Gene annotation
Transcriptome id Sobic.006G115300.1,Sobic.006G115300.2
Synonym AAP7, Sb06g019660
Functional annotation amino acid transporter, putative, expressed
UniProt A0A1B6PLI1 , A0A1Z5RDU3
Pfam PF01490
Panther DB PTHR22950 PTHR22950:SF228
NCBI CDD KOG1303; Amino acid transporters
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G09220 : amino acid permease 2
RAP-DB (Rice) LOC_Os04g39489.1 : amino acid transporter, putative, expressed
MaizeGDB (Corn) Zm00025a030927 , Zm00025a056273 , Zm00025a011043 , Zm00025a009452 , Zm00025a042315 , Zm00025a026558 , Zm00025a039511 , Zm00025a026584 , Zm00025a051049 , Zm00025a021860
Brachypodium KQJ85086 , PNT69503 , KQJ85085 , PNT61270 , PNT61269 , PNT61268 , KQK01547 , KQK01546 , KQK01545 , KQK10874 , KQK18008 , KQK18009
Barley HORVU7Hr1G088560.6 , HORVU7Hr1G088560.7 , HORVU7Hr1G088560.4 , HORVU7Hr1G088560.5 , HORVU7Hr1G088560.2 , HORVU7Hr1G088560.3 , HORVU7Hr1G088560.1 , HORVU7Hr1G088510.3 , HORVU7Hr1G088510.2 , HORVU7Hr1G088510.1 , HORVU7Hr1G088510.7 , HORVU7Hr1G088510.6 , HORVU7Hr1G088510.4 , HORVU7Hr1G088510.8 , HORVU2Hr1G081790.9 , HORVU2Hr1G081790.8 , HORVU2Hr1G081790.3 , HORVU2Hr1G081790.2 , HORVU2Hr1G081790.1 , HORVU2Hr1G081790.7 , HORVU2Hr1G081790.6 , HORVU2Hr1G081790.5 , HORVU2Hr1G081790.4
Wheat TraesCS2D02G331800 , TraesCS2D02G331800 , TraesCS3D02G402200 , TraesCS2A02G331100 , TraesCS2A02G331100 , TraesCS7A02G188200 , TraesCS3B02G441100 , TraesCS7D02G366000 , TraesCS7A02G356600 , TraesCS7B02G271151 , TraesCS6B02G314200 , TraesCS7B02G271200 , TraesCS3B02G441300 , TraesCS2B02G351100 , TraesCS2B02G351100 , TraesCS3A02G406900 , TraesCS7D02G366200 , TraesCS3A02G388000 , TraesCS7D02G189000 , TraesCS7B02G093200 , TraesCS7A02G356639
Populus -


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cDNA sequences
Sobic.006G115300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G118600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@eukaryotic peptide chain release factor subunit 1-1, putative, expressed K03265: ETF1, peptide chain release factor subunit 1
2 Sobic.007G131700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
3 Sobic.003G252400 drought induced 19 protein, putative, expressed -
4 Sobic.001G235500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
5 Sobic.003G252300 universal stress protein domain containing protein, putative, expressed -
6 Sobic.004G236550 - -
7 Sobic.003G272400 DUF292 domain containing protein, expressed -
8 Sobic.001G521500 callose synthase-like enzyme(PubMedID : 25311645)@1,3-beta-glucan synthase component domain containing protein, expressed K11000: callose synthase
9 Sobic.003G126300 OsRhmbd2 - Putative Rhomboid homologue, expressed -
10 Sobic.009G136100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@auxin-induced protein 5NG4, putative, expressed -
11 Sobic.003G397500 expressed protein -
12 Sobic.006G086100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@- K03006: RPB1, DNA-directed RNA polymerase II subunit RPB1
13 Sobic.009G097300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.23 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
14 Sobic.003G281900 regulator of chromosome condensation, putative, expressed -
15 Sobic.009G079300 receptor protein kinase-like, putative, expressed -
16 Sobic.003G269800 phosphatidylinositol transfer, putative, expressed -
17 Sobic.001G271500 expressed protein -
18 Sobic.006G258800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase
19 Sobic.008G190900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@thioesterase family protein, putative, expressed -
20 Sobic.008G179200 Na/Ca exchanger(PubMedID : 22196357)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@sodium/calcium exchanger protein, putative, expressed K13754: SLC24A6, solute carrier family 24 (sodium/potassium/calcium exchanger), member 6


Gene co-expression network
sample Sobic006G115300 Sobic006G115300 Sobic009G118600 Sobic009G118600 Sobic006G115300--Sobic009G118600 Sobic007G131700 Sobic007G131700 Sobic006G115300--Sobic007G131700 Sobic003G252400 Sobic003G252400 Sobic006G115300--Sobic003G252400 Sobic001G235500 Sobic001G235500 Sobic006G115300--Sobic001G235500 Sobic003G252300 Sobic003G252300 Sobic006G115300--Sobic003G252300 Sobic004G236550 Sobic004G236550 Sobic006G115300--Sobic004G236550 Sobic003G272400 Sobic003G272400 Sobic006G115300--Sobic003G272400 Sobic001G521500 Sobic001G521500 Sobic006G115300--Sobic001G521500 Sobic003G126300 Sobic003G126300 Sobic006G115300--Sobic003G126300 Sobic009G118600--Sobic001G235500 Sobic009G118600--Sobic006G115300 Sobic003G269800 Sobic003G269800 Sobic009G118600--Sobic003G269800 Sobic009G136100 Sobic009G136100 Sobic009G118600--Sobic009G136100 Sobic006G086100 Sobic006G086100 Sobic009G118600--Sobic006G086100 Sobic009G118600--Sobic004G236550 Sobic005G215766 Sobic005G215766 Sobic009G118600--Sobic005G215766 Sobic009G097300 Sobic009G097300 Sobic009G118600--Sobic009G097300 Sobic003G332000 Sobic003G332000 Sobic009G118600--Sobic003G332000 Sobic007G131700--Sobic003G252400 Sobic007G131700--Sobic006G115300 Sobic002G110200 Sobic002G110200 Sobic007G131700--Sobic002G110200 Sobic003G229000 Sobic003G229000 Sobic007G131700--Sobic003G229000 Sobic002G189000 Sobic002G189000 Sobic007G131700--Sobic002G189000 Sobic007G025800 Sobic007G025800 Sobic007G131700--Sobic007G025800 Sobic010G260300 Sobic010G260300 Sobic007G131700--Sobic010G260300 Sobic002G013900 Sobic002G013900 Sobic007G131700--Sobic002G013900 Sobic002G331450 Sobic002G331450 Sobic007G131700--Sobic002G331450 Sobic003G252400--Sobic002G331450 Sobic004G211301 Sobic004G211301 Sobic003G252400--Sobic004G211301 Sobic003G397500 Sobic003G397500 Sobic003G252400--Sobic003G397500 Sobic003G252400--Sobic002G110200 Sobic010G085400 Sobic010G085400 Sobic003G252400--Sobic010G085400 Sobic005G060600 Sobic005G060600 Sobic003G252400--Sobic005G060600 Sobic003G252400--Sobic002G013900 Sobic002G325600 Sobic002G325600 Sobic003G252400--Sobic002G325600 Sobic003G252400--Sobic007G131700 Sobic001G235500--Sobic009G136100 Sobic001G235500--Sobic009G118600 Sobic001G235500--Sobic005G215766 Sobic001G235500--Sobic006G115300 Sobic004G200800 Sobic004G200800 Sobic001G235500--Sobic004G200800 Sobic009G236300 Sobic009G236300 Sobic001G235500--Sobic009G236300 Sobic006G146100 Sobic006G146100 Sobic001G235500--Sobic006G146100 Sobic001G235500--Sobic006G086100 Sobic001G235500--Sobic009G097300 Sobic002G274800 Sobic002G274800 Sobic003G252300--Sobic002G274800 Sobic005G216000 Sobic005G216000 Sobic003G252300--Sobic005G216000 Sobic003G105800 Sobic003G105800 Sobic003G252300--Sobic003G105800 Sobic003G252300--Sobic006G115300 Sobic008G190900 Sobic008G190900 Sobic003G252300--Sobic008G190900 Sobic004G162400 Sobic004G162400 Sobic003G252300--Sobic004G162400 Sobic008G189200 Sobic008G189200 Sobic003G252300--Sobic008G189200 Sobic007G225900 Sobic007G225900 Sobic003G252300--Sobic007G225900 Sobic001G092000 Sobic001G092000 Sobic003G252300--Sobic001G092000 Sobic009G079300 Sobic009G079300 Sobic004G236550--Sobic009G079300 Sobic002G355200 Sobic002G355200 Sobic004G236550--Sobic002G355200 Sobic004G236550--Sobic009G136100 Sobic004G236550--Sobic003G332000 Sobic004G236550--Sobic006G086100 Sobic005G016800 Sobic005G016800 Sobic004G236550--Sobic005G016800 Sobic004G236550--Sobic009G118600 Sobic004G236550--Sobic006G115300 Sobic002G225300 Sobic002G225300 Sobic004G236550--Sobic002G225300 Sobic004G353600 Sobic004G353600 Sobic003G272400--Sobic004G353600 Sobic003G281900 Sobic003G281900 Sobic003G272400--Sobic003G281900 Sobic003G272400--Sobic003G252400 Sobic002G306000 Sobic002G306000 Sobic003G272400--Sobic002G306000 Sobic003G272400--Sobic010G260300 Sobic003G272400--Sobic003G126300 Sobic006G207900 Sobic006G207900 Sobic003G272400--Sobic006G207900 Sobic001G110900 Sobic001G110900 Sobic003G272400--Sobic001G110900 Sobic004G309600 Sobic004G309600 Sobic003G272400--Sobic004G309600 Sobic009G122325 Sobic009G122325 Sobic001G521500--Sobic009G122325 Sobic001G521500--Sobic003G252400 Sobic003G036600 Sobic003G036600 Sobic001G521500--Sobic003G036600 Sobic005G087900 Sobic005G087900 Sobic001G521500--Sobic005G087900 Sobic001G521500--Sobic003G397500 Sobic001G521500--Sobic003G229000 Sobic001G521500--Sobic006G115300 Sobic001G521500--Sobic009G136100 Sobic002G229600 Sobic002G229600 Sobic001G521500--Sobic002G229600 Sobic004G228800 Sobic004G228800 Sobic003G126300--Sobic004G228800 Sobic003G126300--Sobic009G079300 Sobic004G004200 Sobic004G004200 Sobic003G126300--Sobic004G004200 Sobic008G110600 Sobic008G110600 Sobic003G126300--Sobic008G110600 Sobic004G261600 Sobic004G261600 Sobic003G126300--Sobic004G261600 Sobic006G034000 Sobic006G034000 Sobic003G126300--Sobic006G034000 Sobic003G126300--Sobic003G272400 Sobic007G056600 Sobic007G056600 Sobic003G126300--Sobic007G056600 Sobic006G033200 Sobic006G033200 Sobic003G126300--Sobic006G033200
Octagon: transcription factors


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