Gene annotation
Transcriptome id Sobic.010G001300.1
Synonym Sb10g000330
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence (PubMedID : 27586543)
Protein transferase (At) (PubMedID : 27208977)
transferase family protein, putative, expressed
UniProt C5Z225
Pfam PF02458
Panther DB PTHR31896 PTHR31896:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016747; transferase activity, transferring acyl groups other than amino-acyl groups


Orthologs (automatic annotation)
TAIR AT5G42830 : HXXXD-type acyl-transferase family protein
RAP-DB (Rice) LOC_Os06g01350.1 : transferase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a041146
Brachypodium -
Barley HORVU7Hr1G000970.1 , HORVU7Hr1G000970.2 , HORVU7Hr1G000970.3 , HORVU7Hr1G000970.4
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G218500 MATH domain containing protein, expressed -
2 Sobic.004G014600 disease resistance protein RGA2, putative, expressed -
3 Sobic.007G135100 - -
4 Sobic.004G119800 expansin precursor, putative, expressed -
5 Sobic.002G195600 Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
6 Sobic.006G196400 U-box, putative, expressed -
7 Sobic.006G092700 MLO domain containing protein, putative, expressed K08472: mlo protein
8 Sobic.010G097200 expressed protein -
9 Sobic.001G209300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@secretory protein, putative, expressed -
10 Sobic.003G017601 - -
11 Sobic.007G073000 - -
12 Sobic.006G003600 transporter family protein, putative, expressed -
13 Sobic.005G224200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RGH1A, putative, expressed -
14 Sobic.006G135300 expressed protein -
15 Sobic.008G191400 expressed protein -
16 Sobic.001G299100 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
17 Sobic.009G259800 zinc finger, C3HC4 type domain containing protein, expressed K10664: E3 ubiquitin-protein ligase ATL6/9/15/31/42/55
18 Sobic.005G175900 expressed protein -
19 Sobic.007G090600 CSLC3 - cellulose synthase-like family C, expressed -
20 Sobic.002G146000 "Localized in cytoplasm, involved in the process of drought defense"(PubMedID : 27231650)@dehydrogenase, putative, expressed K09753: cinnamoyl-CoA reductase


Gene co-expression network
sample Sobic010G001300 Sobic010G001300 Sobic001G218500 Sobic001G218500 Sobic010G001300--Sobic001G218500 Sobic004G014600 Sobic004G014600 Sobic010G001300--Sobic004G014600 Sobic007G135100 Sobic007G135100 Sobic010G001300--Sobic007G135100 Sobic004G119800 Sobic004G119800 Sobic010G001300--Sobic004G119800 Sobic002G195600 Sobic002G195600 Sobic010G001300--Sobic002G195600 Sobic006G196400 Sobic006G196400 Sobic010G001300--Sobic006G196400 Sobic006G092700 Sobic006G092700 Sobic010G001300--Sobic006G092700 Sobic010G097200 Sobic010G097200 Sobic010G001300--Sobic010G097200 Sobic001G209300 Sobic001G209300 Sobic010G001300--Sobic001G209300 Sobic003G020500 Sobic003G020500 Sobic001G218500--Sobic003G020500 Sobic001G218500--Sobic004G014600 Sobic003G079100 Sobic003G079100 Sobic001G218500--Sobic003G079100 Sobic001G342000 Sobic001G342000 Sobic001G218500--Sobic001G342000 Sobic002G111900 Sobic002G111900 Sobic001G218500--Sobic002G111900 Sobic009G165100 Sobic009G165100 Sobic001G218500--Sobic009G165100 Sobic002G029600 Sobic002G029600 Sobic001G218500--Sobic002G029600 Sobic003G017601 Sobic003G017601 Sobic001G218500--Sobic003G017601 Sobic003G441601 Sobic003G441601 Sobic001G218500--Sobic003G441601 Sobic004G014600--Sobic003G441601 Sobic007G090600 Sobic007G090600 Sobic004G014600--Sobic007G090600 Sobic004G014600--Sobic009G165100 Sobic005G182800 Sobic005G182800 Sobic004G014600--Sobic005G182800 Sobic004G014600--Sobic003G079100 Sobic010G213600 Sobic010G213600 Sobic004G014600--Sobic010G213600 Sobic005G182900 Sobic005G182900 Sobic004G014600--Sobic005G182900 Sobic006G031100 Sobic006G031100 Sobic004G014600--Sobic006G031100 Sobic002G289500 Sobic002G289500 Sobic004G014600--Sobic002G289500 Sobic007G073000 Sobic007G073000 Sobic007G135100--Sobic007G073000 Sobic007G135100--Sobic004G014600 Sobic005G046801 Sobic005G046801 Sobic007G135100--Sobic005G046801 Sobic010G028100 Sobic010G028100 Sobic007G135100--Sobic010G028100 Sobic002G146000 Sobic002G146000 Sobic007G135100--Sobic002G146000 Sobic007G135100--Sobic006G092700 Sobic007G135100--Sobic002G195600 Sobic005G224200 Sobic005G224200 Sobic007G135100--Sobic005G224200 Sobic007G135100--Sobic007G090600 Sobic005G080600 Sobic005G080600 Sobic004G119800--Sobic005G080600 Sobic004G306900 Sobic004G306900 Sobic004G119800--Sobic004G306900 Sobic004G119800--Sobic006G196400 Sobic009G259800 Sobic009G259800 Sobic004G119800--Sobic009G259800 Sobic001G218400 Sobic001G218400 Sobic004G119800--Sobic001G218400 Sobic006G106900 Sobic006G106900 Sobic004G119800--Sobic006G106900 Sobic007G206800 Sobic007G206800 Sobic004G119800--Sobic007G206800 Sobic006G205700 Sobic006G205700 Sobic004G119800--Sobic006G205700 Sobic004G119800--Sobic006G092700 Sobic002G195600--Sobic007G073000 Sobic002G195600--Sobic006G196400 Sobic008G138900 Sobic008G138900 Sobic002G195600--Sobic008G138900 Sobic003G215300 Sobic003G215300 Sobic002G195600--Sobic003G215300 Sobic003G240400 Sobic003G240400 Sobic002G195600--Sobic003G240400 Sobic002G195600--Sobic004G014600 Sobic002G195600--Sobic007G090600 Sobic002G195600--Sobic006G092700 Sobic006G135300 Sobic006G135300 Sobic002G195600--Sobic006G135300 Sobic006G196400--Sobic006G031100 Sobic006G196400--Sobic007G090600 Sobic006G196400--Sobic005G080600 Sobic006G196400--Sobic003G240400 Sobic006G196400--Sobic003G215300 Sobic002G115600 Sobic002G115600 Sobic006G196400--Sobic002G115600 Sobic005G175900 Sobic005G175900 Sobic006G196400--Sobic005G175900 Sobic010G082000 Sobic010G082000 Sobic006G196400--Sobic010G082000 Sobic006G196400--Sobic006G205700 Sobic006G092700--Sobic006G135300 Sobic006G092700--Sobic010G082000 Sobic006G092700--Sobic010G028100 Sobic003G000100 Sobic003G000100 Sobic006G092700--Sobic003G000100 Sobic006G092700--Sobic007G073000 Sobic010G152400 Sobic010G152400 Sobic006G092700--Sobic010G152400 Sobic006G092700--Sobic002G146000 Sobic006G092700--Sobic004G306900 Sobic006G019700 Sobic006G019700 Sobic006G092700--Sobic006G019700 Sobic003G167300 Sobic003G167300 Sobic010G097200--Sobic003G167300 Sobic010G097200--Sobic006G205700 Sobic008G037900 Sobic008G037900 Sobic010G097200--Sobic008G037900 Sobic007G037600 Sobic007G037600 Sobic010G097200--Sobic007G037600 Sobic005G033000 Sobic005G033000 Sobic010G097200--Sobic005G033000 Sobic009G065700 Sobic009G065700 Sobic010G097200--Sobic009G065700 Sobic003G441800 Sobic003G441800 Sobic010G097200--Sobic003G441800 Sobic010G097200--Sobic004G119800 Sobic010G097200--Sobic004G014600 Sobic010G241800 Sobic010G241800 Sobic001G209300--Sobic010G241800 Sobic010G168400 Sobic010G168400 Sobic001G209300--Sobic010G168400 Sobic003G426500 Sobic003G426500 Sobic001G209300--Sobic003G426500 Sobic007G100700 Sobic007G100700 Sobic001G209300--Sobic007G100700 Sobic003G203600 Sobic003G203600 Sobic001G209300--Sobic003G203600 Sobic001G209300--Sobic004G119800 Sobic008G011700 Sobic008G011700 Sobic001G209300--Sobic008G011700 Sobic003G182200 Sobic003G182200 Sobic001G209300--Sobic003G182200 Sobic001G067100 Sobic001G067100 Sobic001G209300--Sobic001G067100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.