Gene annotation
Transcriptome id Sobic.004G296700.1
Synonym Sb04g033070
Functional annotation ethylene-responsive element-binding protein, putative, expressed
UniProt C5XRZ7
Pfam PF05903
Panther DB PTHR12378 PTHR12378:SF14
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G47310 : PPPDE putative thiol peptidase family protein
RAP-DB (Rice) LOC_Os02g43840.1 : ethylene-responsive element-binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a020892
Brachypodium KQK00591 , KQK00590
Barley -
Wheat TraesCS6D02G225900 , TraesCS6D02G225900 , TraesCS6B02G280600 , TraesCS6A02G243700 , TraesCS6A02G243700
Populus -


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cDNA sequences
Sobic.004G296700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G199500 integral membrane protein, putative, expressed -
2 Sobic.007G192100 emp24/gp25L/p24 family protein, putative, expressed -
3 Sobic.007G117800 cytochrome b561, putative, expressed K08360: cytochrome b-561
4 Sobic.004G159000 cytochrome b-c1 complex subunit Rieske, mitochondrial precursor, putative, expressed K00411: UQCRFS1, RIP1, ubiquinol-cytochrome c reductase iron-sulfur subunit
5 Sobic.002G401700 TRAF-type zinc finger domain-containing protein 1, putative, expressed -
6 Sobic.010G028400 peptide methionine sulfoxide reductase, putative, expressed K07304: peptide-methionine (S)-S-oxide reductase
7 Sobic.003G382900 signal recognition particle 72 kDa protein, putative, expressed K03108: signal recognition particle subunit SRP72
8 Sobic.008G108500 histone deacetylase 6, putative, expressed -
9 Sobic.010G007400 peptidase, T1 family, putative, expressed K02739: 20S proteasome subunit beta 2
10 Sobic.003G340700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -
11 Sobic.004G186300 protein phosphotase protein, putative, expressed -
12 Sobic.006G222500 expressed protein -
13 Sobic.008G102600 expressed protein -
14 Sobic.008G140400 diacylglycerol kinase 1, putative, expressed K00901: dgkA, diacylglycerol kinase (ATP)
15 Sobic.002G090700 WD domain, G-beta repeat domain containing protein, expressed K14004: protein transport protein SEC13
16 Sobic.003G237400 plastidic ATP/ADP-transporter, putative, expressed K03301: ATP:ADP antiporter, AAA family
17 Sobic.002G399500 SNARE associated Golgi protein, putative, expressed -
18 Sobic.003G276100 ras-related protein, putative, expressed K07897: Ras-related protein Rab-7A
19 Sobic.001G443200 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3
20 Sobic.007G013900 rickettsia 17 kDa surface antigen family protein, expressed -


Gene co-expression network
sample Sobic004G296700 Sobic004G296700 Sobic003G199500 Sobic003G199500 Sobic004G296700--Sobic003G199500 Sobic007G192100 Sobic007G192100 Sobic004G296700--Sobic007G192100 Sobic007G117800 Sobic007G117800 Sobic004G296700--Sobic007G117800 Sobic004G159000 Sobic004G159000 Sobic004G296700--Sobic004G159000 Sobic002G401700 Sobic002G401700 Sobic004G296700--Sobic002G401700 Sobic010G028400 Sobic010G028400 Sobic004G296700--Sobic010G028400 Sobic003G382900 Sobic003G382900 Sobic004G296700--Sobic003G382900 Sobic008G108500 Sobic008G108500 Sobic004G296700--Sobic008G108500 Sobic010G007400 Sobic010G007400 Sobic004G296700--Sobic010G007400 Sobic007G056100 Sobic007G056100 Sobic003G199500--Sobic007G056100 Sobic003G199500--Sobic004G296700 Sobic001G313500 Sobic001G313500 Sobic003G199500--Sobic001G313500 Sobic010G243400 Sobic010G243400 Sobic003G199500--Sobic010G243400 Sobic009G160600 Sobic009G160600 Sobic003G199500--Sobic009G160600 Sobic002G355800 Sobic002G355800 Sobic003G199500--Sobic002G355800 Sobic008G140400 Sobic008G140400 Sobic003G199500--Sobic008G140400 Sobic001G421400 Sobic001G421400 Sobic003G199500--Sobic001G421400 Sobic001G378200 Sobic001G378200 Sobic003G199500--Sobic001G378200 Sobic007G192100--Sobic008G108500 Sobic001G036700 Sobic001G036700 Sobic007G192100--Sobic001G036700 Sobic001G402600 Sobic001G402600 Sobic007G192100--Sobic001G402600 Sobic002G176400 Sobic002G176400 Sobic007G192100--Sobic002G176400 Sobic001G126200 Sobic001G126200 Sobic007G192100--Sobic001G126200 Sobic007G038800 Sobic007G038800 Sobic007G192100--Sobic007G038800 Sobic001G392800 Sobic001G392800 Sobic007G192100--Sobic001G392800 Sobic002G399500 Sobic002G399500 Sobic007G192100--Sobic002G399500 Sobic007G192100--Sobic007G117800 Sobic003G148900 Sobic003G148900 Sobic007G117800--Sobic003G148900 Sobic001G443200 Sobic001G443200 Sobic007G117800--Sobic001G443200 Sobic007G117800--Sobic002G401700 Sobic003G276100 Sobic003G276100 Sobic007G117800--Sobic003G276100 Sobic007G012900 Sobic007G012900 Sobic007G117800--Sobic007G012900 Sobic005G184200 Sobic005G184200 Sobic007G117800--Sobic005G184200 Sobic007G117800--Sobic004G159000 Sobic003G200600 Sobic003G200600 Sobic007G117800--Sobic003G200600 Sobic002G262200 Sobic002G262200 Sobic007G117800--Sobic002G262200 Sobic007G013900 Sobic007G013900 Sobic004G159000--Sobic007G013900 Sobic004G344800 Sobic004G344800 Sobic004G159000--Sobic004G344800 Sobic004G159000--Sobic002G262200 Sobic004G030000 Sobic004G030000 Sobic004G159000--Sobic004G030000 Sobic003G196600 Sobic003G196600 Sobic004G159000--Sobic003G196600 Sobic002G090700 Sobic002G090700 Sobic004G159000--Sobic002G090700 Sobic003G152900 Sobic003G152900 Sobic004G159000--Sobic003G152900 Sobic002G260200 Sobic002G260200 Sobic004G159000--Sobic002G260200 Sobic004G159000--Sobic010G007400 Sobic002G401700--Sobic010G007400 Sobic002G401700--Sobic007G012900 Sobic002G401700--Sobic004G159000 Sobic002G401700--Sobic007G117800 Sobic001G050400 Sobic001G050400 Sobic002G401700--Sobic001G050400 Sobic003G116600 Sobic003G116600 Sobic002G401700--Sobic003G116600 Sobic002G401700--Sobic008G108500 Sobic002G276800 Sobic002G276800 Sobic002G401700--Sobic002G276800 Sobic002G401700--Sobic001G378200 Sobic001G343000 Sobic001G343000 Sobic010G028400--Sobic001G343000 Sobic001G347700 Sobic001G347700 Sobic010G028400--Sobic001G347700 Sobic003G167000 Sobic003G167000 Sobic010G028400--Sobic003G167000 Sobic007G208000 Sobic007G208000 Sobic010G028400--Sobic007G208000 Sobic007G048700 Sobic007G048700 Sobic010G028400--Sobic007G048700 Sobic007G201000 Sobic007G201000 Sobic010G028400--Sobic007G201000 Sobic004G017900 Sobic004G017900 Sobic010G028400--Sobic004G017900 Sobic001G188000 Sobic001G188000 Sobic010G028400--Sobic001G188000 Sobic003G260600 Sobic003G260600 Sobic010G028400--Sobic003G260600 Sobic003G382900--Sobic009G160600 Sobic003G382900--Sobic001G421400 Sobic010G238700 Sobic010G238700 Sobic003G382900--Sobic010G238700 Sobic006G225300 Sobic006G225300 Sobic003G382900--Sobic006G225300 Sobic003G382900--Sobic002G090700 Sobic003G382900--Sobic003G148900 Sobic001G161900 Sobic001G161900 Sobic003G382900--Sobic001G161900 Sobic006G222400 Sobic006G222400 Sobic003G382900--Sobic006G222400 Sobic003G038600 Sobic003G038600 Sobic003G382900--Sobic003G038600 Sobic008G108500--Sobic007G192100 Sobic008G108500--Sobic002G176400 Sobic003G189900 Sobic003G189900 Sobic008G108500--Sobic003G189900 Sobic008G108500--Sobic002G401700 Sobic008G108500--Sobic001G036700 Sobic008G108500--Sobic007G038800 Sobic004G122000 Sobic004G122000 Sobic008G108500--Sobic004G122000 Sobic008G108500--Sobic007G117800 Sobic009G086200 Sobic009G086200 Sobic008G108500--Sobic009G086200 Sobic010G007400--Sobic004G030000 Sobic010G007400--Sobic002G090700 Sobic010G007400--Sobic003G116600 Sobic010G007400--Sobic002G401700 Sobic010G007400--Sobic004G159000 Sobic001G031900 Sobic001G031900 Sobic010G007400--Sobic001G031900 Sobic010G007400--Sobic007G013900 Sobic010G007400--Sobic003G152900 Sobic001G074700 Sobic001G074700 Sobic010G007400--Sobic001G074700
Octagon: transcription factors


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