Gene annotation
Transcriptome id Sobic.008G118400.2,Sobic.008G118400.1
Synonym ACBP4, Sb08g017210
Functional annotation kelch repeat protein, putative, expressed
UniProt C5YPE4 , A0A1Z5R7A9
Pfam PF01344 PF13415
Panther DB PTHR23244 PTHR23244:SF315
NCBI CDD KOG0379; Kelch repeat-containing proteins
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G05420 : acyl-CoA binding protein 4
RAP-DB (Rice) LOC_Os12g35560.1 : kelch repeat protein, putative, expressed
MaizeGDB (Corn) Zm00025a025539
Brachypodium KQJ86451
Barley HORVU5Hr1G025310.8 , HORVU5Hr1G025310.9 , HORVU5Hr1G025310.1 , HORVU5Hr1G025310.6 , HORVU5Hr1G025310.7 , HORVU5Hr1G025310.5 , HORVU5Hr1G025310.10
Wheat TraesCS5B02G100100 , TraesCS5B02G100100 , TraesCS5D02G106400 , TraesCS5A02G094000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G184200 haloacid dehalogenase-like hydrolase family protein, putative, expressed -
2 Sobic.003G043800 BT1 family protein, putative, expressed -
3 Sobic.004G222600 expressed protein -
4 Sobic.008G141800 Probable galacturonosyltransferase 13(PubMedID : 26186930)@glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
5 Sobic.003G023500 syntaxin, putative, expressed K08489: syntaxin 16
6 Sobic.010G216000 villin protein, putative, expressed K05768: gelsolin
7 Sobic.001G237500 transporter family protein, putative, expressed -
8 Sobic.004G207900 nucleotide-sugar transporter family protein, putative, expressed -
9 Sobic.001G416600 NAD dependent epimerase/dehydratase family domain containing protein, expressed K12450: UDP-glucose 4,6-dehydratase
10 Sobic.001G409900 transporter, putative, expressed -
11 Sobic.001G161700 vesicle-fusing ATPase, putative, expressed K06027: NSF, vesicle-fusing ATPase
12 Sobic.003G237400 plastidic ATP/ADP-transporter, putative, expressed K03301: ATP:ADP antiporter, AAA family
13 Sobic.001G012900 brefeldin A-sensitive Golgi protein-like, putative, expressed -
14 Sobic.009G182700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ZOS5-11 - C2H2 zinc finger protein, expressed K13104: ZNF830, zinc finger protein 830
15 Sobic.009G226400 dynamin family protein, putative, expressed -
16 Sobic.001G013200 actin-related protein 2/3 complex subunit 4, putative, expressed K05755: actin related protein 2/3 complex, subunit 4
17 Sobic.003G217100 Yip1 domain containing protein, expressed -
18 Sobic.007G024200 ribosome, putative, expressed -
19 Sobic.005G184200 WD domain, G-beta repeat domain containing protein, expressed K14003: PREB, prolactin regulatory element-binding protein
20 Sobic.002G332100 expressed protein -


Gene co-expression network
sample Sobic008G118400 Sobic008G118400 Sobic007G184200 Sobic007G184200 Sobic008G118400--Sobic007G184200 Sobic003G043800 Sobic003G043800 Sobic008G118400--Sobic003G043800 Sobic004G222600 Sobic004G222600 Sobic008G118400--Sobic004G222600 Sobic008G141800 Sobic008G141800 Sobic008G118400--Sobic008G141800 Sobic003G023500 Sobic003G023500 Sobic008G118400--Sobic003G023500 Sobic010G216000 Sobic010G216000 Sobic008G118400--Sobic010G216000 Sobic001G237500 Sobic001G237500 Sobic008G118400--Sobic001G237500 Sobic004G207900 Sobic004G207900 Sobic008G118400--Sobic004G207900 Sobic001G416600 Sobic001G416600 Sobic008G118400--Sobic001G416600 Sobic004G039400 Sobic004G039400 Sobic007G184200--Sobic004G039400 Sobic009G112900 Sobic009G112900 Sobic007G184200--Sobic009G112900 Sobic003G237400 Sobic003G237400 Sobic007G184200--Sobic003G237400 Sobic003G167000 Sobic003G167000 Sobic007G184200--Sobic003G167000 Sobic008G102600 Sobic008G102600 Sobic007G184200--Sobic008G102600 Sobic008G018300 Sobic008G018300 Sobic007G184200--Sobic008G018300 Sobic001G378200 Sobic001G378200 Sobic007G184200--Sobic001G378200 Sobic001G013200 Sobic001G013200 Sobic007G184200--Sobic001G013200 Sobic007G184200--Sobic008G118400 Sobic006G217300 Sobic006G217300 Sobic003G043800--Sobic006G217300 Sobic001G122500 Sobic001G122500 Sobic003G043800--Sobic001G122500 Sobic010G026300 Sobic010G026300 Sobic003G043800--Sobic010G026300 Sobic004G124500 Sobic004G124500 Sobic003G043800--Sobic004G124500 Sobic003G043800--Sobic004G207900 Sobic003G043800--Sobic001G378200 Sobic006G207900 Sobic006G207900 Sobic003G043800--Sobic006G207900 Sobic006G055400 Sobic006G055400 Sobic003G043800--Sobic006G055400 Sobic005G207400 Sobic005G207400 Sobic003G043800--Sobic005G207400 Sobic007G150000 Sobic007G150000 Sobic004G222600--Sobic007G150000 Sobic004G222600--Sobic003G023500 Sobic003G217100 Sobic003G217100 Sobic004G222600--Sobic003G217100 Sobic004G222600--Sobic001G237500 Sobic001G309500 Sobic001G309500 Sobic004G222600--Sobic001G309500 Sobic002G296300 Sobic002G296300 Sobic004G222600--Sobic002G296300 Sobic002G090700 Sobic002G090700 Sobic004G222600--Sobic002G090700 Sobic003G332401 Sobic003G332401 Sobic004G222600--Sobic003G332401 Sobic007G115100 Sobic007G115100 Sobic004G222600--Sobic007G115100 Sobic008G141800--Sobic004G207900 Sobic006G232000 Sobic006G232000 Sobic008G141800--Sobic006G232000 Sobic008G141800--Sobic006G217300 Sobic007G205900 Sobic007G205900 Sobic008G141800--Sobic007G205900 Sobic003G374700 Sobic003G374700 Sobic008G141800--Sobic003G374700 Sobic003G126300 Sobic003G126300 Sobic008G141800--Sobic003G126300 Sobic008G141800--Sobic003G043800 Sobic004G236200 Sobic004G236200 Sobic008G141800--Sobic004G236200 Sobic004G132300 Sobic004G132300 Sobic008G141800--Sobic004G132300 Sobic003G023500--Sobic004G222600 Sobic003G023500--Sobic003G217100 Sobic002G214900 Sobic002G214900 Sobic003G023500--Sobic002G214900 Sobic001G214200 Sobic001G214200 Sobic003G023500--Sobic001G214200 Sobic001G409900 Sobic001G409900 Sobic003G023500--Sobic001G409900 Sobic009G191600 Sobic009G191600 Sobic003G023500--Sobic009G191600 Sobic006G222400 Sobic006G222400 Sobic003G023500--Sobic006G222400 Sobic004G054300 Sobic004G054300 Sobic003G023500--Sobic004G054300 Sobic002G376500 Sobic002G376500 Sobic003G023500--Sobic002G376500 Sobic004G034300 Sobic004G034300 Sobic010G216000--Sobic004G034300 Sobic010G178600 Sobic010G178600 Sobic010G216000--Sobic010G178600 Sobic002G408800 Sobic002G408800 Sobic010G216000--Sobic002G408800 Sobic003G346400 Sobic003G346400 Sobic010G216000--Sobic003G346400 Sobic001G161700 Sobic001G161700 Sobic010G216000--Sobic001G161700 Sobic001G012900 Sobic001G012900 Sobic010G216000--Sobic001G012900 Sobic002G070600 Sobic002G070600 Sobic010G216000--Sobic002G070600 Sobic003G348800 Sobic003G348800 Sobic010G216000--Sobic003G348800 Sobic002G029300 Sobic002G029300 Sobic010G216000--Sobic002G029300 Sobic010G105600 Sobic010G105600 Sobic001G237500--Sobic010G105600 Sobic006G257001 Sobic006G257001 Sobic001G237500--Sobic006G257001 Sobic001G105100 Sobic001G105100 Sobic001G237500--Sobic001G105100 Sobic001G067900 Sobic001G067900 Sobic001G237500--Sobic001G067900 Sobic001G237500--Sobic003G217100 Sobic001G237500--Sobic004G222600 Sobic002G131900 Sobic002G131900 Sobic001G237500--Sobic002G131900 Sobic003G052400 Sobic003G052400 Sobic001G237500--Sobic003G052400 Sobic001G237500--Sobic004G132300 Sobic004G207900--Sobic001G161700 Sobic009G077600 Sobic009G077600 Sobic004G207900--Sobic009G077600 Sobic004G100200 Sobic004G100200 Sobic004G207900--Sobic004G100200 Sobic001G023100 Sobic001G023100 Sobic004G207900--Sobic001G023100 Sobic004G207900--Sobic003G346400 Sobic004G025300 Sobic004G025300 Sobic004G207900--Sobic004G025300 Sobic002G141700 Sobic002G141700 Sobic004G207900--Sobic002G141700 Sobic008G129600 Sobic008G129600 Sobic004G207900--Sobic008G129600 Sobic002G294100 Sobic002G294100 Sobic004G207900--Sobic002G294100 Sobic007G178200 Sobic007G178200 Sobic001G416600--Sobic007G178200 Sobic008G016900 Sobic008G016900 Sobic001G416600--Sobic008G016900 Sobic001G416600--Sobic001G409900 Sobic002G362900 Sobic002G362900 Sobic001G416600--Sobic002G362900 Sobic003G392200 Sobic003G392200 Sobic001G416600--Sobic003G392200 Sobic002G243200 Sobic002G243200 Sobic001G416600--Sobic002G243200 Sobic007G188100 Sobic007G188100 Sobic001G416600--Sobic007G188100 Sobic001G442900 Sobic001G442900 Sobic001G416600--Sobic001G442900 Sobic009G104000 Sobic009G104000 Sobic001G416600--Sobic009G104000
Octagon: transcription factors


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