Gene annotation
Transcriptome id Sobic.003G199500.1,Sobic.003G199500.2
Synonym Sb03g026180
Functional annotation integral membrane protein, putative, expressed
UniProt O24344 , C5XPE7
Pfam PF10998
Panther DB PTHR31201 PTHR31201:SF1
NCBI CDD KOG2895; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G35460 : -
RAP-DB (Rice) LOC_Os01g40280.1 : integral membrane protein, putative, expressed
MaizeGDB (Corn) Zm00025a028510 , Zm00025a038379
Brachypodium KQK08467
Barley HORVU3Hr1G050600.4 , HORVU3Hr1G050600.2 , HORVU3Hr1G050600.3 , HORVU3Hr1G050600.1
Wheat TraesCS3A02G209900 , TraesCS3B02G240300 , TraesCS3D02G212800 , TraesCS3A02G209900
Populus -


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cDNA sequences
Sobic.003G199500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G056100 expressed protein K15077: elongin-A
2 Sobic.004G296700 ethylene-responsive element-binding protein, putative, expressed -
3 Sobic.001G313500 tobamovirus multiplication protein, putative, expressed -
4 Sobic.010G243400 expressed protein -
5 Sobic.009G160600 Yip1 domain containing protein, expressed -
6 Sobic.002G355800 calcium-binding protein, putative, expressed K08272: CAB39, calcium binding protein 39
7 Sobic.008G140400 diacylglycerol kinase 1, putative, expressed K00901: dgkA, diacylglycerol kinase (ATP)
8 Sobic.001G421400 expressed protein -
9 Sobic.001G378200 tetratricopeptide repeat domain containing protein, expressed -
10 Sobic.003G276100 ras-related protein, putative, expressed K07897: Ras-related protein Rab-7A
11 Sobic.003G058500 expressed protein -
12 Sobic.003G202600 single myb histone, putative, expressed K09422: transcription factor MYB, plant
13 Sobic.007G117800 cytochrome b561, putative, expressed K08360: cytochrome b-561
14 Sobic.001G511300 expressed protein -
15 Sobic.009G166600 nucleoside-triphosphatase, putative, expressed -
16 Sobic.001G312500 protein phosphatase 2C, putative, expressed K14803: protein phosphatase PTC2/3
17 Sobic.010G181600 WD domain, G-beta repeat domain containing protein, expressed K13137: STRAP, serine-threonine kinase receptor-associated protein
18 Sobic.003G346500 similar to Nuclear transcription factor Y subunit B-3(PubMedID : 29862293)@tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed K08065: NFYB, nuclear transcription Y subunit beta
19 Sobic.004G078700 tubulin binding cofactor C, putative, expressed K16810: TBCC domain-containing protein 1
20 Sobic.003G302200 2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase


Gene co-expression network
sample Sobic003G199500 Sobic003G199500 Sobic007G056100 Sobic007G056100 Sobic003G199500--Sobic007G056100 Sobic004G296700 Sobic004G296700 Sobic003G199500--Sobic004G296700 Sobic001G313500 Sobic001G313500 Sobic003G199500--Sobic001G313500 Sobic010G243400 Sobic010G243400 Sobic003G199500--Sobic010G243400 Sobic009G160600 Sobic009G160600 Sobic003G199500--Sobic009G160600 Sobic002G355800 Sobic002G355800 Sobic003G199500--Sobic002G355800 Sobic008G140400 Sobic008G140400 Sobic003G199500--Sobic008G140400 Sobic001G421400 Sobic001G421400 Sobic003G199500--Sobic001G421400 Sobic001G378200 Sobic001G378200 Sobic003G199500--Sobic001G378200 Sobic005G177700 Sobic005G177700 Sobic007G056100--Sobic005G177700 Sobic007G056100--Sobic010G243400 Sobic007G056100--Sobic002G355800 Sobic009G224000 Sobic009G224000 Sobic007G056100--Sobic009G224000 Sobic007G056100--Sobic003G199500 Sobic007G056100--Sobic001G421400 Sobic010G261600 Sobic010G261600 Sobic007G056100--Sobic010G261600 Sobic002G303600 Sobic002G303600 Sobic007G056100--Sobic002G303600 Sobic001G465400 Sobic001G465400 Sobic007G056100--Sobic001G465400 Sobic004G296700--Sobic003G199500 Sobic007G192100 Sobic007G192100 Sobic004G296700--Sobic007G192100 Sobic007G117800 Sobic007G117800 Sobic004G296700--Sobic007G117800 Sobic004G159000 Sobic004G159000 Sobic004G296700--Sobic004G159000 Sobic002G401700 Sobic002G401700 Sobic004G296700--Sobic002G401700 Sobic010G028400 Sobic010G028400 Sobic004G296700--Sobic010G028400 Sobic003G382900 Sobic003G382900 Sobic004G296700--Sobic003G382900 Sobic008G108500 Sobic008G108500 Sobic004G296700--Sobic008G108500 Sobic010G007400 Sobic010G007400 Sobic004G296700--Sobic010G007400 Sobic001G313500--Sobic001G421400 Sobic001G512400 Sobic001G512400 Sobic001G313500--Sobic001G512400 Sobic001G085900 Sobic001G085900 Sobic001G313500--Sobic001G085900 Sobic002G385900 Sobic002G385900 Sobic001G313500--Sobic002G385900 Sobic001G161900 Sobic001G161900 Sobic001G313500--Sobic001G161900 Sobic010G129600 Sobic010G129600 Sobic001G313500--Sobic010G129600 Sobic009G135600 Sobic009G135600 Sobic001G313500--Sobic009G135600 Sobic001G313500--Sobic010G261600 Sobic004G039300 Sobic004G039300 Sobic001G313500--Sobic004G039300 Sobic008G165000 Sobic008G165000 Sobic010G243400--Sobic008G165000 Sobic010G243400--Sobic007G056100 Sobic010G243400--Sobic010G261600 Sobic003G243700 Sobic003G243700 Sobic010G243400--Sobic003G243700 Sobic009G041700 Sobic009G041700 Sobic010G243400--Sobic009G041700 Sobic010G243400--Sobic009G224000 Sobic004G003401 Sobic004G003401 Sobic010G243400--Sobic004G003401 Sobic008G173400 Sobic008G173400 Sobic010G243400--Sobic008G173400 Sobic010G243400--Sobic001G421400 Sobic001G005600 Sobic001G005600 Sobic009G160600--Sobic001G005600 Sobic009G160600--Sobic001G161900 Sobic009G160600--Sobic003G382900 Sobic004G323700 Sobic004G323700 Sobic009G160600--Sobic004G323700 Sobic003G005200 Sobic003G005200 Sobic009G160600--Sobic003G005200 Sobic003G150900 Sobic003G150900 Sobic009G160600--Sobic003G150900 Sobic009G160600--Sobic010G129600 Sobic007G056500 Sobic007G056500 Sobic009G160600--Sobic007G056500 Sobic001G042200 Sobic001G042200 Sobic009G160600--Sobic001G042200 Sobic010G169900 Sobic010G169900 Sobic002G355800--Sobic010G169900 Sobic007G172700 Sobic007G172700 Sobic002G355800--Sobic007G172700 Sobic006G128100 Sobic006G128100 Sobic002G355800--Sobic006G128100 Sobic010G213500 Sobic010G213500 Sobic002G355800--Sobic010G213500 Sobic001G389200 Sobic001G389200 Sobic002G355800--Sobic001G389200 Sobic001G475300 Sobic001G475300 Sobic002G355800--Sobic001G475300 Sobic003G058500 Sobic003G058500 Sobic002G355800--Sobic003G058500 Sobic009G162100 Sobic009G162100 Sobic002G355800--Sobic009G162100 Sobic002G355800--Sobic005G177700 Sobic008G140400--Sobic001G005600 Sobic007G173700 Sobic007G173700 Sobic008G140400--Sobic007G173700 Sobic006G222500 Sobic006G222500 Sobic008G140400--Sobic006G222500 Sobic001G122000 Sobic001G122000 Sobic008G140400--Sobic001G122000 Sobic001G023100 Sobic001G023100 Sobic008G140400--Sobic001G023100 Sobic002G419000 Sobic002G419000 Sobic008G140400--Sobic002G419000 Sobic002G357900 Sobic002G357900 Sobic008G140400--Sobic002G357900 Sobic001G193100 Sobic001G193100 Sobic008G140400--Sobic001G193100 Sobic008G140400--Sobic003G199500 Sobic001G421400--Sobic001G313500 Sobic001G421400--Sobic010G243400 Sobic001G421400--Sobic003G382900 Sobic001G421400--Sobic001G161900 Sobic003G200600 Sobic003G200600 Sobic001G421400--Sobic003G200600 Sobic001G421400--Sobic007G056100 Sobic001G421400--Sobic001G512400 Sobic003G148900 Sobic003G148900 Sobic001G421400--Sobic003G148900 Sobic001G421400--Sobic010G261600 Sobic001G378200--Sobic001G465400 Sobic001G112400 Sobic001G112400 Sobic001G378200--Sobic001G112400 Sobic006G012700 Sobic006G012700 Sobic001G378200--Sobic006G012700 Sobic004G078700 Sobic004G078700 Sobic001G378200--Sobic004G078700 Sobic004G039400 Sobic004G039400 Sobic001G378200--Sobic004G039400 Sobic001G443200 Sobic001G443200 Sobic001G378200--Sobic001G443200 Sobic001G008100 Sobic001G008100 Sobic001G378200--Sobic001G008100 Sobic002G262200 Sobic002G262200 Sobic001G378200--Sobic002G262200 Sobic005G207400 Sobic005G207400 Sobic001G378200--Sobic005G207400
Octagon: transcription factors


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