 Sobic005G046400 Sobic002G111900--Sobic005G046400 Sobic002G111900--Sobic006G059800 Sobic006G230100--Sobic004G299500 Sobic006G230100--Sobic001G395900 Sobic006G230100--Sobic007G202480 Sobic007G015000 Sobic007G015000 Sobic006G230100--Sobic007G015000 Sobic006G230100--Sobic005G069166 Sobic006G230100--Sobic009G055300 Sobic006G230100--Sobic006G230200 Sobic006G230100--Sobic001G153100 Sobic006G230100--Sobic006G229901 Sobic006G047200--Sobic005G035900 Sobic006G047200--Sobic005G205400 Sobic006G047200--Sobic008G084800 Sobic006G047200--Sobic002G392000 Sobic006G047200--Sobic001G234100 Sobic006G047200--Sobic005G101000 Sobic009G136800 Sobic009G136800 Sobic006G047200--Sobic009G136800 Sobic006G047200--Sobic010G241900 Sobic005G134200 Sobic005G134200 Sobic006G047200--Sobic005G134200
Octagon: transcription factors


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