Gene annotation
Transcriptome id Sobic.001G050400.1,Sobic.001G050400.3,Sobic.001G050400.2
Synonym Sb01g004620
Functional annotation expressed protein
UniProt A0A1Z5S4X8 , C5WX04
Pfam -
Panther DB PTHR35465
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G20890 : -
RAP-DB (Rice) LOC_Os03g58930.1 : expressed protein
MaizeGDB (Corn) Zm00025a016533 , Zm00025a008625
Brachypodium KQK12619 , KQK12620 , KQK12621
Barley HORVU5Hr1G108970.12 , HORVU5Hr1G108970.13 , HORVU5Hr1G108970.10 , HORVU5Hr1G108970.11 , HORVU5Hr1G108970.14 , HORVU5Hr1G108970.1 , HORVU5Hr1G108970.2 , HORVU5Hr1G108970.3 , HORVU5Hr1G108970.4 , HORVU5Hr1G108970.5 , HORVU5Hr1G108970.6 , HORVU5Hr1G108970.7 , HORVU5Hr1G108970.8 , HORVU5Hr1G108970.9
Wheat TraesCS5D02G462900 , TraesCS5B02G461400 , TraesCS5B02G461400 , TraesCS5D02G462900 , TraesCS6A02G230000 , TraesCS5A02G452500 , TraesCS5A02G452500 , TraesCS6A02G230000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G039400 Constitutively expressed genes(PubMedID : 24456189)@- K03257: translation initiation factor 4A
2 Sobic.002G401700 TRAF-type zinc finger domain-containing protein 1, putative, expressed -
3 Sobic.007G012900 50S ribosomal protein L19, chloroplast precursor, putative, expressed -
4 Sobic.001G008100 expressed protein K17966: transmembrane protein 70, mitochondrial
5 Sobic.001G214200 lysM domain containing protein, putative, expressed -
6 Sobic.001G178500 chloroplast 30S ribosomal protein S19, putative, expressed K02965: RP-S19, small subunit ribosomal protein S19
7 Sobic.001G443200 transmembrane 9 superfamily member, putative, expressed K17087: transmembrane 9 superfamily member 3
8 Sobic.002G262200 expressed protein -
9 Sobic.010G040900 trafficking protein particle complex subunit 4, putative, expressed -
10 Sobic.003G196600 expressed protein -
11 Sobic.003G148900 translation machinery-associated protein 20, putative, expressed K07575: PUA domain protein
12 Sobic.009G112900 expressed protein K18170: LYRM7, complex III assembly factor LYRM7
13 Sobic.004G159000 cytochrome b-c1 complex subunit Rieske, mitochondrial precursor, putative, expressed K00411: UQCRFS1, RIP1, ubiquinol-cytochrome c reductase iron-sulfur subunit
14 Sobic.003G276100 ras-related protein, putative, expressed K07897: Ras-related protein Rab-7A
15 Sobic.008G110500 UDP-N-acetylglucosamine transferase subunit ALG13, putative, expressed K07432: beta-1,4-N-acetylglucosaminyltransferase
16 Sobic.004G337300 expressed protein -
17 Sobic.001G511300 expressed protein -
18 Sobic.007G003100 transmembrane protein 18, putative, expressed -
19 Sobic.004G344800 NADH dehydrogenase 1 alpha subcomplex subunit 9,mitochondrial precursor, putative, expressed K03953: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 9
20 Sobic.001G181500 expressed protein -


Gene co-expression network
sample Sobic001G050400 Sobic001G050400 Sobic004G039400 Sobic004G039400 Sobic001G050400--Sobic004G039400 Sobic002G401700 Sobic002G401700 Sobic001G050400--Sobic002G401700 Sobic007G012900 Sobic007G012900 Sobic001G050400--Sobic007G012900 Sobic001G008100 Sobic001G008100 Sobic001G050400--Sobic001G008100 Sobic001G214200 Sobic001G214200 Sobic001G050400--Sobic001G214200 Sobic001G178500 Sobic001G178500 Sobic001G050400--Sobic001G178500 Sobic001G443200 Sobic001G443200 Sobic001G050400--Sobic001G443200 Sobic002G262200 Sobic002G262200 Sobic001G050400--Sobic002G262200 Sobic010G040900 Sobic010G040900 Sobic001G050400--Sobic010G040900 Sobic004G039400--Sobic001G008100 Sobic001G073600 Sobic001G073600 Sobic004G039400--Sobic001G073600 Sobic004G039400--Sobic010G040900 Sobic004G039400--Sobic001G443200 Sobic004G039400--Sobic002G262200 Sobic009G191400 Sobic009G191400 Sobic004G039400--Sobic009G191400 Sobic004G344800 Sobic004G344800 Sobic004G039400--Sobic004G344800 Sobic001G387200 Sobic001G387200 Sobic004G039400--Sobic001G387200 Sobic002G079700 Sobic002G079700 Sobic004G039400--Sobic002G079700 Sobic010G007400 Sobic010G007400 Sobic002G401700--Sobic010G007400 Sobic002G401700--Sobic007G012900 Sobic004G159000 Sobic004G159000 Sobic002G401700--Sobic004G159000 Sobic007G117800 Sobic007G117800 Sobic002G401700--Sobic007G117800 Sobic002G401700--Sobic001G050400 Sobic003G116600 Sobic003G116600 Sobic002G401700--Sobic003G116600 Sobic008G108500 Sobic008G108500 Sobic002G401700--Sobic008G108500 Sobic002G276800 Sobic002G276800 Sobic002G401700--Sobic002G276800 Sobic001G378200 Sobic001G378200 Sobic002G401700--Sobic001G378200 Sobic001G181500 Sobic001G181500 Sobic007G012900--Sobic001G181500 Sobic003G276100 Sobic003G276100 Sobic007G012900--Sobic003G276100 Sobic007G012900--Sobic002G401700 Sobic007G012900--Sobic001G008100 Sobic006G041800 Sobic006G041800 Sobic007G012900--Sobic006G041800 Sobic003G148900 Sobic003G148900 Sobic007G012900--Sobic003G148900 Sobic003G135600 Sobic003G135600 Sobic007G012900--Sobic003G135600 Sobic007G012900--Sobic009G191400 Sobic007G012900--Sobic002G079700 Sobic001G008100--Sobic004G039400 Sobic001G008100--Sobic006G041800 Sobic001G465400 Sobic001G465400 Sobic001G008100--Sobic001G465400 Sobic001G008100--Sobic010G040900 Sobic001G387800 Sobic001G387800 Sobic001G008100--Sobic001G387800 Sobic001G008100--Sobic003G276100 Sobic001G008100--Sobic002G079700 Sobic001G008100--Sobic009G191400 Sobic001G008100--Sobic002G276800 Sobic010G026700 Sobic010G026700 Sobic001G214200--Sobic010G026700 Sobic001G122500 Sobic001G122500 Sobic001G214200--Sobic001G122500 Sobic001G214200--Sobic001G050400 Sobic003G023500 Sobic003G023500 Sobic001G214200--Sobic003G023500 Sobic002G395600 Sobic002G395600 Sobic001G214200--Sobic002G395600 Sobic001G408100 Sobic001G408100 Sobic001G214200--Sobic001G408100 Sobic010G017000 Sobic010G017000 Sobic001G214200--Sobic010G017000 Sobic002G214900 Sobic002G214900 Sobic001G214200--Sobic002G214900 Sobic010G235200 Sobic010G235200 Sobic001G214200--Sobic010G235200 Sobic001G178500--Sobic002G079700 Sobic001G178500--Sobic001G387800 Sobic001G060300 Sobic001G060300 Sobic001G178500--Sobic001G060300 Sobic001G178500--Sobic010G040900 Sobic007G119600 Sobic007G119600 Sobic001G178500--Sobic007G119600 Sobic001G178500--Sobic003G135600 Sobic001G178500--Sobic009G191400 Sobic007G171500 Sobic007G171500 Sobic001G178500--Sobic007G171500 Sobic001G178500--Sobic001G443200 Sobic008G102600 Sobic008G102600 Sobic001G443200--Sobic008G102600 Sobic004G000100 Sobic004G000100 Sobic001G443200--Sobic004G000100 Sobic001G443200--Sobic004G039400 Sobic001G112400 Sobic001G112400 Sobic001G443200--Sobic001G112400 Sobic001G443200--Sobic004G344800 Sobic002G141700 Sobic002G141700 Sobic001G443200--Sobic002G141700 Sobic001G443200--Sobic010G040900 Sobic001G443200--Sobic001G073600 Sobic001G443200--Sobic002G262200 Sobic002G262200--Sobic004G159000 Sobic009G224400 Sobic009G224400 Sobic002G262200--Sobic009G224400 Sobic002G395000 Sobic002G395000 Sobic002G262200--Sobic002G395000 Sobic002G262200--Sobic003G135600 Sobic002G262200--Sobic004G344800 Sobic002G262200--Sobic001G073600 Sobic002G262200--Sobic001G112400 Sobic007G013900 Sobic007G013900 Sobic002G262200--Sobic007G013900 Sobic002G262200--Sobic009G191400 Sobic010G040900--Sobic004G039400 Sobic010G040900--Sobic001G443200 Sobic010G040900--Sobic009G191400 Sobic010G040900--Sobic001G008100 Sobic010G040900--Sobic001G178500 Sobic006G126000 Sobic006G126000 Sobic010G040900--Sobic006G126000 Sobic003G261800 Sobic003G261800 Sobic010G040900--Sobic003G261800 Sobic010G040900--Sobic003G135600 Sobic010G040900--Sobic004G344800
Octagon: transcription factors


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