Gene annotation
Transcriptome id Sobic.009G084300.1,Sobic.009G084300.2
Synonym Sb09g007440
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
phosphorylase domain containing protein, putative, expressed
UniProt C5YV55 , A0A1Z5R1J6
Pfam PF01048
Panther DB PTHR21234 PTHR21234:SF19
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0009116; nucleoside metabolic process GO:0003824catalytic activity


Orthologs (automatic annotation)
TAIR AT4G28940 : Phosphorylase superfamily protein
RAP-DB (Rice) LOC_Os05g13970.1 : phosphorylase domain containing protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G120000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ABC transporter, ATP-binding protein, putative, expressed -
2 Sobic.001G218500 MATH domain containing protein, expressed -
3 Sobic.010G001300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Protein transferase (At)(PubMedID : 27208977)@transferase family protein, putative, expressed -
4 Sobic.001G302500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@flavin-containing monooxygenase family protein, putative, expressed -
5 Sobic.003G020500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GDSL-like lipase/acylhydrolase, putative, expressed -
6 Sobic.006G230300 similar to LOC Os04g54190: cysteine-rich receptor-like protein kinase 8 precursor(PubMedID : 24655390)@similar to LOC.Os04g54190:cysteine-rich receptor-like protein kinase 8 precursor(PubMedID : 24655390)@cysteine-rich receptor-like protein kinase 8 precursor, putative, expressed K04733: interleukin-1 receptor-associated kinase 4
7 Sobic.010G128700 peroxidase precursor, putative, expressed K00430: peroxidase
8 Sobic.001G216500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@nodulin, putative, expressed K07192: flotillin
9 Sobic.001G299100 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
10 Sobic.004G312200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./middle senescence marker during developmental senescence(PubMedID : 27586543)@WRKY32, expressed -
11 Sobic.001G326400 cytochrome P450, putative, expressed -
12 Sobic.003G106300 3-beta-hydroxysteroid-Delta-isomerase, putative, expressed K01824: cholestenol Delta-isomerase
13 Sobic.001G416100 - -
14 Sobic.005G175900 expressed protein -
15 Sobic.002G283900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.007G126800 expressed protein -
17 Sobic.007G206800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lectin-like protein kinase, putative, expressed -
18 Sobic.008G191400 expressed protein -
19 Sobic.003G080900 Ser/Thr protein kinase, putative, expressed -
20 Sobic.002G068000 expressed protein -


Gene co-expression network
sample Sobic009G084300 Sobic009G084300 Sobic007G120000 Sobic007G120000 Sobic009G084300--Sobic007G120000 Sobic001G218500 Sobic001G218500 Sobic009G084300--Sobic001G218500 Sobic010G001300 Sobic010G001300 Sobic009G084300--Sobic010G001300 Sobic001G302500 Sobic001G302500 Sobic009G084300--Sobic001G302500 Sobic003G020500 Sobic003G020500 Sobic009G084300--Sobic003G020500 Sobic006G230300 Sobic006G230300 Sobic009G084300--Sobic006G230300 Sobic010G128700 Sobic010G128700 Sobic009G084300--Sobic010G128700 Sobic001G216500 Sobic001G216500 Sobic009G084300--Sobic001G216500 Sobic001G299100 Sobic001G299100 Sobic009G084300--Sobic001G299100 Sobic007G120000--Sobic001G218500 Sobic007G120000--Sobic003G020500 Sobic001G326400 Sobic001G326400 Sobic007G120000--Sobic001G326400 Sobic007G120000--Sobic009G084300 Sobic005G075600 Sobic005G075600 Sobic007G120000--Sobic005G075600 Sobic003G106300 Sobic003G106300 Sobic007G120000--Sobic003G106300 Sobic003G017601 Sobic003G017601 Sobic007G120000--Sobic003G017601 Sobic001G067800 Sobic001G067800 Sobic007G120000--Sobic001G067800 Sobic005G134600 Sobic005G134600 Sobic007G120000--Sobic005G134600 Sobic001G218500--Sobic003G020500 Sobic004G014600 Sobic004G014600 Sobic001G218500--Sobic004G014600 Sobic003G079100 Sobic003G079100 Sobic001G218500--Sobic003G079100 Sobic001G342000 Sobic001G342000 Sobic001G218500--Sobic001G342000 Sobic002G111900 Sobic002G111900 Sobic001G218500--Sobic002G111900 Sobic009G165100 Sobic009G165100 Sobic001G218500--Sobic009G165100 Sobic002G029600 Sobic002G029600 Sobic001G218500--Sobic002G029600 Sobic001G218500--Sobic003G017601 Sobic003G441601 Sobic003G441601 Sobic001G218500--Sobic003G441601 Sobic010G001300--Sobic001G218500 Sobic010G001300--Sobic004G014600 Sobic007G135100 Sobic007G135100 Sobic010G001300--Sobic007G135100 Sobic004G119800 Sobic004G119800 Sobic010G001300--Sobic004G119800 Sobic002G195600 Sobic002G195600 Sobic010G001300--Sobic002G195600 Sobic006G196400 Sobic006G196400 Sobic010G001300--Sobic006G196400 Sobic006G092700 Sobic006G092700 Sobic010G001300--Sobic006G092700 Sobic010G097200 Sobic010G097200 Sobic010G001300--Sobic010G097200 Sobic001G209300 Sobic001G209300 Sobic010G001300--Sobic001G209300 Sobic003G273700 Sobic003G273700 Sobic001G302500--Sobic003G273700 Sobic001G062500 Sobic001G062500 Sobic001G302500--Sobic001G062500 Sobic002G185800 Sobic002G185800 Sobic001G302500--Sobic002G185800 Sobic002G283900 Sobic002G283900 Sobic001G302500--Sobic002G283900 Sobic006G256900 Sobic006G256900 Sobic001G302500--Sobic006G256900 Sobic009G219200 Sobic009G219200 Sobic001G302500--Sobic009G219200 Sobic010G148800 Sobic010G148800 Sobic001G302500--Sobic010G148800 Sobic003G140700 Sobic003G140700 Sobic001G302500--Sobic003G140700 Sobic001G438200 Sobic001G438200 Sobic001G302500--Sobic001G438200 Sobic003G020500--Sobic001G218500 Sobic003G020500--Sobic002G111900 Sobic003G020500--Sobic003G079100 Sobic002G391300 Sobic002G391300 Sobic003G020500--Sobic002G391300 Sobic003G020500--Sobic003G441601 Sobic003G020500--Sobic004G014600 Sobic002G289500 Sobic002G289500 Sobic003G020500--Sobic002G289500 Sobic006G171100 Sobic006G171100 Sobic003G020500--Sobic006G171100 Sobic002G029500 Sobic002G029500 Sobic003G020500--Sobic002G029500 Sobic006G230300--Sobic001G299100 Sobic003G417100 Sobic003G417100 Sobic006G230300--Sobic003G417100 Sobic006G230300--Sobic006G092700 Sobic008G191400 Sobic008G191400 Sobic006G230300--Sobic008G191400 Sobic003G215200 Sobic003G215200 Sobic006G230300--Sobic003G215200 Sobic010G028100 Sobic010G028100 Sobic006G230300--Sobic010G028100 Sobic003G000100 Sobic003G000100 Sobic006G230300--Sobic003G000100 Sobic010G194100 Sobic010G194100 Sobic006G230300--Sobic010G194100 Sobic006G230300--Sobic003G017601 Sobic003G400900 Sobic003G400900 Sobic010G128700--Sobic003G400900 Sobic001G319300 Sobic001G319300 Sobic010G128700--Sobic001G319300 Sobic007G126800 Sobic007G126800 Sobic010G128700--Sobic007G126800 Sobic010G128400 Sobic010G128400 Sobic010G128700--Sobic010G128400 Sobic009G186500 Sobic009G186500 Sobic010G128700--Sobic009G186500 Sobic007G086300 Sobic007G086300 Sobic010G128700--Sobic007G086300 Sobic006G079300 Sobic006G079300 Sobic010G128700--Sobic006G079300 Sobic001G237800 Sobic001G237800 Sobic010G128700--Sobic001G237800 Sobic002G392100 Sobic002G392100 Sobic010G128700--Sobic002G392100 Sobic001G216500--Sobic002G392100 Sobic007G206800 Sobic007G206800 Sobic001G216500--Sobic007G206800 Sobic005G080600 Sobic005G080600 Sobic001G216500--Sobic005G080600 Sobic002G391400 Sobic002G391400 Sobic001G216500--Sobic002G391400 Sobic001G216500--Sobic001G319300 Sobic005G216700 Sobic005G216700 Sobic001G216500--Sobic005G216700 Sobic002G068000 Sobic002G068000 Sobic001G216500--Sobic002G068000 Sobic001G182200 Sobic001G182200 Sobic001G216500--Sobic001G182200 Sobic006G205700 Sobic006G205700 Sobic001G216500--Sobic006G205700 Sobic004G106100 Sobic004G106100 Sobic001G299100--Sobic004G106100 Sobic001G299100--Sobic006G092700 Sobic003G319400 Sobic003G319400 Sobic001G299100--Sobic003G319400 Sobic010G152400 Sobic010G152400 Sobic001G299100--Sobic010G152400 Sobic010G082000 Sobic010G082000 Sobic001G299100--Sobic010G082000 Sobic001G299100--Sobic003G000100 Sobic001G299100--Sobic008G191400 Sobic004G306900 Sobic004G306900 Sobic001G299100--Sobic004G306900 Sobic001G299100--Sobic007G086300
Octagon: transcription factors


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