Gene annotation
Transcriptome id Sobic.007G026800.1
Synonym ATARP3, Sb07g002350, ARP3, DIS1
Functional annotation actin, putative, expressed
UniProt A0A1B6PF59
Pfam PF00022
Panther DB PTHR11937 PTHR11937:SF258
NCBI CDD -
KEGG Orthology K18584; ACTR3, actin-related protein 3
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G13180 : Actin-like ATPase superfamily protein
RAP-DB (Rice) LOC_Os08g03440.1 : actin, putative, expressed
MaizeGDB (Corn) Zm00025a040365
Brachypodium KQJ94938 , KQJ94937 , KQJ94936 , PNT66578 , PNT66579
Barley HORVU7Hr1G074460.4 , HORVU7Hr1G074460.5 , HORVU7Hr1G074460.6 , HORVU7Hr1G074460.7 , HORVU7Hr1G074460.2 , HORVU7Hr1G074460.3
Wheat TraesCS7B02G211500 , TraesCS7B02G211500 , TraesCS7B02G211500 , TraesCS7D02G308200 , TraesCS7D02G308200 , TraesCS7A02G311700 , TraesCS7A02G311700 , TraesCS7A02G311700 , TraesCS7A02G311700
Populus PNT25381 , PNT25382 , PNT25383 , PNT14833 , PNT14834


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G217300 NAD dependent epimerase/dehydratase family domain containing protein, expressed K12448: UXE, UDP-arabinose 4-epimerase
2 Sobic.003G377000 powdery mildew resistant protein 5, putative, expressed -
3 Sobic.005G177700 transmembrane protein 49, putative, expressed -
4 Sobic.010G064600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@LIM domain-containing protein, putative, expressed -
5 Sobic.007G056100 expressed protein K15077: elongin-A
6 Sobic.001G312500 protein phosphatase 2C, putative, expressed K14803: protein phosphatase PTC2/3
7 Sobic.004G228800 LMBR1 integral membrane protein, putative, expressed -
8 Sobic.009G072700 O-acyltransferase, putative, expressed K11155: diacylglycerol O-acyltransferase 1
9 Sobic.002G431000 transporter, putative, expressed -
10 Sobic.004G100200 protein phosphatase 1 regulatory subunit SDS22, putative, expressed K17550: PPP1R7, protein phosphatase 1 regulatory subunit 7
11 Sobic.003G316200 transmembrane protein 49, putative, expressed -
12 Sobic.001G122500 SNARE associated Golgi protein, putative, expressed -
13 Sobic.010G184300 glycosyltransferase family protein, putative, expressed K00771: protein xylosyltransferase
14 Sobic.003G302200 2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
15 Sobic.001G313500 tobamovirus multiplication protein, putative, expressed -
16 Sobic.004G078700 tubulin binding cofactor C, putative, expressed K16810: TBCC domain-containing protein 1
17 Sobic.006G260500 expressed protein -
18 Sobic.002G268800 arsenical pump-driving ATPase, putative, expressed K01551: arsA, ASNA1, arsenite/tail-anchored protein-transporting ATPase
19 Sobic.001G188400 tobamovirus multiplication protein, putative, expressed -
20 Sobic.003G346500 similar to Nuclear transcription factor Y subunit B-3(PubMedID : 29862293)@tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed K08065: NFYB, nuclear transcription Y subunit beta


Gene co-expression network
sample Sobic007G026800 Sobic007G026800 Sobic006G217300 Sobic006G217300 Sobic007G026800--Sobic006G217300 Sobic003G377000 Sobic003G377000 Sobic007G026800--Sobic003G377000 Sobic005G177700 Sobic005G177700 Sobic007G026800--Sobic005G177700 Sobic010G064600 Sobic010G064600 Sobic007G026800--Sobic010G064600 Sobic007G056100 Sobic007G056100 Sobic007G026800--Sobic007G056100 Sobic001G312500 Sobic001G312500 Sobic007G026800--Sobic001G312500 Sobic004G228800 Sobic004G228800 Sobic007G026800--Sobic004G228800 Sobic009G072700 Sobic009G072700 Sobic007G026800--Sobic009G072700 Sobic002G431000 Sobic002G431000 Sobic007G026800--Sobic002G431000 Sobic001G122500 Sobic001G122500 Sobic006G217300--Sobic001G122500 Sobic006G207900 Sobic006G207900 Sobic006G217300--Sobic006G207900 Sobic006G217300--Sobic007G026800 Sobic003G043800 Sobic003G043800 Sobic006G217300--Sobic003G043800 Sobic006G217300--Sobic010G064600 Sobic006G217300--Sobic001G312500 Sobic006G217300--Sobic002G431000 Sobic010G184300 Sobic010G184300 Sobic006G217300--Sobic010G184300 Sobic006G217300--Sobic004G228800 Sobic002G265300 Sobic002G265300 Sobic003G377000--Sobic002G265300 Sobic003G377000--Sobic002G431000 Sobic002G139600 Sobic002G139600 Sobic003G377000--Sobic002G139600 Sobic003G377000--Sobic005G177700 Sobic003G377000--Sobic007G026800 Sobic003G377000--Sobic010G184300 Sobic004G093600 Sobic004G093600 Sobic003G377000--Sobic004G093600 Sobic004G096700 Sobic004G096700 Sobic003G377000--Sobic004G096700 SobicK043400 SobicK043400 Sobic003G377000--SobicK043400 Sobic003G316200 Sobic003G316200 Sobic005G177700--Sobic003G316200 Sobic005G177700--Sobic007G056100 Sobic002G355800 Sobic002G355800 Sobic005G177700--Sobic002G355800 Sobic006G077300 Sobic006G077300 Sobic005G177700--Sobic006G077300 Sobic009G041700 Sobic009G041700 Sobic005G177700--Sobic009G041700 Sobic001G253300 Sobic001G253300 Sobic005G177700--Sobic001G253300 Sobic005G177700--Sobic004G228800 Sobic003G365100 Sobic003G365100 Sobic005G177700--Sobic003G365100 Sobic002G268800 Sobic002G268800 Sobic005G177700--Sobic002G268800 Sobic003G087000 Sobic003G087000 Sobic010G064600--Sobic003G087000 Sobic008G093000 Sobic008G093000 Sobic010G064600--Sobic008G093000 Sobic010G261600 Sobic010G261600 Sobic010G064600--Sobic010G261600 Sobic010G064600--Sobic004G228800 Sobic010G064600--Sobic010G184300 Sobic006G281800 Sobic006G281800 Sobic010G064600--Sobic006G281800 Sobic010G064600--Sobic009G072700 Sobic001G089800 Sobic001G089800 Sobic010G064600--Sobic001G089800 Sobic001G003000 Sobic001G003000 Sobic010G064600--Sobic001G003000 Sobic007G056100--Sobic005G177700 Sobic010G243400 Sobic010G243400 Sobic007G056100--Sobic010G243400 Sobic007G056100--Sobic002G355800 Sobic009G224000 Sobic009G224000 Sobic007G056100--Sobic009G224000 Sobic003G199500 Sobic003G199500 Sobic007G056100--Sobic003G199500 Sobic001G421400 Sobic001G421400 Sobic007G056100--Sobic001G421400 Sobic007G056100--Sobic010G261600 Sobic002G303600 Sobic002G303600 Sobic007G056100--Sobic002G303600 Sobic001G465400 Sobic001G465400 Sobic007G056100--Sobic001G465400 Sobic001G511300 Sobic001G511300 Sobic001G312500--Sobic001G511300 Sobic001G312500--Sobic006G217300 Sobic001G378200 Sobic001G378200 Sobic001G312500--Sobic001G378200 Sobic003G202600 Sobic003G202600 Sobic001G312500--Sobic003G202600 Sobic005G207400 Sobic005G207400 Sobic001G312500--Sobic005G207400 Sobic004G100200 Sobic004G100200 Sobic001G312500--Sobic004G100200 Sobic001G312500--Sobic007G026800 Sobic001G312500--Sobic003G043800 Sobic002G214400 Sobic002G214400 Sobic001G312500--Sobic002G214400 Sobic004G261600 Sobic004G261600 Sobic004G228800--Sobic004G261600 Sobic004G228800--Sobic010G261600 Sobic004G323700 Sobic004G323700 Sobic004G228800--Sobic004G323700 Sobic010G278200 Sobic010G278200 Sobic004G228800--Sobic010G278200 Sobic004G236200 Sobic004G236200 Sobic004G228800--Sobic004G236200 Sobic006G131000 Sobic006G131000 Sobic004G228800--Sobic006G131000 Sobic004G228800--Sobic005G177700 Sobic007G056600 Sobic007G056600 Sobic004G228800--Sobic007G056600 Sobic003G126300 Sobic003G126300 Sobic004G228800--Sobic003G126300 Sobic009G072700--Sobic010G064600 Sobic006G260500 Sobic006G260500 Sobic009G072700--Sobic006G260500 Sobic009G072700--Sobic005G177700 Sobic009G072700--Sobic008G093000 Sobic007G075500 Sobic007G075500 Sobic009G072700--Sobic007G075500 Sobic001G301700 Sobic001G301700 Sobic009G072700--Sobic001G301700 Sobic009G072700--Sobic010G261600 Sobic003G365300 Sobic003G365300 Sobic009G072700--Sobic003G365300 Sobic009G072700--Sobic004G228800 Sobic002G431000--Sobic010G184300 Sobic002G295700 Sobic002G295700 Sobic002G431000--Sobic002G295700 Sobic002G431000--Sobic003G377000 Sobic001G457700 Sobic001G457700 Sobic002G431000--Sobic001G457700 Sobic002G431000--Sobic004G236200 Sobic002G431000--Sobic005G177700 Sobic004G112900 Sobic004G112900 Sobic002G431000--Sobic004G112900 Sobic002G431000--Sobic007G056100 Sobic002G431000--Sobic010G064600
Octagon: transcription factors


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