Gene annotation
| Transcriptome id | Sobic.005G061000.1 |
|---|---|
| Synonym | ATABCG25, ABCG25, Sb05g004940 |
| Functional annotation | ABC-2 type transporter domain containing protein, expressed |
| UniProt | A0A1B6PQF9 |
| Pfam | PF00005 PF01061 |
| Panther DB | PTHR19241 PTHR19241:SF225 |
| NCBI CDD | KOG0061; Transporter, ABC superfamily (Breast cancer resistance protein) |
| KEGG Orthology | - |
| Gene Ontology | GO:0016887; ATPase activity GO:0005524ATP binding GO:0016020membrane |
Orthologs (automatic annotation)
| TAIR | AT1G71960 : ATP-binding casette family G25 |
|---|---|
| RAP-DB (Rice) | LOC_Os11g07600.1 : ABC-2 type transporter domain containing protein, expressed |
| MaizeGDB (Corn) | Zm00025a034012 , Zm00025a012807 , Zm00025a026953 , Zm00025a028734 |
| Brachypodium | KQJ89195 |
| Barley | HORVU7Hr1G090350.4 , HORVU7Hr1G090350.5 , HORVU7Hr1G090350.6 , HORVU7Hr1G090350.7 , HORVU7Hr1G090350.2 , HORVU7Hr1G090350.3 , HORVU4Hr1G018800.9 , HORVU4Hr1G018800.8 , HORVU4Hr1G018800.7 , HORVU4Hr1G018800.6 , HORVU4Hr1G018800.5 , HORVU4Hr1G018800.4 , HORVU4Hr1G018800.3 , HORVU4Hr1G018800.2 , HORVU4Hr1G018800.1 , HORVU4Hr1G018800.10 |
| Wheat | TraesCS4B02G095200 , TraesCS4A02G216900 , TraesCS4D02G092000 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.005G061033 | - | - |
| 2 | Sobic.002G037400 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed | K09840: 9-cis-epoxycarotenoid dioxygenase |
| 3 | Sobic.007G143100 | SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@- | - |
| 4 | Sobic.001G155300 | SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed | K09840: 9-cis-epoxycarotenoid dioxygenase |
| 5 | Sobic.005G016900 | CRP11 - Cysteine-rich family protein precursor, expressed | - |
| 6 | Sobic.003G397400 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein | - |
| 7 | Sobic.007G169600 | L1P family of ribosomal proteins domain containing protein, expressed | K02865: RP-L10Ae, large subunit ribosomal protein L10Ae |
| 8 | Sobic.007G143200 | Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@- | - |
| 9 | Sobic.002G325600 | ankyrin repeat family protein, putative, expressed | - |
| 10 | Sobic.002G342100 | no apical meristem protein, putative, expressed | - |
| 11 | Sobic.009G076700 | expressed protein | - |
| 12 | Sobic.003G064300 | - | - |
| 13 | Sobic.002G331450 | - | - |
| 14 | Sobic.003G083000 | glycosyl hydrolase family 10 protein, putative, expressed | - |
| 15 | Sobic.007G073750 | - | - |
| 16 | Sobic.006G203000 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@immutans protein, putative, expressed | K17893: AOX1, ubiquinol oxidase |
| 17 | Sobic.001G075101 | - | - |
| 18 | Sobic.003G227600 | CPuORF29 - conserved peptide uORF-containing transcript, expressed | - |
| 19 | Sobic.006G194600 | FERONIA receptor-like kinase, putative, expressed | - |
| 20 | Sobic.008G040900 | amino acid permease family protein, putative, expressed | K03294: basic amino acid/polyamine antiporter, APA family |
Gene co-expression network
Octagon: transcription factors
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