Gene annotation
Transcriptome id Sobic.001G511300.3
Synonym
Functional annotation expressed protein
UniProt A0A1B6QQM6
Pfam -
Panther DB PTHR33401 PTHR33401:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G55475 : -
RAP-DB (Rice) LOC_Os03g04545.1 : expressed protein
MaizeGDB (Corn) Zm00025a000536
Brachypodium -
Barley -
Wheat TraesCS4D02G334300 , TraesCS4B02G338000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G312500 protein phosphatase 2C, putative, expressed K14803: protein phosphatase PTC2/3
2 Sobic.001G313500 tobamovirus multiplication protein, putative, expressed -
3 Sobic.003G276100 ras-related protein, putative, expressed K07897: Ras-related protein Rab-7A
4 Sobic.001G008100 expressed protein K17966: transmembrane protein 70, mitochondrial
5 Sobic.001G050400 expressed protein -
6 Sobic.007G012900 50S ribosomal protein L19, chloroplast precursor, putative, expressed -
7 Sobic.001G378200 tetratricopeptide repeat domain containing protein, expressed -
8 Sobic.002G401700 TRAF-type zinc finger domain-containing protein 1, putative, expressed -
9 Sobic.003G202600 single myb histone, putative, expressed K09422: transcription factor MYB, plant
10 Sobic.003G200600 CBS domain containing membrane protein, putative, expressed -
11 Sobic.007G117800 cytochrome b561, putative, expressed K08360: cytochrome b-561
12 Sobic.001G421400 expressed protein -
13 Sobic.003G199500 integral membrane protein, putative, expressed -
14 Sobic.007G056100 expressed protein K15077: elongin-A
15 Sobic.001G214200 lysM domain containing protein, putative, expressed -
16 Sobic.003G346500 similar to Nuclear transcription factor Y subunit B-3(PubMedID : 29862293)@tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed K08065: NFYB, nuclear transcription Y subunit beta
17 Sobic.001G095000 CorA-like magnesium transporter protein, putative, expressed K16075: MRS2, magnesium transporter
18 Sobic.003G308400 expressed protein -
19 Sobic.006G041800 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
20 Sobic.003G102600 K-dependent Na/Ca exchanger(PubMedID : 22196357)@sodium/calcium exchanger protein, putative, expressed K13754: SLC24A6, solute carrier family 24 (sodium/potassium/calcium exchanger), member 6


Gene co-expression network
sample Sobic001G511300 Sobic001G511300 Sobic001G312500 Sobic001G312500 Sobic001G511300--Sobic001G312500 Sobic001G313500 Sobic001G313500 Sobic001G511300--Sobic001G313500 Sobic003G276100 Sobic003G276100 Sobic001G511300--Sobic003G276100 Sobic001G008100 Sobic001G008100 Sobic001G511300--Sobic001G008100 Sobic001G050400 Sobic001G050400 Sobic001G511300--Sobic001G050400 Sobic007G012900 Sobic007G012900 Sobic001G511300--Sobic007G012900 Sobic001G378200 Sobic001G378200 Sobic001G511300--Sobic001G378200 Sobic002G401700 Sobic002G401700 Sobic001G511300--Sobic002G401700 Sobic003G202600 Sobic003G202600 Sobic001G511300--Sobic003G202600 Sobic001G312500--Sobic001G511300 Sobic006G217300 Sobic006G217300 Sobic001G312500--Sobic006G217300 Sobic001G312500--Sobic001G378200 Sobic001G312500--Sobic003G202600 Sobic005G207400 Sobic005G207400 Sobic001G312500--Sobic005G207400 Sobic004G100200 Sobic004G100200 Sobic001G312500--Sobic004G100200 Sobic007G026800 Sobic007G026800 Sobic001G312500--Sobic007G026800 Sobic003G043800 Sobic003G043800 Sobic001G312500--Sobic003G043800 Sobic002G214400 Sobic002G214400 Sobic001G312500--Sobic002G214400 Sobic001G421400 Sobic001G421400 Sobic001G313500--Sobic001G421400 Sobic001G512400 Sobic001G512400 Sobic001G313500--Sobic001G512400 Sobic001G085900 Sobic001G085900 Sobic001G313500--Sobic001G085900 Sobic002G385900 Sobic002G385900 Sobic001G313500--Sobic002G385900 Sobic001G161900 Sobic001G161900 Sobic001G313500--Sobic001G161900 Sobic010G129600 Sobic010G129600 Sobic001G313500--Sobic010G129600 Sobic009G135600 Sobic009G135600 Sobic001G313500--Sobic009G135600 Sobic010G261600 Sobic010G261600 Sobic001G313500--Sobic010G261600 Sobic004G039300 Sobic004G039300 Sobic001G313500--Sobic004G039300 Sobic003G276100--Sobic007G012900 Sobic006G041800 Sobic006G041800 Sobic003G276100--Sobic006G041800 Sobic003G276100--Sobic001G008100 Sobic007G119600 Sobic007G119600 Sobic003G276100--Sobic007G119600 Sobic001G443200 Sobic001G443200 Sobic003G276100--Sobic001G443200 Sobic009G191400 Sobic009G191400 Sobic003G276100--Sobic009G191400 Sobic001G387200 Sobic001G387200 Sobic003G276100--Sobic001G387200 Sobic001G178500 Sobic001G178500 Sobic003G276100--Sobic001G178500 Sobic007G117800 Sobic007G117800 Sobic003G276100--Sobic007G117800 Sobic004G039400 Sobic004G039400 Sobic001G008100--Sobic004G039400 Sobic001G008100--Sobic006G041800 Sobic001G465400 Sobic001G465400 Sobic001G008100--Sobic001G465400 Sobic010G040900 Sobic010G040900 Sobic001G008100--Sobic010G040900 Sobic001G387800 Sobic001G387800 Sobic001G008100--Sobic001G387800 Sobic001G008100--Sobic003G276100 Sobic002G079700 Sobic002G079700 Sobic001G008100--Sobic002G079700 Sobic001G008100--Sobic009G191400 Sobic002G276800 Sobic002G276800 Sobic001G008100--Sobic002G276800 Sobic001G050400--Sobic004G039400 Sobic001G050400--Sobic002G401700 Sobic001G050400--Sobic007G012900 Sobic001G050400--Sobic001G008100 Sobic001G214200 Sobic001G214200 Sobic001G050400--Sobic001G214200 Sobic001G050400--Sobic001G178500 Sobic001G050400--Sobic001G443200 Sobic002G262200 Sobic002G262200 Sobic001G050400--Sobic002G262200 Sobic001G050400--Sobic010G040900 Sobic001G181500 Sobic001G181500 Sobic007G012900--Sobic001G181500 Sobic007G012900--Sobic003G276100 Sobic007G012900--Sobic002G401700 Sobic007G012900--Sobic001G008100 Sobic007G012900--Sobic006G041800 Sobic003G148900 Sobic003G148900 Sobic007G012900--Sobic003G148900 Sobic003G135600 Sobic003G135600 Sobic007G012900--Sobic003G135600 Sobic007G012900--Sobic009G191400 Sobic007G012900--Sobic002G079700 Sobic001G378200--Sobic001G465400 Sobic001G112400 Sobic001G112400 Sobic001G378200--Sobic001G112400 Sobic006G012700 Sobic006G012700 Sobic001G378200--Sobic006G012700 Sobic004G078700 Sobic004G078700 Sobic001G378200--Sobic004G078700 Sobic001G378200--Sobic004G039400 Sobic001G378200--Sobic001G443200 Sobic001G378200--Sobic001G008100 Sobic001G378200--Sobic002G262200 Sobic001G378200--Sobic005G207400 Sobic010G007400 Sobic010G007400 Sobic002G401700--Sobic010G007400 Sobic002G401700--Sobic007G012900 Sobic004G159000 Sobic004G159000 Sobic002G401700--Sobic004G159000 Sobic002G401700--Sobic007G117800 Sobic002G401700--Sobic001G050400 Sobic003G116600 Sobic003G116600 Sobic002G401700--Sobic003G116600 Sobic008G108500 Sobic008G108500 Sobic002G401700--Sobic008G108500 Sobic002G401700--Sobic002G276800 Sobic002G401700--Sobic001G378200 Sobic001G095000 Sobic001G095000 Sobic003G202600--Sobic001G095000 Sobic002G079000 Sobic002G079000 Sobic003G202600--Sobic002G079000 Sobic002G355800 Sobic002G355800 Sobic003G202600--Sobic002G355800 Sobic007G087000 Sobic007G087000 Sobic003G202600--Sobic007G087000 Sobic001G237600 Sobic001G237600 Sobic003G202600--Sobic001G237600 Sobic010G169900 Sobic010G169900 Sobic003G202600--Sobic010G169900 Sobic001G389200 Sobic001G389200 Sobic003G202600--Sobic001G389200 Sobic006G060000 Sobic006G060000 Sobic003G202600--Sobic006G060000 Sobic003G302200 Sobic003G302200 Sobic003G202600--Sobic003G302200
Octagon: transcription factors


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