Gene annotation
Transcriptome id Sobic.004G337300.1
Synonym Sb04g036500
Functional annotation expressed protein
UniProt C5XV60
Pfam -
Panther DB PTHR37215
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G37195 : -
RAP-DB (Rice) LOC_Os02g56190.1 : expressed protein
MaizeGDB (Corn) Zm00025a022525 , Zm00025a032877
Brachypodium PNT69398
Barley -
Wheat TraesCS6D02G358300
Populus -


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cDNA sequences
Sobic.004G337300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G357900 expressed protein -
2 Sobic.001G050400 expressed protein -
3 Sobic.001G061200 25.3 kDa vesicle transport protein, putative, expressed K08517: vesicle transport protein SEC22
4 Sobic.003G190600 vesicle transport v-SNARE protein, putative, expressed K08493: vesicle transport through interaction with t-SNAREs 1
5 Sobic.008G140400 diacylglycerol kinase 1, putative, expressed K00901: dgkA, diacylglycerol kinase (ATP)
6 Sobic.002G401700 TRAF-type zinc finger domain-containing protein 1, putative, expressed -
7 Sobic.003G006200 ubiquitin-conjugating enzyme E2, putative, expressed K10581: ubiquitin-conjugating enzyme E2 O
8 Sobic.002G267400 POLD4A - Putative DNA polymerase delta complex subunit, expressed K03505: DNA polymerase delta subunit 4
9 Sobic.001G005600 CBS domain containing membrane protein, putative, expressed -
10 Sobic.001G378200 tetratricopeptide repeat domain containing protein, expressed -
11 Sobic.003G038600 phosducin-like protein 3, putative, expressed -
12 Sobic.002G422400 adenylate cyclase family protein, expressed -
13 Sobic.003G148900 translation machinery-associated protein 20, putative, expressed K07575: PUA domain protein
14 Sobic.003G122400 expressed protein -
15 Sobic.001G122000 oxysterol-binding protein, putative, expressed -
16 Sobic.007G148400 cyclin-dependent kinase C-3, putative, expressed K08819: cyclin-dependent kinase 12/13
17 Sobic.003G202600 single myb histone, putative, expressed K09422: transcription factor MYB, plant
18 Sobic.003G062400 PHD finger protein, putative, expressed -
19 Sobic.001G312500 protein phosphatase 2C, putative, expressed K14803: protein phosphatase PTC2/3
20 Sobic.009G160600 Yip1 domain containing protein, expressed -


Gene co-expression network
sample Sobic004G337300 Sobic004G337300 Sobic002G357900 Sobic002G357900 Sobic004G337300--Sobic002G357900 Sobic001G050400 Sobic001G050400 Sobic004G337300--Sobic001G050400 Sobic001G061200 Sobic001G061200 Sobic004G337300--Sobic001G061200 Sobic003G190600 Sobic003G190600 Sobic004G337300--Sobic003G190600 Sobic008G140400 Sobic008G140400 Sobic004G337300--Sobic008G140400 Sobic002G401700 Sobic002G401700 Sobic004G337300--Sobic002G401700 Sobic003G006200 Sobic003G006200 Sobic004G337300--Sobic003G006200 Sobic002G267400 Sobic002G267400 Sobic004G337300--Sobic002G267400 Sobic001G005600 Sobic001G005600 Sobic004G337300--Sobic001G005600 Sobic002G357900--Sobic004G337300 Sobic003G148900 Sobic003G148900 Sobic002G357900--Sobic003G148900 Sobic003G222700 Sobic003G222700 Sobic002G357900--Sobic003G222700 Sobic002G357900--Sobic001G061200 Sobic002G357900--Sobic002G267400 Sobic002G357900--Sobic008G140400 Sobic003G062400 Sobic003G062400 Sobic002G357900--Sobic003G062400 Sobic003G038600 Sobic003G038600 Sobic002G357900--Sobic003G038600 Sobic002G029300 Sobic002G029300 Sobic002G357900--Sobic002G029300 Sobic004G039400 Sobic004G039400 Sobic001G050400--Sobic004G039400 Sobic001G050400--Sobic002G401700 Sobic007G012900 Sobic007G012900 Sobic001G050400--Sobic007G012900 Sobic001G008100 Sobic001G008100 Sobic001G050400--Sobic001G008100 Sobic001G214200 Sobic001G214200 Sobic001G050400--Sobic001G214200 Sobic001G178500 Sobic001G178500 Sobic001G050400--Sobic001G178500 Sobic001G443200 Sobic001G443200 Sobic001G050400--Sobic001G443200 Sobic002G262200 Sobic002G262200 Sobic001G050400--Sobic002G262200 Sobic010G040900 Sobic010G040900 Sobic001G050400--Sobic010G040900 Sobic001G193100 Sobic001G193100 Sobic001G061200--Sobic001G193100 Sobic007G173700 Sobic007G173700 Sobic001G061200--Sobic007G173700 Sobic001G061200--Sobic003G222700 Sobic009G207200 Sobic009G207200 Sobic001G061200--Sobic009G207200 Sobic008G129600 Sobic008G129600 Sobic001G061200--Sobic008G129600 Sobic002G276800 Sobic002G276800 Sobic001G061200--Sobic002G276800 Sobic001G061200--Sobic002G029300 Sobic001G061200--Sobic003G148900 Sobic001G023100 Sobic001G023100 Sobic001G061200--Sobic001G023100 Sobic002G395500 Sobic002G395500 Sobic003G190600--Sobic002G395500 Sobic001G389200 Sobic001G389200 Sobic003G190600--Sobic001G389200 Sobic002G023100 Sobic002G023100 Sobic003G190600--Sobic002G023100 Sobic001G378200 Sobic001G378200 Sobic003G190600--Sobic001G378200 Sobic001G485300 Sobic001G485300 Sobic003G190600--Sobic001G485300 Sobic007G118500 Sobic007G118500 Sobic003G190600--Sobic007G118500 Sobic006G012700 Sobic006G012700 Sobic003G190600--Sobic006G012700 Sobic004G060300 Sobic004G060300 Sobic003G190600--Sobic004G060300 Sobic001G047600 Sobic001G047600 Sobic003G190600--Sobic001G047600 Sobic008G140400--Sobic001G005600 Sobic008G140400--Sobic007G173700 Sobic006G222500 Sobic006G222500 Sobic008G140400--Sobic006G222500 Sobic001G122000 Sobic001G122000 Sobic008G140400--Sobic001G122000 Sobic008G140400--Sobic001G023100 Sobic002G419000 Sobic002G419000 Sobic008G140400--Sobic002G419000 Sobic008G140400--Sobic002G357900 Sobic008G140400--Sobic001G193100 Sobic003G199500 Sobic003G199500 Sobic008G140400--Sobic003G199500 Sobic010G007400 Sobic010G007400 Sobic002G401700--Sobic010G007400 Sobic002G401700--Sobic007G012900 Sobic004G159000 Sobic004G159000 Sobic002G401700--Sobic004G159000 Sobic007G117800 Sobic007G117800 Sobic002G401700--Sobic007G117800 Sobic002G401700--Sobic001G050400 Sobic003G116600 Sobic003G116600 Sobic002G401700--Sobic003G116600 Sobic008G108500 Sobic008G108500 Sobic002G401700--Sobic008G108500 Sobic002G401700--Sobic002G276800 Sobic002G401700--Sobic001G378200 Sobic007G081900 Sobic007G081900 Sobic003G006200--Sobic007G081900 Sobic003G006200--Sobic004G337300 Sobic008G058800 Sobic008G058800 Sobic003G006200--Sobic008G058800 Sobic009G125000 Sobic009G125000 Sobic003G006200--Sobic009G125000 Sobic003G212900 Sobic003G212900 Sobic003G006200--Sobic003G212900 Sobic003G006200--Sobic002G267400 Sobic006G219000 Sobic006G219000 Sobic003G006200--Sobic006G219000 Sobic007G056500 Sobic007G056500 Sobic003G006200--Sobic007G056500 Sobic009G059400 Sobic009G059400 Sobic003G006200--Sobic009G059400 Sobic002G267400--Sobic003G148900 Sobic002G059000 Sobic002G059000 Sobic002G267400--Sobic002G059000 Sobic002G267400--Sobic002G357900 Sobic007G192100 Sobic007G192100 Sobic002G267400--Sobic007G192100 Sobic001G036700 Sobic001G036700 Sobic002G267400--Sobic001G036700 Sobic008G111800 Sobic008G111800 Sobic002G267400--Sobic008G111800 Sobic002G267400--Sobic003G062400 Sobic004G256300 Sobic004G256300 Sobic002G267400--Sobic004G256300 Sobic002G267400--Sobic007G081900 Sobic009G160600 Sobic009G160600 Sobic001G005600--Sobic009G160600 Sobic010G129600 Sobic010G129600 Sobic001G005600--Sobic010G129600 Sobic007G042900 Sobic007G042900 Sobic001G005600--Sobic007G042900 Sobic001G005600--Sobic008G140400 Sobic003G150900 Sobic003G150900 Sobic001G005600--Sobic003G150900 Sobic004G323700 Sobic004G323700 Sobic001G005600--Sobic004G323700 Sobic004G068500 Sobic004G068500 Sobic001G005600--Sobic004G068500 Sobic008G021000 Sobic008G021000 Sobic001G005600--Sobic008G021000 Sobic001G161900 Sobic001G161900 Sobic001G005600--Sobic001G161900
Octagon: transcription factors


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