Gene annotation
Transcriptome id Sobic.008G191400.1
Synonym Sb08g023160
Functional annotation expressed protein
UniProt C5YT19
Pfam PF07995
Panther DB PTHR19328 PTHR19328:SF36
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016901; oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor GO:0005975carbohydrate metabolic process


Orthologs (automatic annotation)
TAIR AT1G74790 : catalytics
RAP-DB (Rice) LOC_Os12g44230.1 : expressed protein
MaizeGDB (Corn) Zm00025a025063
Brachypodium KQJ85587
Barley -
Wheat TraesCS5D02G004800 , TraesCS5A02G003800 , TraesCS5A02G003800
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G299100 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
2 Sobic.006G092700 MLO domain containing protein, putative, expressed K08472: mlo protein
3 Sobic.003G319400 receptor protein kinase, putative, expressed -
4 Sobic.006G135300 expressed protein -
5 Sobic.007G100700 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -
6 Sobic.003G426500 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
7 Sobic.004G306900 amino acid transporter, putative, expressed -
8 Sobic.009G181600 indole-3-acetate beta-glucosyltransferase, putative, expressed -
9 Sobic.010G082000 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
10 Sobic.003G182200 1-aminocyclopropane-1-carboxylate oxidase homolog 1, putative, expressed -
11 Sobic.010G152400 glycosyltransferase, putative, expressed -
12 Sobic.010G028100 GDP-mannose 4,6 dehydratase 2, putative, expressed K01711: gmd, GDPmannose 4,6-dehydratase
13 Sobic.003G000100 STIGL1 - Stigma-specific Stig1 family protein precursor, expressed -
14 Sobic.003G240400 leaf senescence related protein, putative, expressed -
15 Sobic.006G106900 "cell wall modification, deposition of casparian strips, endodermis, transmembrane"(PubMedID : 24920445)@membrane associated DUF588 domain containing protein, putative, expressed -
16 Sobic.002G195600 Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
17 Sobic.001G438200 expressed protein -
18 Sobic.008G034900 PAN domain-containing protein At5g03700 precursor, putative, expressed -
19 Sobic.007G073000 - -
20 Sobic.005G202300 integral membrane protein TIGR01569 containing protein, expressed -


Gene co-expression network
sample Sobic008G191400 Sobic008G191400 Sobic001G299100 Sobic001G299100 Sobic008G191400--Sobic001G299100 Sobic006G092700 Sobic006G092700 Sobic008G191400--Sobic006G092700 Sobic003G319400 Sobic003G319400 Sobic008G191400--Sobic003G319400 Sobic006G135300 Sobic006G135300 Sobic008G191400--Sobic006G135300 Sobic007G100700 Sobic007G100700 Sobic008G191400--Sobic007G100700 Sobic003G426500 Sobic003G426500 Sobic008G191400--Sobic003G426500 Sobic004G306900 Sobic004G306900 Sobic008G191400--Sobic004G306900 Sobic009G181600 Sobic009G181600 Sobic008G191400--Sobic009G181600 Sobic010G082000 Sobic010G082000 Sobic008G191400--Sobic010G082000 Sobic004G106100 Sobic004G106100 Sobic001G299100--Sobic004G106100 Sobic001G299100--Sobic006G092700 Sobic001G299100--Sobic003G319400 Sobic010G152400 Sobic010G152400 Sobic001G299100--Sobic010G152400 Sobic001G299100--Sobic010G082000 Sobic003G000100 Sobic003G000100 Sobic001G299100--Sobic003G000100 Sobic001G299100--Sobic008G191400 Sobic001G299100--Sobic004G306900 Sobic007G086300 Sobic007G086300 Sobic001G299100--Sobic007G086300 Sobic006G092700--Sobic006G135300 Sobic006G092700--Sobic010G082000 Sobic010G028100 Sobic010G028100 Sobic006G092700--Sobic010G028100 Sobic006G092700--Sobic003G000100 Sobic007G073000 Sobic007G073000 Sobic006G092700--Sobic007G073000 Sobic006G092700--Sobic010G152400 Sobic002G146000 Sobic002G146000 Sobic006G092700--Sobic002G146000 Sobic006G092700--Sobic004G306900 Sobic006G019700 Sobic006G019700 Sobic006G092700--Sobic006G019700 Sobic006G106900 Sobic006G106900 Sobic003G319400--Sobic006G106900 Sobic005G202300 Sobic005G202300 Sobic003G319400--Sobic005G202300 Sobic003G319400--Sobic004G306900 Sobic001G438200 Sobic001G438200 Sobic003G319400--Sobic001G438200 Sobic003G319400--Sobic009G181600 Sobic003G319400--Sobic007G086300 Sobic003G282200 Sobic003G282200 Sobic003G319400--Sobic003G282200 Sobic003G064800 Sobic003G064800 Sobic003G319400--Sobic003G064800 Sobic003G280000 Sobic003G280000 Sobic003G319400--Sobic003G280000 Sobic006G135300--Sobic006G092700 Sobic006G135300--Sobic010G082000 Sobic006G135300--Sobic007G073000 Sobic006G135300--Sobic010G028100 Sobic006G135300--Sobic006G019700 Sobic006G135300--Sobic010G152400 Sobic003G322100 Sobic003G322100 Sobic006G135300--Sobic003G322100 Sobic006G135300--Sobic004G306900 Sobic006G135300--Sobic002G146000 Sobic003G182200 Sobic003G182200 Sobic007G100700--Sobic003G182200 Sobic007G100700--Sobic003G426500 Sobic007G008600 Sobic007G008600 Sobic007G100700--Sobic007G008600 Sobic002G255000 Sobic002G255000 Sobic007G100700--Sobic002G255000 Sobic008G011700 Sobic008G011700 Sobic007G100700--Sobic008G011700 Sobic010G066800 Sobic010G066800 Sobic007G100700--Sobic010G066800 Sobic007G100700--Sobic006G106900 Sobic007G100700--Sobic003G064800 Sobic007G100700--Sobic004G306900 Sobic003G426500--Sobic007G100700 Sobic003G426500--Sobic003G182200 Sobic003G426500--Sobic008G011700 Sobic003G426500--Sobic010G066800 Sobic001G067100 Sobic001G067100 Sobic003G426500--Sobic001G067100 Sobic002G068000 Sobic002G068000 Sobic003G426500--Sobic002G068000 Sobic009G259800 Sobic009G259800 Sobic003G426500--Sobic009G259800 Sobic010G158400 Sobic010G158400 Sobic003G426500--Sobic010G158400 Sobic003G349400 Sobic003G349400 Sobic003G426500--Sobic003G349400 Sobic006G028500 Sobic006G028500 Sobic004G306900--Sobic006G028500 Sobic004G306900--Sobic003G064800 Sobic004G306900--Sobic007G086300 Sobic004G306900--Sobic003G000100 Sobic004G306900--Sobic004G106100 Sobic004G306900--Sobic006G019700 Sobic004G306900--Sobic003G319400 Sobic004G306900--Sobic010G152400 Sobic004G322100 Sobic004G322100 Sobic004G306900--Sobic004G322100 Sobic009G181600--Sobic006G106900 Sobic009G181600--Sobic003G319400 Sobic009G181600--Sobic005G202300 Sobic009G181600--Sobic006G092700 Sobic008G164450 Sobic008G164450 Sobic009G181600--Sobic008G164450 Sobic002G343100 Sobic002G343100 Sobic009G181600--Sobic002G343100 Sobic004G029400 Sobic004G029400 Sobic009G181600--Sobic004G029400 Sobic007G037600 Sobic007G037600 Sobic009G181600--Sobic007G037600 Sobic010G031700 Sobic010G031700 Sobic009G181600--Sobic010G031700 Sobic010G082000--Sobic006G092700 Sobic003G240400 Sobic003G240400 Sobic010G082000--Sobic003G240400 Sobic010G082000--Sobic006G135300 Sobic010G082000--Sobic010G152400 Sobic010G082000--Sobic006G028500 Sobic003G215300 Sobic003G215300 Sobic010G082000--Sobic003G215300 Sobic010G082000--Sobic006G019700 Sobic010G082000--Sobic007G073000 Sobic006G196400 Sobic006G196400 Sobic010G082000--Sobic006G196400
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.