Gene annotation
Transcriptome id Sobic.007G216500.1
Synonym Sb07g028290
Functional annotation expressed protein
UniProt C5YJ77
Pfam -
Panther DB PTHR13052 PTHR13052:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G02290 : -
RAP-DB (Rice) LOC_Os08g39120.1 : expressed protein
MaizeGDB (Corn) Zm00025a033766
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.007G216500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G179600 expressed protein -
2 Sobic.002G395600 bZIP transcription factor domain containing protein, expressed -
3 Sobic.008G058700 metal cation transporter, putative, expressed -
4 Sobic.010G030900 glycosyltransferase, putative, expressed -
5 Sobic.003G342600 DUF640 domain containing protein, putative, expressed -
6 Sobic.010G101400 glycosyl transferase 8 domain containing protein, putative, expressed -
7 Sobic.002G270700 OsRhmbd16 - Putative Rhomboid homologue, expressed -
8 Sobic.001G311100 ubiquitin family protein, putative, expressed K04523: UBQLN, ubiquilin
9 Sobic.009G184400 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
10 Sobic.010G071700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
11 Sobic.003G129400 glycosyltransferase family 43 protein, putative, expressed K00735: galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1
12 Sobic.004G059900 bZIP transcription factor domain containing protein, expressed -
13 Sobic.003G409800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@No apical meristem protein, putative, expressed -
14 Sobic.003G410400 zinc finger, C3HC4 type domain containing protein, expressed -
15 Sobic.002G185300 transporter, putative, expressed -
16 Sobic.002G113500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@RALFL4 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
17 Sobic.006G263100 expressed protein -
18 Sobic.002G276400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tyrosine protein kinase domain containing protein, putative, expressed -
19 Sobic.007G180300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
20 Sobic.004G257300 GPI-anchored protein, putative, expressed -


Gene co-expression network
sample Sobic007G216500 Sobic007G216500 Sobic009G179600 Sobic009G179600 Sobic007G216500--Sobic009G179600 Sobic002G395600 Sobic002G395600 Sobic007G216500--Sobic002G395600 Sobic008G058700 Sobic008G058700 Sobic007G216500--Sobic008G058700 Sobic010G030900 Sobic010G030900 Sobic007G216500--Sobic010G030900 Sobic003G342600 Sobic003G342600 Sobic007G216500--Sobic003G342600 Sobic010G101400 Sobic010G101400 Sobic007G216500--Sobic010G101400 Sobic002G270700 Sobic002G270700 Sobic007G216500--Sobic002G270700 Sobic001G311100 Sobic001G311100 Sobic007G216500--Sobic001G311100 Sobic009G184400 Sobic009G184400 Sobic007G216500--Sobic009G184400 Sobic009G179600--Sobic007G216500 Sobic006G263100 Sobic006G263100 Sobic009G179600--Sobic006G263100 Sobic003G033000 Sobic003G033000 Sobic009G179600--Sobic003G033000 Sobic004G039300 Sobic004G039300 Sobic009G179600--Sobic004G039300 Sobic006G217300 Sobic006G217300 Sobic009G179600--Sobic006G217300 Sobic001G122500 Sobic001G122500 Sobic009G179600--Sobic001G122500 Sobic004G353600 Sobic004G353600 Sobic009G179600--Sobic004G353600 Sobic004G031600 Sobic004G031600 Sobic009G179600--Sobic004G031600 Sobic009G179600--Sobic002G395600 Sobic002G395600--Sobic006G263100 Sobic003G392200 Sobic003G392200 Sobic002G395600--Sobic003G392200 Sobic001G214200 Sobic001G214200 Sobic002G395600--Sobic001G214200 Sobic002G330300 Sobic002G330300 Sobic002G395600--Sobic002G330300 Sobic007G178200 Sobic007G178200 Sobic002G395600--Sobic007G178200 Sobic010G017000 Sobic010G017000 Sobic002G395600--Sobic010G017000 Sobic004G026200 Sobic004G026200 Sobic002G395600--Sobic004G026200 Sobic004G280800 Sobic004G280800 Sobic002G395600--Sobic004G280800 Sobic001G283500 Sobic001G283500 Sobic002G395600--Sobic001G283500 Sobic003G410400 Sobic003G410400 Sobic008G058700--Sobic003G410400 Sobic004G083000 Sobic004G083000 Sobic008G058700--Sobic004G083000 Sobic003G126800 Sobic003G126800 Sobic008G058700--Sobic003G126800 Sobic003G252900 Sobic003G252900 Sobic008G058700--Sobic003G252900 Sobic009G070200 Sobic009G070200 Sobic008G058700--Sobic009G070200 Sobic003G043400 Sobic003G043400 Sobic008G058700--Sobic003G043400 Sobic002G044000 Sobic002G044000 Sobic008G058700--Sobic002G044000 Sobic003G358300 Sobic003G358300 Sobic008G058700--Sobic003G358300 Sobic009G160200 Sobic009G160200 Sobic008G058700--Sobic009G160200 Sobic004G257300 Sobic004G257300 Sobic010G030900--Sobic004G257300 Sobic002G248100 Sobic002G248100 Sobic010G030900--Sobic002G248100 Sobic001G476400 Sobic001G476400 Sobic010G030900--Sobic001G476400 Sobic003G150400 Sobic003G150400 Sobic010G030900--Sobic003G150400 Sobic010G030900--Sobic009G184400 Sobic003G296700 Sobic003G296700 Sobic010G030900--Sobic003G296700 Sobic001G051600 Sobic001G051600 Sobic010G030900--Sobic001G051600 Sobic001G173300 Sobic001G173300 Sobic010G030900--Sobic001G173300 Sobic007G180300 Sobic007G180300 Sobic010G030900--Sobic007G180300 Sobic009G170100 Sobic009G170100 Sobic003G342600--Sobic009G170100 Sobic010G071700 Sobic010G071700 Sobic003G342600--Sobic010G071700 Sobic006G032200 Sobic006G032200 Sobic003G342600--Sobic006G032200 Sobic001G063600 Sobic001G063600 Sobic003G342600--Sobic001G063600 Sobic003G129400 Sobic003G129400 Sobic003G342600--Sobic003G129400 Sobic009G159900 Sobic009G159900 Sobic003G342600--Sobic009G159900 Sobic009G030200 Sobic009G030200 Sobic003G342600--Sobic009G030200 Sobic003G144200 Sobic003G144200 Sobic003G342600--Sobic003G144200 Sobic001G050800 Sobic001G050800 Sobic003G342600--Sobic001G050800 Sobic010G008600 Sobic010G008600 Sobic010G101400--Sobic010G008600 Sobic008G119400 Sobic008G119400 Sobic010G101400--Sobic008G119400 Sobic010G101400--Sobic007G216500 Sobic010G101400--Sobic010G030900 Sobic003G127100 Sobic003G127100 Sobic010G101400--Sobic003G127100 Sobic002G113500 Sobic002G113500 Sobic010G101400--Sobic002G113500 Sobic009G194200 Sobic009G194200 Sobic010G101400--Sobic009G194200 Sobic010G101400--Sobic004G257300 Sobic001G321800 Sobic001G321800 Sobic010G101400--Sobic001G321800 Sobic004G273200 Sobic004G273200 Sobic002G270700--Sobic004G273200 Sobic002G270700--Sobic003G392200 Sobic001G525400 Sobic001G525400 Sobic002G270700--Sobic001G525400 Sobic003G338900 Sobic003G338900 Sobic002G270700--Sobic003G338900 Sobic006G267700 Sobic006G267700 Sobic002G270700--Sobic006G267700 Sobic002G270700--Sobic002G330300 Sobic002G270700--Sobic007G178200 Sobic002G270700--Sobic006G263100 Sobic002G197600 Sobic002G197600 Sobic002G270700--Sobic002G197600 Sobic002G261900 Sobic002G261900 Sobic001G311100--Sobic002G261900 Sobic010G094600 Sobic010G094600 Sobic001G311100--Sobic010G094600 Sobic001G311100--Sobic009G160200 Sobic001G311100--Sobic003G043400 Sobic010G026700 Sobic010G026700 Sobic001G311100--Sobic010G026700 Sobic001G311100--Sobic001G283500 Sobic010G188100 Sobic010G188100 Sobic001G311100--Sobic010G188100 Sobic001G311100--Sobic010G017000 Sobic002G083266 Sobic002G083266 Sobic001G311100--Sobic002G083266 Sobic001G209800 Sobic001G209800 Sobic009G184400--Sobic001G209800 Sobic001G441100 Sobic001G441100 Sobic009G184400--Sobic001G441100 Sobic009G217600 Sobic009G217600 Sobic009G184400--Sobic009G217600 Sobic001G035000 Sobic001G035000 Sobic009G184400--Sobic001G035000 Sobic009G184400--Sobic002G248100 Sobic001G398500 Sobic001G398500 Sobic009G184400--Sobic001G398500 Sobic002G294700 Sobic002G294700 Sobic009G184400--Sobic002G294700 Sobic001G077400 Sobic001G077400 Sobic009G184400--Sobic001G077400 Sobic009G184400--Sobic001G476400
Octagon: transcription factors


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