Gene annotation
Transcriptome id Sobic.002G399500.1
Synonym Sb02g041420
Functional annotation SNARE associated Golgi protein, putative, expressed
UniProt C5X434
Pfam PF09335
Panther DB PTHR12677
NCBI CDD KOG3140; Predicted membrane protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G03260 : SNARE associated Golgi protein family
RAP-DB (Rice) LOC_Os07g46220.1 : SNARE associated Golgi protein, putative, expressed
MaizeGDB (Corn) Zm00025a048984 , Zm00025a015330
Brachypodium KQK14898
Barley HORVU2Hr1G023710.6 , HORVU2Hr1G023710.5 , HORVU2Hr1G023710.4 , HORVU2Hr1G023710.1
Wheat TraesCS2D02G137100 , TraesCS2A02G134900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G192100 emp24/gp25L/p24 family protein, putative, expressed -
2 Sobic.001G061200 25.3 kDa vesicle transport protein, putative, expressed K08517: vesicle transport protein SEC22
3 Sobic.002G029300 pleckstrin homology domain-containing protein, putative, expressed -
4 Sobic.003G148900 translation machinery-associated protein 20, putative, expressed K07575: PUA domain protein
5 Sobic.002G040700 tetratricopeptide repeat, putative, expressed -
6 Sobic.001G122000 oxysterol-binding protein, putative, expressed -
7 Sobic.003G382900 signal recognition particle 72 kDa protein, putative, expressed K03108: signal recognition particle subunit SRP72
8 Sobic.001G036700 OsFBX442 - F-box domain containing protein, expressed -
9 Sobic.002G401700 TRAF-type zinc finger domain-containing protein 1, putative, expressed -
10 Sobic.004G000100 uridine/cytidine kinase-like 1, putative, expressed K00876: udk, uridine kinase
11 Sobic.007G173700 WD domain, G-beta repeat domain containing protein, expressed -
12 Sobic.009G160600 Yip1 domain containing protein, expressed -
13 Sobic.007G117800 cytochrome b561, putative, expressed K08360: cytochrome b-561
14 Sobic.001G402600 expressed protein -
15 Sobic.007G150000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
16 Sobic.001G443200 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3
17 Sobic.001G035400 ras-related protein, putative, expressed K07901: RAB8A, Ras-related protein Rab-8A
18 Sobic.001G013200 actin-related protein 2/3 complex subunit 4, putative, expressed K05755: actin related protein 2/3 complex, subunit 4
19 Sobic.010G238700 dynamin family protein, putative, expressed K12483: EH domain-containing protein 1
20 Sobic.002G176400 ubiquitin domain-containing protein 2, putative, expressed -


Gene co-expression network
sample Sobic002G399500 Sobic002G399500 Sobic007G192100 Sobic007G192100 Sobic002G399500--Sobic007G192100 Sobic001G061200 Sobic001G061200 Sobic002G399500--Sobic001G061200 Sobic002G029300 Sobic002G029300 Sobic002G399500--Sobic002G029300 Sobic003G148900 Sobic003G148900 Sobic002G399500--Sobic003G148900 Sobic002G040700 Sobic002G040700 Sobic002G399500--Sobic002G040700 Sobic001G122000 Sobic001G122000 Sobic002G399500--Sobic001G122000 Sobic003G382900 Sobic003G382900 Sobic002G399500--Sobic003G382900 Sobic001G036700 Sobic001G036700 Sobic002G399500--Sobic001G036700 Sobic002G401700 Sobic002G401700 Sobic002G399500--Sobic002G401700 Sobic008G108500 Sobic008G108500 Sobic007G192100--Sobic008G108500 Sobic007G192100--Sobic001G036700 Sobic001G402600 Sobic001G402600 Sobic007G192100--Sobic001G402600 Sobic002G176400 Sobic002G176400 Sobic007G192100--Sobic002G176400 Sobic001G126200 Sobic001G126200 Sobic007G192100--Sobic001G126200 Sobic007G038800 Sobic007G038800 Sobic007G192100--Sobic007G038800 Sobic001G392800 Sobic001G392800 Sobic007G192100--Sobic001G392800 Sobic007G192100--Sobic002G399500 Sobic007G117800 Sobic007G117800 Sobic007G192100--Sobic007G117800 Sobic001G193100 Sobic001G193100 Sobic001G061200--Sobic001G193100 Sobic007G173700 Sobic007G173700 Sobic001G061200--Sobic007G173700 Sobic003G222700 Sobic003G222700 Sobic001G061200--Sobic003G222700 Sobic009G207200 Sobic009G207200 Sobic001G061200--Sobic009G207200 Sobic008G129600 Sobic008G129600 Sobic001G061200--Sobic008G129600 Sobic002G276800 Sobic002G276800 Sobic001G061200--Sobic002G276800 Sobic001G061200--Sobic002G029300 Sobic001G061200--Sobic003G148900 Sobic001G023100 Sobic001G023100 Sobic001G061200--Sobic001G023100 Sobic002G029300--Sobic001G023100 Sobic002G029300--Sobic007G173700 Sobic004G031800 Sobic004G031800 Sobic002G029300--Sobic004G031800 Sobic008G072200 Sobic008G072200 Sobic002G029300--Sobic008G072200 Sobic001G010700 Sobic001G010700 Sobic002G029300--Sobic001G010700 Sobic009G226400 Sobic009G226400 Sobic002G029300--Sobic009G226400 Sobic001G161700 Sobic001G161700 Sobic002G029300--Sobic001G161700 Sobic002G141700 Sobic002G141700 Sobic002G029300--Sobic002G141700 Sobic006G056200 Sobic006G056200 Sobic002G029300--Sobic006G056200 Sobic003G200600 Sobic003G200600 Sobic003G148900--Sobic003G200600 Sobic003G148900--Sobic007G117800 Sobic002G027800 Sobic002G027800 Sobic003G148900--Sobic002G027800 Sobic007G012900 Sobic007G012900 Sobic003G148900--Sobic007G012900 Sobic008G110500 Sobic008G110500 Sobic003G148900--Sobic008G110500 Sobic002G423800 Sobic002G423800 Sobic003G148900--Sobic002G423800 Sobic001G421400 Sobic001G421400 Sobic003G148900--Sobic001G421400 Sobic003G128300 Sobic003G128300 Sobic003G148900--Sobic003G128300 Sobic003G224300 Sobic003G224300 Sobic003G148900--Sobic003G224300 Sobic001G512400 Sobic001G512400 Sobic002G040700--Sobic001G512400 Sobic001G439600 Sobic001G439600 Sobic002G040700--Sobic001G439600 Sobic008G165000 Sobic008G165000 Sobic002G040700--Sobic008G165000 Sobic001G105500 Sobic001G105500 Sobic002G040700--Sobic001G105500 Sobic007G118000 Sobic007G118000 Sobic002G040700--Sobic007G118000 Sobic004G010900 Sobic004G010900 Sobic002G040700--Sobic004G010900 Sobic003G116600 Sobic003G116600 Sobic002G040700--Sobic003G116600 Sobic001G048700 Sobic001G048700 Sobic002G040700--Sobic001G048700 Sobic001G367000 Sobic001G367000 Sobic002G040700--Sobic001G367000 Sobic001G122000--Sobic001G193100 Sobic003G270600 Sobic003G270600 Sobic001G122000--Sobic003G270600 Sobic008G140400 Sobic008G140400 Sobic001G122000--Sobic008G140400 Sobic004G236200 Sobic004G236200 Sobic001G122000--Sobic004G236200 Sobic004G228800 Sobic004G228800 Sobic001G122000--Sobic004G228800 Sobic003G394200 Sobic003G394200 Sobic001G122000--Sobic003G394200 Sobic002G431000 Sobic002G431000 Sobic001G122000--Sobic002G431000 Sobic001G122000--Sobic007G173700 Sobic001G005600 Sobic001G005600 Sobic001G122000--Sobic001G005600 Sobic009G160600 Sobic009G160600 Sobic003G382900--Sobic009G160600 Sobic003G382900--Sobic001G421400 Sobic010G238700 Sobic010G238700 Sobic003G382900--Sobic010G238700 Sobic006G225300 Sobic006G225300 Sobic003G382900--Sobic006G225300 Sobic002G090700 Sobic002G090700 Sobic003G382900--Sobic002G090700 Sobic003G382900--Sobic003G148900 Sobic001G161900 Sobic001G161900 Sobic003G382900--Sobic001G161900 Sobic006G222400 Sobic006G222400 Sobic003G382900--Sobic006G222400 Sobic003G038600 Sobic003G038600 Sobic003G382900--Sobic003G038600 Sobic001G532100 Sobic001G532100 Sobic001G036700--Sobic001G532100 Sobic001G036700--Sobic002G176400 Sobic001G036700--Sobic007G192100 Sobic001G285300 Sobic001G285300 Sobic001G036700--Sobic001G285300 Sobic006G094600 Sobic006G094600 Sobic001G036700--Sobic006G094600 Sobic001G036700--Sobic001G126200 Sobic003G131300 Sobic003G131300 Sobic001G036700--Sobic003G131300 Sobic003G420700 Sobic003G420700 Sobic001G036700--Sobic003G420700 Sobic009G086200 Sobic009G086200 Sobic001G036700--Sobic009G086200 Sobic010G007400 Sobic010G007400 Sobic002G401700--Sobic010G007400 Sobic002G401700--Sobic007G012900 Sobic004G159000 Sobic004G159000 Sobic002G401700--Sobic004G159000 Sobic002G401700--Sobic007G117800 Sobic001G050400 Sobic001G050400 Sobic002G401700--Sobic001G050400 Sobic002G401700--Sobic003G116600 Sobic002G401700--Sobic008G108500 Sobic002G401700--Sobic002G276800 Sobic001G378200 Sobic001G378200 Sobic002G401700--Sobic001G378200
Octagon: transcription factors


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