Gene annotation
Transcriptome id Sobic.001G312500.2,Sobic.001G312500.1,Sobic.001G312500.3
Synonym Sb01g030380
Functional annotation protein phosphatase 2C, putative, expressed
UniProt A0A1B6QM64 , A0A1Z5S8H1 , A0A1Z5S8F9
Pfam PF00481
Panther DB PTHR13832 PTHR13832:SF252
NCBI CDD KOG0698; Serine/threonine protein phosphatase
KEGG Orthology K14803; protein phosphatase PTC2/3
Gene Ontology GO:0003824; catalytic activity GO:0006470protein dephosphorylation GO:0004722protein serine/threonine phosphatase activity


Orthologs (automatic annotation)
TAIR AT2G33700 : Protein phosphatase 2C family protein
RAP-DB (Rice) LOC_Os10g39540.3,LOC_Os10g39540.1 : protein phosphatase 2C, putative, expressed
MaizeGDB (Corn) Zm00025a003198 , Zm00025a052268
Brachypodium -
Barley HORVU1Hr1G052160.3 , HORVU1Hr1G052160.2 , HORVU1Hr1G052160.1 , HORVU1Hr1G052160.4
Wheat TraesCS1B02G095600 , TraesCS1D02G205700 , TraesCS1A02G202300 , TraesCS1B02G216500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G511300 expressed protein -
2 Sobic.006G217300 NAD dependent epimerase/dehydratase family domain containing protein, expressed K12448: UXE, UDP-arabinose 4-epimerase
3 Sobic.001G378200 tetratricopeptide repeat domain containing protein, expressed -
4 Sobic.003G202600 single myb histone, putative, expressed K09422: transcription factor MYB, plant
5 Sobic.005G207400 - -
6 Sobic.004G100200 protein phosphatase 1 regulatory subunit SDS22, putative, expressed K17550: PPP1R7, protein phosphatase 1 regulatory subunit 7
7 Sobic.007G026800 actin, putative, expressed K18584: ACTR3, actin-related protein 3
8 Sobic.003G043800 BT1 family protein, putative, expressed -
9 Sobic.002G214400 choline/ethanolamine kinase, putative, expressed K00894: ETNK, ethanolamine kinase
10 Sobic.001G457700 expressed protein -
11 Sobic.006G207900 DNA binding protein, putative, expressed -
12 Sobic.002G431000 transporter, putative, expressed -
13 Sobic.003G199500 integral membrane protein, putative, expressed -
14 Sobic.007G056100 expressed protein K15077: elongin-A
15 Sobic.001G122500 SNARE associated Golgi protein, putative, expressed -
16 Sobic.002G268800 arsenical pump-driving ATPase, putative, expressed K01551: arsA, ASNA1, arsenite/tail-anchored protein-transporting ATPase
17 Sobic.001G214200 lysM domain containing protein, putative, expressed -
18 Sobic.004G337300 expressed protein -
19 Sobic.002G294100 DOMON domain containing protein, expressed -
20 Sobic.005G177700 transmembrane protein 49, putative, expressed -


Gene co-expression network
sample Sobic001G312500 Sobic001G312500 Sobic001G511300 Sobic001G511300 Sobic001G312500--Sobic001G511300 Sobic006G217300 Sobic006G217300 Sobic001G312500--Sobic006G217300 Sobic001G378200 Sobic001G378200 Sobic001G312500--Sobic001G378200 Sobic003G202600 Sobic003G202600 Sobic001G312500--Sobic003G202600 Sobic005G207400 Sobic005G207400 Sobic001G312500--Sobic005G207400 Sobic004G100200 Sobic004G100200 Sobic001G312500--Sobic004G100200 Sobic007G026800 Sobic007G026800 Sobic001G312500--Sobic007G026800 Sobic003G043800 Sobic003G043800 Sobic001G312500--Sobic003G043800 Sobic002G214400 Sobic002G214400 Sobic001G312500--Sobic002G214400 Sobic001G511300--Sobic001G312500 Sobic001G313500 Sobic001G313500 Sobic001G511300--Sobic001G313500 Sobic003G276100 Sobic003G276100 Sobic001G511300--Sobic003G276100 Sobic001G008100 Sobic001G008100 Sobic001G511300--Sobic001G008100 Sobic001G050400 Sobic001G050400 Sobic001G511300--Sobic001G050400 Sobic007G012900 Sobic007G012900 Sobic001G511300--Sobic007G012900 Sobic001G511300--Sobic001G378200 Sobic002G401700 Sobic002G401700 Sobic001G511300--Sobic002G401700 Sobic001G511300--Sobic003G202600 Sobic001G122500 Sobic001G122500 Sobic006G217300--Sobic001G122500 Sobic006G207900 Sobic006G207900 Sobic006G217300--Sobic006G207900 Sobic006G217300--Sobic007G026800 Sobic006G217300--Sobic003G043800 Sobic010G064600 Sobic010G064600 Sobic006G217300--Sobic010G064600 Sobic006G217300--Sobic001G312500 Sobic002G431000 Sobic002G431000 Sobic006G217300--Sobic002G431000 Sobic010G184300 Sobic010G184300 Sobic006G217300--Sobic010G184300 Sobic004G228800 Sobic004G228800 Sobic006G217300--Sobic004G228800 Sobic001G465400 Sobic001G465400 Sobic001G378200--Sobic001G465400 Sobic001G112400 Sobic001G112400 Sobic001G378200--Sobic001G112400 Sobic006G012700 Sobic006G012700 Sobic001G378200--Sobic006G012700 Sobic004G078700 Sobic004G078700 Sobic001G378200--Sobic004G078700 Sobic004G039400 Sobic004G039400 Sobic001G378200--Sobic004G039400 Sobic001G443200 Sobic001G443200 Sobic001G378200--Sobic001G443200 Sobic001G378200--Sobic001G008100 Sobic002G262200 Sobic002G262200 Sobic001G378200--Sobic002G262200 Sobic001G378200--Sobic005G207400 Sobic001G095000 Sobic001G095000 Sobic003G202600--Sobic001G095000 Sobic002G079000 Sobic002G079000 Sobic003G202600--Sobic002G079000 Sobic002G355800 Sobic002G355800 Sobic003G202600--Sobic002G355800 Sobic007G087000 Sobic007G087000 Sobic003G202600--Sobic007G087000 Sobic001G237600 Sobic001G237600 Sobic003G202600--Sobic001G237600 Sobic010G169900 Sobic010G169900 Sobic003G202600--Sobic010G169900 Sobic001G389200 Sobic001G389200 Sobic003G202600--Sobic001G389200 Sobic006G060000 Sobic006G060000 Sobic003G202600--Sobic006G060000 Sobic003G302200 Sobic003G302200 Sobic003G202600--Sobic003G302200 Sobic005G207400--Sobic001G378200 Sobic004G025300 Sobic004G025300 Sobic005G207400--Sobic004G025300 Sobic005G207400--Sobic004G078700 Sobic001G261432 Sobic001G261432 Sobic005G207400--Sobic001G261432 Sobic001G332300 Sobic001G332300 Sobic005G207400--Sobic001G332300 Sobic007G077532 Sobic007G077532 Sobic005G207400--Sobic007G077532 Sobic005G207400--Sobic001G312500 Sobic001G127000 Sobic001G127000 Sobic005G207400--Sobic001G127000 Sobic005G207400--Sobic003G202600 Sobic004G100200--Sobic004G078700 Sobic007G005500 Sobic007G005500 Sobic004G100200--Sobic007G005500 Sobic006G260500 Sobic006G260500 Sobic004G100200--Sobic006G260500 Sobic003G209200 Sobic003G209200 Sobic004G100200--Sobic003G209200 Sobic009G077600 Sobic009G077600 Sobic004G100200--Sobic009G077600 Sobic004G100200--Sobic010G169900 Sobic003G346400 Sobic003G346400 Sobic004G100200--Sobic003G346400 Sobic004G207900 Sobic004G207900 Sobic004G100200--Sobic004G207900 Sobic004G241900 Sobic004G241900 Sobic004G100200--Sobic004G241900 Sobic007G026800--Sobic006G217300 Sobic003G377000 Sobic003G377000 Sobic007G026800--Sobic003G377000 Sobic005G177700 Sobic005G177700 Sobic007G026800--Sobic005G177700 Sobic007G026800--Sobic010G064600 Sobic007G056100 Sobic007G056100 Sobic007G026800--Sobic007G056100 Sobic007G026800--Sobic001G312500 Sobic007G026800--Sobic004G228800 Sobic009G072700 Sobic009G072700 Sobic007G026800--Sobic009G072700 Sobic007G026800--Sobic002G431000 Sobic003G043800--Sobic006G217300 Sobic003G043800--Sobic001G122500 Sobic010G026300 Sobic010G026300 Sobic003G043800--Sobic010G026300 Sobic004G124500 Sobic004G124500 Sobic003G043800--Sobic004G124500 Sobic003G043800--Sobic004G207900 Sobic003G043800--Sobic001G378200 Sobic003G043800--Sobic006G207900 Sobic006G055400 Sobic006G055400 Sobic003G043800--Sobic006G055400 Sobic003G043800--Sobic005G207400 Sobic002G294500 Sobic002G294500 Sobic002G214400--Sobic002G294500 Sobic002G214400--Sobic001G313500 Sobic002G214400--Sobic001G312500 Sobic004G003401 Sobic004G003401 Sobic002G214400--Sobic004G003401 Sobic001G541100 Sobic001G541100 Sobic002G214400--Sobic001G541100 Sobic001G105500 Sobic001G105500 Sobic002G214400--Sobic001G105500 Sobic002G214400--Sobic004G228800 Sobic010G235200 Sobic010G235200 Sobic002G214400--Sobic010G235200 Sobic003G105101 Sobic003G105101 Sobic002G214400--Sobic003G105101
Octagon: transcription factors


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