Gene annotation
Transcriptome id Sobic.005G110421.1
Synonym -
Functional annotation -
UniProt A0A1Z5RHY0
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G281600 lachrymatory factor synthase, putative, expressed -
2 Sobic.006G223800 ZOS8-01 - C2H2 zinc finger protein, expressed -
3 Sobic.003G197300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@AR791, putative, expressed -
4 Sobic.001G510400 cytochrome P450 86A1, putative, expressed -
5 Sobic.003G358200 reticulon domain containing protein, putative, expressed -
6 Sobic.001G112000 3,4-dihydroxy-2-butanone kinase, putative, expressed K00863: DAK, triose/dihydroxyacetone kinase / FAD-AMP lyase (cyclizing)
7 Sobic.008G010900 DNA repair protein Rad51, putative, expressed K10872: meiotic recombination protein DMC1
8 Sobic.002G185300 transporter, putative, expressed -
9 Sobic.010G093400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Starch synthesis(PubMedID : 31624872)@Starch Synthase IIa(PubMedID : 21853065)@soluble starch synthase 2-3, chloroplast precursor, putative, expressed K00703: starch synthase
10 Sobic.006G107400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
11 Sobic.008G155600 ankyrin-1, putative, expressed -
12 Sobic.002G342100 no apical meristem protein, putative, expressed -
13 Sobic.010G114300 expressed protein -
14 Sobic.001G310700 protein kinase family protein, putative, expressed K14500: BR-signaling kinase
15 Sobic.005G061000 ABC-2 type transporter domain containing protein, expressed -
16 Sobic.001G155300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed K09840: 9-cis-epoxycarotenoid dioxygenase
17 Sobic.001G294600 RNA recognition motif containing protein, putative, expressed K14396: PABPN1, polyadenylate-binding protein 2
18 Sobic.002G014200 OsFBX209 - F-box domain containing protein, expressed -
19 Sobic.001G418400 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@cadmium tolerance factor, putative, expressed -
20 Sobic.003G342600 DUF640 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic005G110421 Sobic005G110421 Sobic003G281600 Sobic003G281600 Sobic005G110421--Sobic003G281600 Sobic006G223800 Sobic006G223800 Sobic005G110421--Sobic006G223800 Sobic003G197300 Sobic003G197300 Sobic005G110421--Sobic003G197300 Sobic001G510400 Sobic001G510400 Sobic005G110421--Sobic001G510400 Sobic003G358200 Sobic003G358200 Sobic005G110421--Sobic003G358200 Sobic001G112000 Sobic001G112000 Sobic005G110421--Sobic001G112000 Sobic008G010900 Sobic008G010900 Sobic005G110421--Sobic008G010900 Sobic002G185300 Sobic002G185300 Sobic005G110421--Sobic002G185300 Sobic010G093400 Sobic010G093400 Sobic005G110421--Sobic010G093400 Sobic003G281600--Sobic005G110421 Sobic006G119600 Sobic006G119600 Sobic003G281600--Sobic006G119600 Sobic010G114300 Sobic010G114300 Sobic003G281600--Sobic010G114300 Sobic005G061000 Sobic005G061000 Sobic003G281600--Sobic005G061000 Sobic006G081200 Sobic006G081200 Sobic003G281600--Sobic006G081200 Sobic003G281600--Sobic003G197300 Sobic003G224200 Sobic003G224200 Sobic003G281600--Sobic003G224200 Sobic001G418600 Sobic001G418600 Sobic003G281600--Sobic001G418600 Sobic010G253500 Sobic010G253500 Sobic003G281600--Sobic010G253500 Sobic006G223800--Sobic008G010900 Sobic006G017600 Sobic006G017600 Sobic006G223800--Sobic006G017600 Sobic002G014200 Sobic002G014200 Sobic006G223800--Sobic002G014200 Sobic006G223800--Sobic005G110421 Sobic002G019500 Sobic002G019500 Sobic006G223800--Sobic002G019500 Sobic002G019750 Sobic002G019750 Sobic006G223800--Sobic002G019750 Sobic008G155600 Sobic008G155600 Sobic006G223800--Sobic008G155600 Sobic006G223800--Sobic010G093400 Sobic006G223800--Sobic001G112000 Sobic003G197300--Sobic005G110421 Sobic001G206300 Sobic001G206300 Sobic003G197300--Sobic001G206300 Sobic002G225300 Sobic002G225300 Sobic003G197300--Sobic002G225300 Sobic003G197300--Sobic001G510400 Sobic005G061033 Sobic005G061033 Sobic003G197300--Sobic005G061033 Sobic003G197300--Sobic002G185300 Sobic003G289900 Sobic003G289900 Sobic003G197300--Sobic003G289900 Sobic003G197300--Sobic005G061000 Sobic003G197300--Sobic003G281600 Sobic001G510400--Sobic005G110421 Sobic001G510400--Sobic003G197300 Sobic001G510400--Sobic002G185300 Sobic002G342100 Sobic002G342100 Sobic001G510400--Sobic002G342100 Sobic001G510400--Sobic001G112000 Sobic003G304100 Sobic003G304100 Sobic001G510400--Sobic003G304100 Sobic003G409800 Sobic003G409800 Sobic001G510400--Sobic003G409800 Sobic001G510400--Sobic003G358200 Sobic001G510400--Sobic002G225300 Sobic003G358200--Sobic010G093400 Sobic002G420800 Sobic002G420800 Sobic003G358200--Sobic002G420800 Sobic007G152500 Sobic007G152500 Sobic003G358200--Sobic007G152500 Sobic006G164000 Sobic006G164000 Sobic003G358200--Sobic006G164000 Sobic001G067000 Sobic001G067000 Sobic003G358200--Sobic001G067000 Sobic001G379000 Sobic001G379000 Sobic003G358200--Sobic001G379000 Sobic001G294600 Sobic001G294600 Sobic003G358200--Sobic001G294600 Sobic001G419700 Sobic001G419700 Sobic003G358200--Sobic001G419700 Sobic010G207400 Sobic010G207400 Sobic003G358200--Sobic010G207400 Sobic001G112000--Sobic002G342100 Sobic009G128300 Sobic009G128300 Sobic001G112000--Sobic009G128300 Sobic008G031300 Sobic008G031300 Sobic001G112000--Sobic008G031300 Sobic003G227600 Sobic003G227600 Sobic001G112000--Sobic003G227600 Sobic004G211301 Sobic004G211301 Sobic001G112000--Sobic004G211301 Sobic001G509400 Sobic001G509400 Sobic001G112000--Sobic001G509400 Sobic002G331450 Sobic002G331450 Sobic001G112000--Sobic002G331450 Sobic002G182800 Sobic002G182800 Sobic001G112000--Sobic002G182800 Sobic005G096700 Sobic005G096700 Sobic001G112000--Sobic005G096700 Sobic008G010900--Sobic006G223800 Sobic008G010900--Sobic006G017600 Sobic008G010900--Sobic001G112000 Sobic006G199700 Sobic006G199700 Sobic008G010900--Sobic006G199700 Sobic004G101500 Sobic004G101500 Sobic008G010900--Sobic004G101500 Sobic008G010900--Sobic002G342100 Sobic008G010900--Sobic003G409800 Sobic008G010900--Sobic005G110421 Sobic010G090700 Sobic010G090700 Sobic008G010900--Sobic010G090700 Sobic003G129400 Sobic003G129400 Sobic002G185300--Sobic003G129400 Sobic004G155200 Sobic004G155200 Sobic002G185300--Sobic004G155200 Sobic002G185300--Sobic001G112000 Sobic004G353600 Sobic004G353600 Sobic002G185300--Sobic004G353600 Sobic009G201500 Sobic009G201500 Sobic002G185300--Sobic009G201500 Sobic007G216500 Sobic007G216500 Sobic002G185300--Sobic007G216500 Sobic002G185300--Sobic002G225300 Sobic003G033700 Sobic003G033700 Sobic002G185300--Sobic003G033700 Sobic002G185300--Sobic001G510400 Sobic010G093400--Sobic007G152500 Sobic007G204600 Sobic007G204600 Sobic010G093400--Sobic007G204600 Sobic010G273800 Sobic010G273800 Sobic010G093400--Sobic010G273800 Sobic010G093400--Sobic003G358200 Sobic003G230500 Sobic003G230500 Sobic010G093400--Sobic003G230500 Sobic010G093400--Sobic002G420800 Sobic002G100000 Sobic002G100000 Sobic010G093400--Sobic002G100000 Sobic004G212350 Sobic004G212350 Sobic010G093400--Sobic004G212350 Sobic005G171800 Sobic005G171800 Sobic010G093400--Sobic005G171800
Octagon: transcription factors


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