Gene annotation
Transcriptome id Sobic.001G418400.2
Synonym Sb01g039370
Functional annotation expressed high in CK60 (an inefficient nitrogen user) (PubMedID : 28697783)
cadmium tolerance factor, putative, expressed
UniProt A0A1Z5SA63
Pfam PF13962
Panther DB PTHR24177 PTHR24177:SF51
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G11000 : Ankyrin repeat family protein
RAP-DB (Rice) LOC_Os06g19110.1 : cadmium tolerance factor, putative, expressed
MaizeGDB (Corn) Zm00025a039649 , Zm00025a001870
Brachypodium PNT66715 , KQJ95251 , KQJ95252
Barley HORVU6Hr1G086570.2 , HORVU6Hr1G086570.3 , HORVU6Hr1G086570.1 , HORVU6Hr1G086570.6 , HORVU6Hr1G086570.4 , HORVU6Hr1G086570.5 , HORVU6Hr1G086440.14 , HORVU6Hr1G086440.15 , HORVU6Hr1G086440.16 , HORVU6Hr1G086440.17 , HORVU6Hr1G086440.10 , HORVU6Hr1G086440.11 , HORVU6Hr1G086440.12 , HORVU6Hr1G086440.13 , HORVU7Hr1G044100.1 , HORVU7Hr1G044100.2 , HORVU7Hr1G044100.3 , HORVU7Hr1G044100.4 , HORVU7Hr1G044100.5 , HORVU7Hr1G044100.6 , HORVU7Hr1G044100.7 , HORVU7Hr1G044100.8 , HORVU7Hr1G044100.9 , HORVU6Hr1G086440.8 , HORVU6Hr1G086440.9 , HORVU6Hr1G086440.6 , HORVU6Hr1G086440.7 , HORVU6Hr1G086440.4 , HORVU6Hr1G086440.5 , HORVU6Hr1G086440.2 , HORVU6Hr1G086440.3 , HORVU6Hr1G086440.1 , HORVU7Hr1G044100.18 , HORVU7Hr1G044100.19 , HORVU7Hr1G044100.12 , HORVU7Hr1G044100.13 , HORVU7Hr1G044100.10 , HORVU7Hr1G044100.11 , HORVU7Hr1G044100.16 , HORVU7Hr1G044100.17 , HORVU7Hr1G044100.15
Wheat TraesCS6D02G346400 , TraesCS6D02G346600 , TraesCS6B02G398100 , TraesCS6A02G363500 , TraesCS6A02G363100 , TraesCS6A02G363100 , TraesCS7A02G217300 , TraesCS6D02G346900 , TraesCS6B02G396900 , TraesCS6B02G396700 , TraesCS6B02G397400 , TraesCS6B02G398300 , TraesCS6B02G397300 , TraesCS7D02G218900 , TraesCS6D02G346500 , TraesCS6D02G346500 , TraesCS7D02G219100 , TraesCS6B02G397100 , TraesCS6B02G398200 , TraesCS7A02G217400 , TraesCS6A02G363200 , TraesCS7D02G219000 , TraesCS7B02G048200 , TraesCS5A02G042100 , TraesCS6B02G396800 , TraesCS7B02G124400 , TraesCS6B02G397900
Populus -


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cDNA sequences
Sobic.001G418400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G060633 - -
2 Sobic.004G256200 B-box (BBX) protein(PubMedID : 30626335)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCT/B-box zinc finger protein, putative, expressed -
3 Sobic.005G142000 expressed protein -
4 Sobic.004G250900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@aldehyde dehydrogenase, putative, expressed K00128: aldehyde dehydrogenase (NAD+)
5 Sobic.002G016900 OsFBD13 - F-box and FBD domain containing protein, expressed -
6 Sobic.009G022100 Putative splicing factor(PubMedID : 24356560)@splicing factor, arginine/serine-rich 7, putative, expressed K12896: splicing factor, arginine/serine-rich 7
7 Sobic.002G019600 OsFBX234 - F-box domain containing protein, expressed -
8 Sobic.006G120400 no apical meristem protein, putative, expressed -
9 Sobic.003G035500 hexokinase, putative, expressed K00844: hexokinase
10 Sobic.002G059866 - -
11 Sobic.001G310700 protein kinase family protein, putative, expressed K14500: BR-signaling kinase
12 Sobic.002G103700 - -
13 Sobic.008G015700 major facilitator superfamily antiporter, putative, expressed -
14 Sobic.007G155900 bZIP transcription factor, putative, expressed K14432: ABA responsive element binding factor
15 Sobic.003G244700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
16 Sobic.002G002500 tobamovirus multiplication protein, putative, expressed -
17 Sobic.002G341100 bromodomain domain containing protein, expressed -
18 Sobic.006G203200 Disease resistance/zinc finger/chromosome condensation-like region protein, putative, expressed -
19 Sobic.005G110421 - -
20 Sobic.002G095700 C2-BTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with C2 subfamily conserved sequence, expressed K10523: speckle-type POZ protein


Gene co-expression network
sample Sobic001G418400 Sobic001G418400 Sobic005G060633 Sobic005G060633 Sobic001G418400--Sobic005G060633 Sobic004G256200 Sobic004G256200 Sobic001G418400--Sobic004G256200 Sobic005G142000 Sobic005G142000 Sobic001G418400--Sobic005G142000 Sobic004G250900 Sobic004G250900 Sobic001G418400--Sobic004G250900 Sobic002G016900 Sobic002G016900 Sobic001G418400--Sobic002G016900 Sobic009G022100 Sobic009G022100 Sobic001G418400--Sobic009G022100 Sobic002G019600 Sobic002G019600 Sobic001G418400--Sobic002G019600 Sobic006G120400 Sobic006G120400 Sobic001G418400--Sobic006G120400 Sobic003G035500 Sobic003G035500 Sobic001G418400--Sobic003G035500 Sobic003G266700 Sobic003G266700 Sobic005G060633--Sobic003G266700 Sobic003G351150 Sobic003G351150 Sobic005G060633--Sobic003G351150 Sobic005G060633--Sobic002G019600 Sobic004G132150 Sobic004G132150 Sobic005G060633--Sobic004G132150 Sobic004G317600 Sobic004G317600 Sobic005G060633--Sobic004G317600 Sobic010G101700 Sobic010G101700 Sobic005G060633--Sobic010G101700 Sobic005G060633--Sobic001G418400 Sobic010G164350 Sobic010G164350 Sobic005G060633--Sobic010G164350 Sobic004G121000 Sobic004G121000 Sobic005G060633--Sobic004G121000 Sobic002G341100 Sobic002G341100 Sobic004G256200--Sobic002G341100 Sobic006G261100 Sobic006G261100 Sobic004G256200--Sobic006G261100 Sobic001G116100 Sobic001G116100 Sobic004G256200--Sobic001G116100 Sobic004G256200--Sobic004G250900 Sobic004G256200--Sobic006G120400 Sobic001G218200 Sobic001G218200 Sobic004G256200--Sobic001G218200 Sobic002G276900 Sobic002G276900 Sobic004G256200--Sobic002G276900 Sobic008G073000 Sobic008G073000 Sobic004G256200--Sobic008G073000 Sobic002G095700 Sobic002G095700 Sobic004G256200--Sobic002G095700 Sobic008G165100 Sobic008G165100 Sobic005G142000--Sobic008G165100 Sobic005G142000--Sobic004G256200 Sobic002G351400 Sobic002G351400 Sobic005G142000--Sobic002G351400 Sobic005G142000--Sobic006G120400 Sobic005G142000--Sobic002G341100 Sobic005G142000--Sobic001G418400 Sobic003G244700 Sobic003G244700 Sobic005G142000--Sobic003G244700 Sobic005G142000--Sobic002G019600 Sobic006G123900 Sobic006G123900 Sobic005G142000--Sobic006G123900 Sobic004G028800 Sobic004G028800 Sobic004G250900--Sobic004G028800 Sobic001G488200 Sobic001G488200 Sobic004G250900--Sobic001G488200 Sobic007G097700 Sobic007G097700 Sobic004G250900--Sobic007G097700 Sobic004G345100 Sobic004G345100 Sobic004G250900--Sobic004G345100 Sobic004G250900--Sobic002G276900 Sobic004G250900--Sobic004G256200 Sobic006G096300 Sobic006G096300 Sobic004G250900--Sobic006G096300 Sobic009G025100 Sobic009G025100 Sobic004G250900--Sobic009G025100 Sobic009G009800 Sobic009G009800 Sobic004G250900--Sobic009G009800 Sobic002G059866 Sobic002G059866 Sobic002G016900--Sobic002G059866 Sobic006G203200 Sobic006G203200 Sobic002G016900--Sobic006G203200 Sobic002G253600 Sobic002G253600 Sobic002G016900--Sobic002G253600 Sobic008G156200 Sobic008G156200 Sobic002G016900--Sobic008G156200 Sobic003G174200 Sobic003G174200 Sobic002G016900--Sobic003G174200 Sobic010G270800 Sobic010G270800 Sobic002G016900--Sobic010G270800 Sobic003G022200 Sobic003G022200 Sobic002G016900--Sobic003G022200 Sobic002G016900--Sobic003G244700 Sobic002G016900--Sobic003G035500 Sobic009G022100--Sobic002G095700 Sobic003G433500 Sobic003G433500 Sobic009G022100--Sobic003G433500 Sobic005G030300 Sobic005G030300 Sobic009G022100--Sobic005G030300 Sobic009G192500 Sobic009G192500 Sobic009G022100--Sobic009G192500 Sobic009G022100--Sobic008G073000 Sobic009G022100--Sobic006G261100 Sobic001G469800 Sobic001G469800 Sobic009G022100--Sobic001G469800 Sobic002G362300 Sobic002G362300 Sobic009G022100--Sobic002G362300 Sobic001G371000 Sobic001G371000 Sobic009G022100--Sobic001G371000 Sobic004G005400 Sobic004G005400 Sobic002G019600--Sobic004G005400 Sobic002G019600--Sobic003G244700 Sobic002G062300 Sobic002G062300 Sobic002G019600--Sobic002G062300 Sobic001G261480 Sobic001G261480 Sobic002G019600--Sobic001G261480 Sobic005G139800 Sobic005G139800 Sobic002G019600--Sobic005G139800 Sobic003G031750 Sobic003G031750 Sobic002G019600--Sobic003G031750 Sobic005G117801 Sobic005G117801 Sobic002G019600--Sobic005G117801 Sobic009G209800 Sobic009G209800 Sobic002G019600--Sobic009G209800 Sobic008G079100 Sobic008G079100 Sobic002G019600--Sobic008G079100 Sobic009G242800 Sobic009G242800 Sobic006G120400--Sobic009G242800 Sobic006G120400--Sobic002G341100 Sobic006G120400--Sobic006G203200 Sobic007G155900 Sobic007G155900 Sobic006G120400--Sobic007G155900 Sobic008G015700 Sobic008G015700 Sobic006G120400--Sobic008G015700 Sobic008G106000 Sobic008G106000 Sobic006G120400--Sobic008G106000 Sobic007G043500 Sobic007G043500 Sobic006G120400--Sobic007G043500 Sobic006G120400--Sobic004G256200 Sobic002G001600 Sobic002G001600 Sobic006G120400--Sobic002G001600 Sobic001G033400 Sobic001G033400 Sobic003G035500--Sobic001G033400 Sobic003G035500--Sobic008G156200 Sobic007G078300 Sobic007G078300 Sobic003G035500--Sobic007G078300 Sobic010G189100 Sobic010G189100 Sobic003G035500--Sobic010G189100 Sobic002G247300 Sobic002G247300 Sobic003G035500--Sobic002G247300 Sobic010G207400 Sobic010G207400 Sobic003G035500--Sobic010G207400 Sobic003G035500--Sobic003G174200 Sobic003G412200 Sobic003G412200 Sobic003G035500--Sobic003G412200 Sobic007G091200 Sobic007G091200 Sobic003G035500--Sobic007G091200
Octagon: transcription factors


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