Gene annotation
Transcriptome id Sobic.006G207900.1
Synonym Sb06g027880
Functional annotation DNA binding protein, putative, expressed
UniProt C5YFJ9
Pfam PF02485
Panther DB PTHR31042 PTHR31042:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0008375acetylglucosaminyltransferase activity


Orthologs (automatic annotation)
TAIR AT4G31350 : Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
RAP-DB (Rice) LOC_Os04g51794.2 : DNA binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a056978 , Zm00025a009868
Brachypodium PNT61801 , KQJ84453 , KQJ84452
Barley HORVU2Hr1G100480.11 , HORVU2Hr1G100480.10 , HORVU2Hr1G100480.3 , HORVU2Hr1G100480.2 , HORVU2Hr1G100480.7 , HORVU2Hr1G100480.5 , HORVU2Hr1G100480.4 , HORVU2Hr1G100480.9 , HORVU2Hr1G100480.8
Wheat TraesCS2B02G452200 , TraesCS2B02G452200 , TraesCS2B02G452200 , TraesCS2B02G452200 , TraesCS2B02G452200 , TraesCS2D02G428700 , TraesCS2D02G428700 , TraesCS2A02G430900 , TraesCS2A02G430900 , TraesCS2A02G430900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G217300 NAD dependent epimerase/dehydratase family domain containing protein, expressed K12448: UXE, UDP-arabinose 4-epimerase
2 Sobic.009G169400 expressed protein -
3 Sobic.003G272400 DUF292 domain containing protein, expressed -
4 Sobic.003G043800 BT1 family protein, putative, expressed -
5 Sobic.003G126300 OsRhmbd2 - Putative Rhomboid homologue, expressed -
6 Sobic.001G312500 protein phosphatase 2C, putative, expressed K14803: protein phosphatase PTC2/3
7 Sobic.004G207900 nucleotide-sugar transporter family protein, putative, expressed -
8 Sobic.001G122500 SNARE associated Golgi protein, putative, expressed -
9 Sobic.004G124500 transporter family protein, putative, expressed -
10 Sobic.004G162200 heparan-alpha-glucosaminide N-acetyltransferase, putative, expressed -
11 Sobic.003G374700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Sad1 / UNC-like C-terminal domain containing protein, putative, expressed -
12 Sobic.004G353600 sucrose transporters(PubMedID : 23805151)@Sucrose transporter genes(PubMedID : 24456189)@Sugar transporter(PubMedID : 27330561)@transporter, major facilitator family, putative, expressed K15378: solute carrier family 45, member 1/2/4
13 Sobic.002G301300 SNF7 domain containing protein, putative, expressed K12193: VPS24, charged multivesicular body protein 3
14 Sobic.003G336100 auxin efflux carrier component, putative, expressed -
15 Sobic.006G115300 amino acid transporter, putative, expressed -
16 Sobic.004G100200 protein phosphatase 1 regulatory subunit SDS22, putative, expressed K17550: PPP1R7, protein phosphatase 1 regulatory subunit 7
17 Sobic.009G179600 expressed protein -
18 Sobic.006G069200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl hydrolases family 17, putative, expressed -
19 Sobic.002G294100 DOMON domain containing protein, expressed -
20 Sobic.008G141800 Probable galacturonosyltransferase 13(PubMedID : 26186930)@glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase


Gene co-expression network
sample Sobic006G207900 Sobic006G207900 Sobic006G217300 Sobic006G217300 Sobic006G207900--Sobic006G217300 Sobic009G169400 Sobic009G169400 Sobic006G207900--Sobic009G169400 Sobic003G272400 Sobic003G272400 Sobic006G207900--Sobic003G272400 Sobic003G043800 Sobic003G043800 Sobic006G207900--Sobic003G043800 Sobic003G126300 Sobic003G126300 Sobic006G207900--Sobic003G126300 Sobic001G312500 Sobic001G312500 Sobic006G207900--Sobic001G312500 Sobic004G207900 Sobic004G207900 Sobic006G207900--Sobic004G207900 Sobic001G122500 Sobic001G122500 Sobic006G207900--Sobic001G122500 Sobic004G124500 Sobic004G124500 Sobic006G207900--Sobic004G124500 Sobic006G217300--Sobic001G122500 Sobic006G217300--Sobic006G207900 Sobic007G026800 Sobic007G026800 Sobic006G217300--Sobic007G026800 Sobic006G217300--Sobic003G043800 Sobic010G064600 Sobic010G064600 Sobic006G217300--Sobic010G064600 Sobic006G217300--Sobic001G312500 Sobic002G431000 Sobic002G431000 Sobic006G217300--Sobic002G431000 Sobic010G184300 Sobic010G184300 Sobic006G217300--Sobic010G184300 Sobic004G228800 Sobic004G228800 Sobic006G217300--Sobic004G228800 Sobic009G169400--Sobic006G207900 Sobic007G169200 Sobic007G169200 Sobic009G169400--Sobic007G169200 Sobic004G162200 Sobic004G162200 Sobic009G169400--Sobic004G162200 Sobic004G278000 Sobic004G278000 Sobic009G169400--Sobic004G278000 Sobic002G197600 Sobic002G197600 Sobic009G169400--Sobic002G197600 Sobic009G169400--Sobic001G122500 Sobic008G059000 Sobic008G059000 Sobic009G169400--Sobic008G059000 Sobic004G176900 Sobic004G176900 Sobic009G169400--Sobic004G176900 Sobic004G244100 Sobic004G244100 Sobic009G169400--Sobic004G244100 Sobic004G353600 Sobic004G353600 Sobic003G272400--Sobic004G353600 Sobic003G281900 Sobic003G281900 Sobic003G272400--Sobic003G281900 Sobic003G252400 Sobic003G252400 Sobic003G272400--Sobic003G252400 Sobic002G306000 Sobic002G306000 Sobic003G272400--Sobic002G306000 Sobic010G260300 Sobic010G260300 Sobic003G272400--Sobic010G260300 Sobic003G272400--Sobic003G126300 Sobic003G272400--Sobic006G207900 Sobic001G110900 Sobic001G110900 Sobic003G272400--Sobic001G110900 Sobic004G309600 Sobic004G309600 Sobic003G272400--Sobic004G309600 Sobic003G043800--Sobic006G217300 Sobic003G043800--Sobic001G122500 Sobic010G026300 Sobic010G026300 Sobic003G043800--Sobic010G026300 Sobic003G043800--Sobic004G124500 Sobic003G043800--Sobic004G207900 Sobic001G378200 Sobic001G378200 Sobic003G043800--Sobic001G378200 Sobic003G043800--Sobic006G207900 Sobic006G055400 Sobic006G055400 Sobic003G043800--Sobic006G055400 Sobic005G207400 Sobic005G207400 Sobic003G043800--Sobic005G207400 Sobic003G126300--Sobic004G228800 Sobic009G079300 Sobic009G079300 Sobic003G126300--Sobic009G079300 Sobic004G004200 Sobic004G004200 Sobic003G126300--Sobic004G004200 Sobic008G110600 Sobic008G110600 Sobic003G126300--Sobic008G110600 Sobic004G261600 Sobic004G261600 Sobic003G126300--Sobic004G261600 Sobic006G034000 Sobic006G034000 Sobic003G126300--Sobic006G034000 Sobic003G126300--Sobic003G272400 Sobic007G056600 Sobic007G056600 Sobic003G126300--Sobic007G056600 Sobic006G033200 Sobic006G033200 Sobic003G126300--Sobic006G033200 Sobic001G511300 Sobic001G511300 Sobic001G312500--Sobic001G511300 Sobic001G312500--Sobic006G217300 Sobic001G312500--Sobic001G378200 Sobic003G202600 Sobic003G202600 Sobic001G312500--Sobic003G202600 Sobic001G312500--Sobic005G207400 Sobic004G100200 Sobic004G100200 Sobic001G312500--Sobic004G100200 Sobic001G312500--Sobic007G026800 Sobic001G312500--Sobic003G043800 Sobic002G214400 Sobic002G214400 Sobic001G312500--Sobic002G214400 Sobic001G161700 Sobic001G161700 Sobic004G207900--Sobic001G161700 Sobic009G077600 Sobic009G077600 Sobic004G207900--Sobic009G077600 Sobic004G207900--Sobic004G100200 Sobic001G023100 Sobic001G023100 Sobic004G207900--Sobic001G023100 Sobic003G346400 Sobic003G346400 Sobic004G207900--Sobic003G346400 Sobic004G025300 Sobic004G025300 Sobic004G207900--Sobic004G025300 Sobic002G141700 Sobic002G141700 Sobic004G207900--Sobic002G141700 Sobic008G129600 Sobic008G129600 Sobic004G207900--Sobic008G129600 Sobic002G294100 Sobic002G294100 Sobic004G207900--Sobic002G294100 Sobic001G122500--Sobic006G217300 Sobic001G214200 Sobic001G214200 Sobic001G122500--Sobic001G214200 Sobic004G350300 Sobic004G350300 Sobic001G122500--Sobic004G350300 Sobic006G263100 Sobic006G263100 Sobic001G122500--Sobic006G263100 Sobic010G188100 Sobic010G188100 Sobic001G122500--Sobic010G188100 Sobic003G002400 Sobic003G002400 Sobic001G122500--Sobic003G002400 Sobic010G026700 Sobic010G026700 Sobic001G122500--Sobic010G026700 Sobic001G409900 Sobic001G409900 Sobic001G122500--Sobic001G409900 Sobic002G214900 Sobic002G214900 Sobic001G122500--Sobic002G214900 Sobic004G124500--Sobic007G056600 Sobic007G180600 Sobic007G180600 Sobic004G124500--Sobic007G180600 Sobic003G269800 Sobic003G269800 Sobic004G124500--Sobic003G269800 Sobic004G124500--Sobic004G100200 Sobic004G124500--Sobic003G043800 Sobic004G124500--Sobic004G228800 Sobic004G124500--Sobic004G207900 Sobic009G099200 Sobic009G099200 Sobic004G124500--Sobic009G099200 Sobic004G236200 Sobic004G236200 Sobic004G124500--Sobic004G236200
Octagon: transcription factors


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