Gene annotation
Transcriptome id Sobic.002G185300.3,Sobic.002G185300.2
Synonym Sb02g023340, UNE2
Functional annotation transporter, putative, expressed
UniProt A0A1W0W4T3 , A0A1W0W4U6
Pfam PF07690 PF00083
Panther DB PTHR23505 PTHR23505:SF14
NCBI CDD KOG1330; Sugar transporter/spinster transmembrane protein
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0016021integral component of membrane


Orthologs (automatic annotation)
TAIR AT5G10190 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os08g31670.1 : transporter, putative, expressed
MaizeGDB (Corn) Zm00025a046726 , Zm00025a046728 , Zm00025a006070
Brachypodium KQJ90042 , PNT64471 , PNT64470 , KQJ90038 , KQJ90039
Barley HORVU5Hr1G058070.4 , HORVU5Hr1G058070.3 , HORVU5Hr1G058070.2 , HORVU5Hr1G058070.1 , HORVU5Hr1G058020.4 , HORVU5Hr1G058020.5 , HORVU5Hr1G058020.6 , HORVU5Hr1G058020.7 , HORVU5Hr1G058020.1 , HORVU5Hr1G058020.2 , HORVU5Hr1G058020.3 , HORVU5Hr1G058060.1 , HORVU5Hr1G058060.2 , HORVU5Hr1G058060.3 , HORVU5Hr1G058060.4
Wheat TraesCS5A02G189400 , TraesCS5B02G193800 , TraesCS5D02G201600 , TraesCS5B02G193700 , TraesCS5A02G189500 , TraesCS5D02G201500 , TraesCS4A02G063000 , TraesCS5B02G194100 , TraesCS5D02G201400
Populus -


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cDNA sequences
Sobic.002G185300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G129400 glycosyltransferase family 43 protein, putative, expressed K00735: galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1
2 Sobic.004G155200 expressed protein -
3 Sobic.001G112000 3,4-dihydroxy-2-butanone kinase, putative, expressed K00863: DAK, triose/dihydroxyacetone kinase / FAD-AMP lyase (cyclizing)
4 Sobic.004G353600 sucrose transporters(PubMedID : 23805151)@Sucrose transporter genes(PubMedID : 24456189)@Sugar transporter(PubMedID : 27330561)@transporter, major facilitator family, putative, expressed K15378: solute carrier family 45, member 1/2/4
5 Sobic.009G201500 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@HSP101 Heat shock protein 101("PubMedID : 26759170,PubMedID : 24597475")@heat shock protein 101, putative, expressed K03695: ATP-dependent Clp protease ATP-binding subunit ClpB
6 Sobic.007G216500 expressed protein -
7 Sobic.002G225300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@CPuORF39 - conserved peptide uORF-containing transcript, expressed K09419: heat shock transcription factor, other eukaryote
8 Sobic.003G033700 expressed protein K15326: tRNA-splicing endonuclease subunit Sen54
9 Sobic.001G510400 cytochrome P450 86A1, putative, expressed -
10 Sobic.001G155300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed K09840: 9-cis-epoxycarotenoid dioxygenase
11 Sobic.005G061000 ABC-2 type transporter domain containing protein, expressed -
12 Sobic.010G071700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
13 Sobic.003G342600 DUF640 domain containing protein, putative, expressed -
14 Sobic.005G110421 - -
15 Sobic.001G005700 acyl carrier protein, putative, expressed -
16 Sobic.003G197300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@AR791, putative, expressed -
17 Sobic.002G342100 no apical meristem protein, putative, expressed -
18 Sobic.003G225900 expressed protein -
19 Sobic.003G227600 CPuORF29 - conserved peptide uORF-containing transcript, expressed -
20 Sobic.009G156600 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, flower, stem and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@transmembrane amino acid transporter protein, putative, expressed K13946: AUX1, auxin influx carrier (AUX1 LAX family)


Gene co-expression network
sample Sobic002G185300 Sobic002G185300 Sobic003G129400 Sobic003G129400 Sobic002G185300--Sobic003G129400 Sobic004G155200 Sobic004G155200 Sobic002G185300--Sobic004G155200 Sobic001G112000 Sobic001G112000 Sobic002G185300--Sobic001G112000 Sobic004G353600 Sobic004G353600 Sobic002G185300--Sobic004G353600 Sobic009G201500 Sobic009G201500 Sobic002G185300--Sobic009G201500 Sobic007G216500 Sobic007G216500 Sobic002G185300--Sobic007G216500 Sobic002G225300 Sobic002G225300 Sobic002G185300--Sobic002G225300 Sobic003G033700 Sobic003G033700 Sobic002G185300--Sobic003G033700 Sobic001G510400 Sobic001G510400 Sobic002G185300--Sobic001G510400 Sobic003G342600 Sobic003G342600 Sobic003G129400--Sobic003G342600 Sobic010G071700 Sobic010G071700 Sobic003G129400--Sobic010G071700 Sobic001G063600 Sobic001G063600 Sobic003G129400--Sobic001G063600 Sobic001G379000 Sobic001G379000 Sobic003G129400--Sobic001G379000 Sobic007G180300 Sobic007G180300 Sobic003G129400--Sobic007G180300 Sobic009G030200 Sobic009G030200 Sobic003G129400--Sobic009G030200 Sobic005G231700 Sobic005G231700 Sobic003G129400--Sobic005G231700 Sobic003G129400--Sobic002G185300 Sobic001G403600 Sobic001G403600 Sobic003G129400--Sobic001G403600 Sobic001G502700 Sobic001G502700 Sobic004G155200--Sobic001G502700 Sobic001G286000 Sobic001G286000 Sobic004G155200--Sobic001G286000 Sobic004G155200--Sobic002G225300 Sobic004G155200--Sobic002G185300 Sobic008G092400 Sobic008G092400 Sobic004G155200--Sobic008G092400 Sobic001G037150 Sobic001G037150 Sobic004G155200--Sobic001G037150 Sobic004G155150 Sobic004G155150 Sobic004G155200--Sobic004G155150 Sobic001G005700 Sobic001G005700 Sobic004G155200--Sobic001G005700 Sobic006G267900 Sobic006G267900 Sobic004G155200--Sobic006G267900 Sobic002G342100 Sobic002G342100 Sobic001G112000--Sobic002G342100 Sobic009G128300 Sobic009G128300 Sobic001G112000--Sobic009G128300 Sobic008G031300 Sobic008G031300 Sobic001G112000--Sobic008G031300 Sobic003G227600 Sobic003G227600 Sobic001G112000--Sobic003G227600 Sobic004G211301 Sobic004G211301 Sobic001G112000--Sobic004G211301 Sobic001G509400 Sobic001G509400 Sobic001G112000--Sobic001G509400 Sobic002G331450 Sobic002G331450 Sobic001G112000--Sobic002G331450 Sobic002G182800 Sobic002G182800 Sobic001G112000--Sobic002G182800 Sobic005G096700 Sobic005G096700 Sobic001G112000--Sobic005G096700 Sobic003G272400 Sobic003G272400 Sobic004G353600--Sobic003G272400 Sobic002G306000 Sobic002G306000 Sobic004G353600--Sobic002G306000 Sobic006G078300 Sobic006G078300 Sobic004G353600--Sobic006G078300 Sobic003G087100 Sobic003G087100 Sobic004G353600--Sobic003G087100 Sobic003G378000 Sobic003G378000 Sobic004G353600--Sobic003G378000 Sobic001G157400 Sobic001G157400 Sobic004G353600--Sobic001G157400 Sobic003G332000 Sobic003G332000 Sobic004G353600--Sobic003G332000 Sobic001G075800 Sobic001G075800 Sobic004G353600--Sobic001G075800 Sobic006G203000 Sobic006G203000 Sobic004G353600--Sobic006G203000 Sobic006G005600 Sobic006G005600 Sobic009G201500--Sobic006G005600 Sobic001G092600 Sobic001G092600 Sobic009G201500--Sobic001G092600 Sobic006G055600 Sobic006G055600 Sobic009G201500--Sobic006G055600 Sobic004G283201 Sobic004G283201 Sobic009G201500--Sobic004G283201 Sobic009G201500--Sobic001G286000 Sobic003G373150 Sobic003G373150 Sobic009G201500--Sobic003G373150 Sobic004G321000 Sobic004G321000 Sobic009G201500--Sobic004G321000 Sobic003G233900 Sobic003G233900 Sobic009G201500--Sobic003G233900 Sobic004G283300 Sobic004G283300 Sobic009G201500--Sobic004G283300 Sobic009G179600 Sobic009G179600 Sobic007G216500--Sobic009G179600 Sobic002G395600 Sobic002G395600 Sobic007G216500--Sobic002G395600 Sobic008G058700 Sobic008G058700 Sobic007G216500--Sobic008G058700 Sobic010G030900 Sobic010G030900 Sobic007G216500--Sobic010G030900 Sobic007G216500--Sobic003G342600 Sobic010G101400 Sobic010G101400 Sobic007G216500--Sobic010G101400 Sobic002G270700 Sobic002G270700 Sobic007G216500--Sobic002G270700 Sobic001G311100 Sobic001G311100 Sobic007G216500--Sobic001G311100 Sobic009G184400 Sobic009G184400 Sobic007G216500--Sobic009G184400 Sobic004G236550 Sobic004G236550 Sobic002G225300--Sobic004G236550 Sobic002G225300--Sobic004G155200 Sobic002G225300--Sobic001G005700 Sobic003G289900 Sobic003G289900 Sobic002G225300--Sobic003G289900 Sobic007G025800 Sobic007G025800 Sobic002G225300--Sobic007G025800 Sobic007G131700 Sobic007G131700 Sobic002G225300--Sobic007G131700 Sobic002G225300--Sobic001G037150 Sobic003G225900 Sobic003G225900 Sobic002G225300--Sobic003G225900 Sobic002G225300--Sobic003G332000 Sobic003G033700--Sobic004G353600 Sobic003G033700--Sobic010G071700 Sobic003G033700--Sobic007G216500 Sobic003G033700--Sobic002G185300 Sobic009G108700 Sobic009G108700 Sobic003G033700--Sobic009G108700 Sobic003G033700--Sobic008G058700 Sobic001G471000 Sobic001G471000 Sobic003G033700--Sobic001G471000 Sobic007G178200 Sobic007G178200 Sobic003G033700--Sobic007G178200 Sobic009G161900 Sobic009G161900 Sobic003G033700--Sobic009G161900 Sobic005G110421 Sobic005G110421 Sobic001G510400--Sobic005G110421 Sobic003G197300 Sobic003G197300 Sobic001G510400--Sobic003G197300 Sobic001G510400--Sobic002G185300 Sobic001G510400--Sobic002G342100 Sobic001G510400--Sobic001G112000 Sobic003G304100 Sobic003G304100 Sobic001G510400--Sobic003G304100 Sobic003G409800 Sobic003G409800 Sobic001G510400--Sobic003G409800 Sobic003G358200 Sobic003G358200 Sobic001G510400--Sobic003G358200 Sobic001G510400--Sobic002G225300
Octagon: transcription factors


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